Dbfetch
LOCUS NM_167275 2676 bp mRNA linear INV 26-DEC-2023 DEFINITION Drosophila melanogaster uncharacterized protein (CG32668), partial mRNA. ACCESSION NM_167275 VERSION NM_167275.2 DBLINK BioProject: PRJNA164 BioSample: SAMN02803731 KEYWORDS RefSeq. SOURCE Drosophila melanogaster (fruit fly) ORGANISM Drosophila melanogaster Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. REFERENCE 1 (bases 1 to 2676) AUTHORS Matthews,B.B., Dos Santos,G., Crosby,M.A., Emmert,D.B., St Pierre,S.E., Gramates,L.S., Zhou,P., Schroeder,A.J., Falls,K., Strelets,V., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data JOURNAL G3 (Bethesda) 5 (8), 1721-1736 (2015) PUBMED 26109357 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 2676) AUTHORS Crosby,M.A., Gramates,L.S., Dos Santos,G., Matthews,B.B., St Pierre,S.E., Zhou,P., Schroeder,A.J., Falls,K., Emmert,D.B., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: The Rule-Benders JOURNAL G3 (Bethesda) 5 (8), 1737-1749 (2015) PUBMED 26109356 REMARK Publication Status: Online-Only REFERENCE 3 (bases 1 to 2676) AUTHORS Hoskins,R.A., Carlson,J.W., Wan,K.H., Park,S., Mendez,I., Galle,S.E., Booth,B.W., Pfeiffer,B.D., George,R.A., Svirskas,R., Krzywinski,M., Schein,J., Accardo,M.C., Damia,E., Messina,G., Mendez-Lago,M., de Pablos,B., Demakova,O.V., Andreyeva,E.N., Boldyreva,L.V., Marra,M., Carvalho,A.B., Dimitri,P., Villasante,A., Zhimulev,I.F., Rubin,G.M., Karpen,G.H. and Celniker,S.E. TITLE The Release 6 reference sequence of the Drosophila melanogaster genome JOURNAL Genome Res 25 (3), 445-458 (2015) PUBMED 25589440 REFERENCE 4 (bases 1 to 2676) AUTHORS Hoskins,R.A., Carlson,J.W., Kennedy,C., Acevedo,D., Evans-Holm,M., Frise,E., Wan,K.H., Park,S., Mendez-Lago,M., Rossi,F., Villasante,A., Dimitri,P., Karpen,G.H. and Celniker,S.E. TITLE Sequence finishing and mapping of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1625-1628 (2007) PUBMED 17569867 REFERENCE 5 (bases 1 to 2676) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. TITLE The Release 5.1 annotation of Drosophila melanogaster heterochromatin JOURNAL Science 316 (5831), 1586-1591 (2007) PUBMED 17569856 REMARK Erratum:[Science. 2007 Sep 7;317(5843):1325] REFERENCE 6 (bases 1 to 2676) AUTHORS Quesneville,H., Bergman,C.M., Andrieu,O., Autard,D., Nouaud,D., Ashburner,M. and Anxolabehere,D. TITLE Combined evidence annotation of transposable elements in genome sequences JOURNAL PLoS Comput Biol 1 (2), 166-175 (2005) PUBMED 16110336 REFERENCE 7 (bases 1 to 2676) AUTHORS Hoskins,R.A., Smith,C.D., Carlson,J.W., Carvalho,A.B., Halpern,A., Kaminker,J.S., Kennedy,C., Mungall,C.J., Sullivan,B.A., Sutton,G.G., Yasuhara,J.C., Wakimoto,B.T., Myers,E.W., Celniker,S.E., Rubin,G.M. and Karpen,G.H. TITLE Heterochromatic sequences in a Drosophila whole-genome shotgun assembly JOURNAL Genome Biol 3 (12), RESEARCH0085 (2002) PUBMED 12537574 REFERENCE 8 (bases 1 to 2676) AUTHORS Kaminker,J.S., Bergman,C.M., Kronmiller,B., Carlson,J., Svirskas,R., Patel,S., Frise,E., Wheeler,D.A., Lewis,S.E., Rubin,G.M., Ashburner,M. and Celniker,S.E. TITLE The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective JOURNAL Genome Biol 3 (12), RESEARCH0084 (2002) PUBMED 12537573 REFERENCE 9 (bases 1 to 2676) AUTHORS Misra,S., Crosby,M.A., Mungall,C.J., Matthews,B.B., Campbell,K.S., Hradecky,P., Huang,Y., Kaminker,J.S., Millburn,G.H., Prochnik,S.E., Smith,C.D., Tupy,J.L., Whitfied,E.J., Bayraktaroglu,L., Berman,B.P., Bettencourt,B.R., Celniker,S.E., de Grey,A.D., Drysdale,R.A., Harris,N.L., Richter,J., Russo,S., Schroeder,A.J., Shu,S.Q., Stapleton,M., Yamada,C., Ashburner,M., Gelbart,W.M., Rubin,G.M. and Lewis,S.E. TITLE Annotation of the Drosophila melanogaster euchromatic genome: a systematic review JOURNAL Genome Biol 3 (12), RESEARCH0083 (2002) PUBMED 12537572 REFERENCE 10 (bases 1 to 2676) AUTHORS Celniker,S.E., Wheeler,D.A., Kronmiller,B., Carlson,J.W., Halpern,A., Patel,S., Adams,M., Champe,M., Dugan,S.P., Frise,E., Hodgson,A., George,R.A., Hoskins,R.A., Laverty,T., Muzny,D.M., Nelson,C.R., Pacleb,J.M., Park,S., Pfeiffer,B.D., Richards,S., Sodergren,E.J., Svirskas,R., Tabor,P.E., Wan,K., Stapleton,M., Sutton,G.G., Venter,C., Weinstock,G., Scherer,S.E., Myers,E.W., Gibbs,R.A. and Rubin,G.M. TITLE Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence JOURNAL Genome Biol 3 (12), RESEARCH0079 (2002) PUBMED 12537568 REFERENCE 11 (bases 1 to 2676) AUTHORS Adams,M.D., Celniker,S.E., Holt,R.A., Evans,C.A., Gocayne,J.D., Amanatides,P.G., Scherer,S.E., Li,P.W., Hoskins,R.A., Galle,R.F., George,R.A., Lewis,S.E., Richards,S., Ashburner,M., Henderson,S.N., Sutton,G.G., Wortman,J.R., Yandell,M.D., Zhang,Q., Chen,L.X., Brandon,R.C., Rogers,Y.H., Blazej,R.G., Champe,M., Pfeiffer,B.D., Wan,K.H., Doyle,C., Baxter,E.G., Helt,G., Nelson,C.R., Gabor,G.L., Abril,J.F., Agbayani,A., An,H.J., Andrews-Pfannkoch,C., Baldwin,D., Ballew,R.M., Basu,A., Baxendale,J., Bayraktaroglu,L., Beasley,E.M., Beeson,K.Y., Benos,P.V., Berman,B.P., Bhandari,D., Bolshakov,S., Borkova,D., Botchan,M.R., Bouck,J., Brokstein,P., Brottier,P., Burtis,K.C., Busam,D.A., Butler,H., Cadieu,E., Center,A., Chandra,I., Cherry,J.M., Cawley,S., Dahlke,C., Davenport,L.B., Davies,P., de Pablos,B., Delcher,A., Deng,Z., Mays,A.D., Dew,I., Dietz,S.M., Dodson,K., Doup,L.E., Downes,M., Dugan-Rocha,S., Dunkov,B.C., Dunn,P., Durbin,K.J., Evangelista,C.C., Ferraz,C., Ferriera,S., Fleischmann,W., Fosler,C., Gabrielian,A.E., Garg,N.S., Gelbart,W.M., Glasser,K., Glodek,A., Gong,F., Gorrell,J.H., Gu,Z., Guan,P., Harris,M., Harris,N.L., Harvey,D., Heiman,T.J., Hernandez,J.R., Houck,J., Hostin,D., Houston,K.A., Howland,T.J., Wei,M.H., Ibegwam,C., Jalali,M., Kalush,F., Karpen,G.H., Ke,Z., Kennison,J.A., Ketchum,K.A., Kimmel,B.E., Kodira,C.D., Kraft,C., Kravitz,S., Kulp,D., Lai,Z., Lasko,P., Lei,Y., Levitsky,A.A., Li,J., Li,Z., Liang,Y., Lin,X., Liu,X., Mattei,B., McIntosh,T.C., McLeod,M.P., McPherson,D., Merkulov,G., Milshina,N.V., Mobarry,C., Morris,J., Moshrefi,A., Mount,S.M., Moy,M., Murphy,B., Murphy,L., Muzny,D.M., Nelson,D.L., Nelson,D.R., Nelson,K.A., Nixon,K., Nusskern,D.R., Pacleb,J.M., Palazzolo,M., Pittman,G.S., Pan,S., Pollard,J., Puri,V., Reese,M.G., Reinert,K., Remington,K., Saunders,R.D., Scheeler,F., Shen,H., Shue,B.C., Siden-Kiamos,I., Simpson,M., Skupski,M.P., Smith,T., Spier,E., Spradling,A.C., Stapleton,M., Strong,R., Sun,E., Svirskas,R., Tector,C., Turner,R., Venter,E., Wang,A.H., Wang,X., Wang,Z.Y., Wassarman,D.A., Weinstock,G.M., Weissenbach,J., Williams,S.M., WoodageT, Worley,K.C., Wu,D., Yang,S., Yao,Q.A., Ye,J., Yeh,R.F., Zaveri,J.S., Zhan,M., Zhang,G., Zhao,Q., Zheng,L., Zheng,X.H., Zhong,F.N., Zhong,W., Zhou,X., Zhu,S., Zhu,X., Smith,H.O., Gibbs,R.A., Myers,E.W., Rubin,G.M. and Venter,J.C. TITLE The genome sequence of Drosophila melanogaster JOURNAL Science 287 (5461), 2185-2195 (2000) PUBMED 10731132 REFERENCE 12 (bases 1 to 2676) AUTHORS Celniker,S., Carlson,J., Wan,K., Pfeiffer,B., Frise,E., George,R., Hoskins,R., Stapleton,M., Pacleb,J., Park,S., Svirskas,R., Smith,E., Yu,C. and Rubin,G. CONSRTM Berkeley Drosophila Genome Project TITLE Drosophila melanogaster release 4 sequence JOURNAL Unpublished REFERENCE 13 (bases 1 to 2676) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (20-DEC-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 14 (bases 1 to 2676) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (13-DEC-2023) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 15 (bases 1 to 2676) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (19-OCT-2022) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 16 (bases 1 to 2676) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (20-APR-2020) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 17 (bases 1 to 2676) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (22-APR-2019) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 18 (bases 1 to 2676) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (24-MAY-2018) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 19 (bases 1 to 2676) CONSRTM FlyBase TITLE Direct Submission JOURNAL Submitted (07-DEC-2016) FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, Cambridge, MA 02138, USA REFERENCE 20 (bases 1 to 2676) AUTHORS Celniker,S., Carlson,J., Kennedy,C., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Karpen,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One #Cyclotron RoadOne Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 21 (bases 1 to 2676) AUTHORS Celniker,S., Carlson,J., Wan,K., Frise,E., Hoskins,R., Park,S., Svirskas,R. and Rubin,G. TITLE Direct Submission JOURNAL Submitted (10-AUG-2006) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA REMARK Direct Submission REFERENCE 22 (bases 1 to 2676) AUTHORS Smith,C.D., Shu,S., Mungall,C.J. and Karpen,G.H. CONSRTM Drosophila Heterochromatin Genome Project TITLE Direct Submission JOURNAL Submitted (01-AUG-2006) Drosophila Heterochromatin Genome Project, Ernest Orlando Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Mailstop 64-121, Berkeley, CA 94720, USA REFERENCE 23 (bases 1 to 2676) AUTHORS Adams,M.D., Celniker,S.E., Gibbs,R.A., Rubin,G.M. and Venter,C.J. TITLE Direct Submission JOURNAL Submitted (21-MAR-2000) Celera Genomics, 45 West Gude Drive, Rockville, MD 20850, USA COMMENT REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NC_004354). On Jul 15, 2014 this sequence version replaced NM_167275.1. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.54 URL :: http://flybase.org ##Genome-Annotation-Data-END## COMPLETENESS: incomplete on the 5' end. FEATURES Location/Qualifiers source 1..2676 /organism="Drosophila melanogaster" /mol_type="mRNA" /db_xref="taxon:7227" /chromosome="X" /genotype="y[1]; Gr22b[1] Gr22d[1] cn[1] CG33964[R4.2] bw[1] sp[1]; LysC[1] MstProx[1] GstD5[1] Rh6[1]" gene <1..2676 /gene="CG32668" /locus_tag="Dmel_CG32668" /gene_synonym="Dmel\CG32668" /map="10A8-10A8" /db_xref="FLYBASE:FBgn0052668" /db_xref="GeneID:318147" CDS 1..2592 /gene="CG32668" /locus_tag="Dmel_CG32668" /gene_synonym="Dmel\CG32668" /note="CG32668 gene product from transcript CG32668-RA; CG32668-PA" /codon_start=1 /product="uncharacterized protein" /protein_id="NP_727502.1" /db_xref="FLYBASE:FBpp0073325" /db_xref="GeneID:318147" /db_xref="FLYBASE:FBgn0052668" /translation="MSLLLRRRSRSETRPQANPAEMAKQPADSDKSDRQQQLAKHHQM RHHQPHASEQSLNKLGLVSSGTSGMGRRKTSAELISEAKMFLGESVNAVPLLATGGAR LVSTRRPITPRESGRVLYGKVALAGRPPSAFSMRYLQNEKPSTPRQLPALSGSVSATP MPTRNGALLCQSSTETLIELLKQHSGLKDCSDETVQHINAILQELYTRVRKQERNYKR GFILGGLYGLVECTSPRVLLAVARVVLALRVTGSNLTGACKLIFKVARHEQHDALFHE HDVLELLIDGLGHASPLDEPEACIYAYGCIRFLTASSAQERDDALNRNWIGLETSGES QSLPIPALMPPALSAISTSLCPRKLTGQQTLVSRLARHGAVELMILHLQMLNEAGATK RLQGPPLHTLYQLSAAMRALADVSQQQQRLQLQLQLACPHLIRAAEVSMGELEVQANV VRTLSVLSEDSDCCETLHNYAARIGLLLGPSCAGGGQWSERLLAVLSRLGYMLGNILA KHESARIQYFHNDVAMEYLLNVLEQLNERSPSSVAHLDAQIKLIRVVANMSVNPEVGA GLGNVRSLGAVLLQLLSKTSEELTKKKSPEQQELLHATLGALHNLCFYQDKQAAVQPL AEGSLQSLIDDLSASLAKVLGNCQTSVTKVELARVLGNLTRNEQARRCFCAAGGLPLM VQQLTKQAAGQDYELRTCAIGVLVNLLGDGEQRGPFLQLRGAELLSLLLRGSLEQEDW FLANIVCQALWNLLIDGHCAANLCQSSNILDEVSDLLADYLDEDRLSPGDDDNDNDED DPEREAEDLDASDTDPEAHDALWEDFALVATDLLERIQNNFDRQQQSLPQNADNEDDN DVFIEEM" ORIGIN 1 atgagtttgc tattgaggcg acgttcgcgc agcgagacac gtcctcaggc gaatccggcg 61 gagatggcca agcagccggc ggactcggac aaatcggaca ggcagcagca gctggcgaag 121 caccaccaga tgcgccacca ccagccgcat gccagtgaac aaagtctaaa caaactgggc 181 ctggtttcca gtggcaccag tggaatgggc agacgcaaga catccgcgga actcataagt 241 gaggccaaga tgttcctcgg cgaatcggtg aacgccgttc cactcttggc caccggtggt 301 gctcgtttgg tcagcactcg acgacccatt acgccccgtg aatccggacg agttttgtac 361 ggcaaagttg ccctggctgg gcggccacca agtgcctttt ccatgcgtta tctgcaaaac 421 gagaaaccat cgacgccccg ccagttgccg gctctatcgg gttccgtatc cgccacaccc 481 atgcccaccc ggaatggagc tctgctctgt caatccagca ctgaaacact gatcgaactg 541 ctcaagcagc acagtggttt gaaggattgt agcgacgaga cagtgcagca cattaatgcg 601 atcctccagg agctttatac acgcgtgaga aagcaggagc gcaactacaa gcgtggcttc 661 atcctaggag gactctacgg tttggtggaa tgcacttcac cacgcgtcct tttggccgtg 721 gctcgcgtgg ttttggctct tcgggtgacg ggcagtaatc tcacgggtgc ctgcaagctg 781 atcttcaagg tggccaggca cgagcagcat gacgcccttt ttcacgaaca cgacgtgctg 841 gagctgctca tcgatggttt gggacacgct tcgccactgg atgagccaga ggcttgcatt 901 tatgcctatg gttgcatacg cttcctgacc gccagcagtg cccaggagcg cgatgatgcc 961 ctcaaccgca attggattgg tttggagacc tccggcgaaa gtcaatcgct ccccattcct 1021 gctctaatgc ctcccgctct atcggccata tcgacttcgc tgtgtcccag gaaattgacg 1081 ggtcagcaaa cgttggtgtc ccgcctggct cgccatggcg ccgtggagct gatgatcctg 1141 cacctgcaga tgttgaatga ggcgggagcc accaaacgct tacagggtcc accgctacac 1201 actctctatc aactgtcggc ggccatgagg gctctggcag atgtttccca gcaacagcag 1261 cgtctgcagc tccaactgca attggcatgt ccacatctca ttcgagcggc cgaggtatcc 1321 atgggcgaac tggaggtcca agccaatgtg gtgcgcacac tcagtgtgct ctcggaggac 1381 tctgattgct gtgaaacgct gcacaactat gctgccagaa ttggcctgct cctgggtccc 1441 tcgtgtgccg gaggtgggca gtggagtgaa cgtctcttgg cggttctaag tcgtttgggc 1501 tacatgctgg gcaatatact ggccaaacac gaatccgcgc gcatacagta ctttcacaac 1561 gatgtggcca tggagtatct tctaaatgtc ctggaacagc tgaacgaacg ctcacccagc 1621 agtgtggccc atttggatgc tcaaatcaag ttaatacgag tggtggccaa tatgagtgta 1681 aatccggagg tgggcgcagg cttgggcaat gtccgttctt tgggcgccgt gctgctgcag 1741 cttttaagca agaccagcga ggagttgacc aagaagaagt cgccggaaca gcaggagctt 1801 ctgcatgcca ccttgggagc cctgcacaat ctgtgcttct accaggacaa acaggcagct 1861 gtgcagccgt tggccgaggg atctctgcag agtctgatcg acgatctgtc cgcctcgttg 1921 gccaaggtgt tgggcaactg tcagacgtcg gtgaccaaag tggagctggc ccgtgtgtta 1981 ggtaacctta cgaggaacga gcaggcgcgt cgttgtttct gtgccgccgg tggattgcca 2041 ctgatggttc agcaactgac gaagcaggca gctggccagg attatgagct gcgcacctgt 2101 gccattggtg tcctggtgaa cctcttgggc gatggcgaac agcgaggtcc ctttctgcaa 2161 ctgcgcggtg ccgagctgct gtcgctactg ctgcgtggat ccctggagca ggaggattgg 2221 tttctggcca acattgtttg ccaggccctc tggaatcttc tcatcgacgg ccattgtgcg 2281 gcaaatctct gccagagtag taatatactc gatgaagtaa gtgatctgct ggccgattat 2341 ctcgatgagg atcgattatc acccggcgat gacgataacg ataacgacga ggatgatccg 2401 gaacgggaag ctgaggattt ggatgcatcg gatacggatc cggaagcgca cgatgccttg 2461 tgggaggatt tcgcactggt cgccactgat ttgctagaac gcatccaaaa caacttcgat 2521 aggcagcagc aatcgctacc ccaaaatgcc gataacgaag atgataacga tgtatttatc 2581 gaggaaatgt agtatcagtt cgtttaatag tttttagtgt ttctatgtgg tttgcatcat 2641 tattcgataa atatcttaaa acaaattatt aaagcc //