Dbfetch

LOCUS       XM_006343832             845 bp    mRNA    linear   PLN 04-APR-2025
DEFINITION  PREDICTED: Solanum tuberosum SUMO-conjugating enzyme UBC9-like
            (LOC102599342), mRNA.
ACCESSION   XM_006343832
VERSION     XM_006343832.2
DBLINK      BioProject: PRJNA225997
KEYWORDS    RefSeq.
SOURCE      Solanum tuberosum (potato)
  ORGANISM  Solanum tuberosum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; lamiids; Solanales; Solanaceae;
            Solanoideae; Solaneae; Solanum.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_006238976.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Jan 5, 2016 this sequence version replaced XM_006343832.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000226075.1-RS_2025_04
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 04/03/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..845
                     /organism="Solanum tuberosum"
                     /mol_type="mRNA"
                     /cultivar="DM 1-3 516 R44"
                     /db_xref="taxon:4113"
                     /chromosome="Unknown"
     gene            1..845
                     /gene="LOC102599342"
                     /note="SUMO-conjugating enzyme UBC9-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 35 ESTs, 80 Proteins, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     95 samples with support for all annotated introns"
                     /db_xref="GeneID:102599342"
     CDS             125..571
                     /gene="LOC102599342"
                     /codon_start=1
                     /product="SUMO-conjugating enzyme UBC9-like"
                     /protein_id="XP_006343894.1"
                     /db_xref="GeneID:102599342"
                     /translation="MASKRILKELKDLQKDPPTSCSAGPVGEDMFHWQATIMGPPDCP
                     YTGGLFLITIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKV
                     LLSICSLLTDPNPDDPLVPEIAHMYKTDRNKYETTARSWTQKYAMG"
ORIGIN      
        1 ataccaaaag ccattttttt atatatatat atataaataa ctgttctcag ttcaaagcaa
       61 aaactctttt cacttctcag aatcggaaac tttgtaggag gatctctcag ggatttagtc
      121 ggcgatggcg tccaagcgga ttctgaaaga gctcaaggat ctgcagaaag atcctcctac
      181 ttcttgcagt gctggcccag ttggcgaaga tatgttccac tggcaagcaa caattatggg
      241 tccacctgac tgtccctaca ccggtggact gtttctcatt accattcatt ttccacctga
      301 ttatccattt aagccaccca aggttgcttt taggacaaag gttttccacc cgaacatcaa
      361 cagcaatggt agtatttgcc ttgacattct gaaggagcag tggagcccag ctcttactat
      421 ctccaaggtg ttgctgtcca tctgttctct gctaacagac cctaatcctg atgacccttt
      481 ggtgccggag attgctcata tgtacaagac tgatcgaaac aagtatgaaa caactgctcg
      541 gagctggacc caaaagtatg ccatgggtta gtcgctgttg cgatgcatct atagagggtc
      601 tcctttccct ctgtgttttt gggcattatc agtaatgtgt ttagatatga agtgtttctt
      661 atggcttaat gggaacagtt gtgtttttgt ctcttgaaac acaaaacttt gccttttggt
      721 ttgtaaaatc caacggttat gctactctat ggataggtca aaattaagca gtttgaccat
      781 tttgtatgtg aatgaaaact ctatgaagat gtttcctttg aatatgaatg gtttcattca
      841 ttttt
//