Dbfetch
LOCUS NM_112777 1493 bp mRNA linear PLN 20-OCT-2022 DEFINITION Arabidopsis thaliana EIN2 targeting protein2 (ETP2), mRNA. ACCESSION NM_112777 VERSION NM_112777.4 DBLINK BioProject: PRJNA116 BioSample: SAMN03081427 KEYWORDS RefSeq. SOURCE Arabidopsis thaliana (thale cress) ORGANISM Arabidopsis thaliana Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis. REFERENCE 1 (bases 1 to 1493) AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M., Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B., Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P., Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V., Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S., Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P., Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S., Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H., Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M., Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A., Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C., Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P., Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M., Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S., Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L., Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A., Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B., Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J., Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X., Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M., Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S., Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C., Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S., Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A., Yamada,M., Yasuda,M. and Tabata,S. CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium; Institute for Genomic Research; Kazusa DNA Research Institute TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana JOURNAL Nature 408 (6814), 820-822 (2000) PUBMED 11130713 REFERENCE 2 (bases 1 to 1493) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (19-OCT-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 1493) AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M., Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R., Vaughn,M. and Town,C.D. TITLE Direct Submission JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute, 9704 Medical Center Dr, Rockville, MD 20850, USA REMARK Protein update by submitter REFERENCE 4 (bases 1 to 1493) AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E. CONSRTM TAIR TITLE Direct Submission JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie Institution, 260 Panama Street, Stanford, CA, USA COMMENT REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003074). On Sep 12, 2016 this sequence version replaced NM_112777.3. FEATURES Location/Qualifiers source 1..1493 /organism="Arabidopsis thaliana" /mol_type="mRNA" /db_xref="taxon:3702" /chromosome="3" /ecotype="Columbia" gene 1..1493 /gene="ETP2" /locus_tag="AT3G18910" /gene_synonym="EIN2 targeting protein2" /db_xref="Araport:AT3G18910" /db_xref="GeneID:821424" /db_xref="TAIR:AT3G18910" CDS 192..1358 /gene="ETP2" /locus_tag="AT3G18910" /gene_synonym="EIN2 targeting protein2" /inference="Similar to RNA sequence, EST:INSD:EL198590.1,INSD:ES182690.1,INSD:CB257562.1, INSD:BP863013.1,INSD:EL233146.1,INSD:EL970015.1, INSD:AI998303.1,INSD:AV548934.1,INSD:AV557508.1, INSD:AV556027.1" /inference="Similar to RNA sequence, mRNA:INSD:AK175224.1,INSD:BT012550.1,INSD:BX822874.1" /note="EIN2 targeting protein2 (ETP2); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated domain, type 1 (InterPro:IPR006527), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box and associated interaction domains-containing protein (TAIR:AT3G19410.1); Has 1424 Blast hits to 1375 proteins in 38 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1422; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink)." /codon_start=1 /product="EIN2 targeting protein2" /protein_id="NP_188521.1" /db_xref="GeneID:821424" /db_xref="TAIR:AT3G18910" /db_xref="Araport:AT3G18910" /translation="MKTIQEQLPNDLVEEILCRVPATSLRRLRSTCKAWNRLFKGDRI LASKHFEKSAKQFRSLSLRNDYRIFPISFNLHGNSPSLELKSELIDPHSKNSAAPFEI SRVIHCEGLLLCSSQLDESRVVVWNPLTGETRWIRTGDFRQKGRSFDVGYYYQKDKRS WIKSYKLLCYYRGTKYFEIYDFDSDSWRILDDIIAPRGSIGYSELSVSLKGNTYWFAK GVTEERPRTISLLKFDFYTEKSVPVLLPYQSRRLFQASSLSVVREDKLSVLLQLDQSS KTEIWVTNVIDETTKGAVSWTKVLALDLSPHLQIGNDGSFFLGEDKKVVMFCEKLIDE NKVKDMVYIVGEDNVVTEVGFGVDEMDGCRAVILNYVPSLVQIERAGGNRKRGH" ORIGIN 1 aagaaattca atgctcaata tgatctcatg ggaacgaaac aggggaaatt tgattgccac 61 aaatatatgg gcttttaaag tgggccttgt tagattctta tcaggtccat gtcactcact 121 attcaacatt ttactgctga actcaactgt gggaagagga aaccctagag atttggtaac 181 agcagagatc aatgaagaca atacaggagc agcttccaaa tgacttggta gaggagatac 241 tctgtcgcgt tccggcaaca tctctgagac gtttacgatc gacttgcaaa gcatggaacc 301 gtttattcaa aggtgatcgg atattagcaa gtaagcattt tgaaaaatcc gcaaaacagt 361 ttagatctct atcgttaagg aatgattaca ggatttttcc gattagcttc aatctccatg 421 gaaatagtcc atctctagag cttaaaagtg agctaatcga tcctcattct aagaattcag 481 ctgctccatt cgaaatatct cgagtcattc actgtgaggg attgttgttg tgctcctccc 541 aattggacga atctagagtc gtggtttgga atcctttaac cggtgaaacc aggtggatca 601 gaaccggcga ttttcgccaa aaaggccgta gctttgatgt cgggtactac taccaaaaag 661 acaagagatc ctggatcaag agctacaaac tcttgtgcta ttatcgtggt accaaatatt 721 ttgaaatcta cgattttgac tctgattcat ggaggattct tgatgatatt atcgctccac 781 gggggagtat tggatactcg gaacttagcg tgtctctgaa aggaaatact tactggttcg 841 ctaaaggtgt aacagaagag cggccccgca ccatatcatt gctcaaattt gatttttata 901 cagagaaatc tgtacctgtg cttcttccct atcagagtcg tcgtcttttc caagctagta 961 gcctttctgt tgttagagaa gataaacttt ctgtgttatt gcagctagat caaagttcca 1021 agactgagat atgggtgaca aatgtgattg atgagaccac caaaggagca gtttcttgga 1081 ccaaggtctt agcattggat ttgagccctc atcttcagat tgggaatgat ggaagtttct 1141 tcctaggcga ggataagaaa gtcgtcatgt tctgtgagaa attgattgat gagaacaagg 1201 tcaaagacat ggtctacatt gttggggagg ataatgttgt cacagaagtg ggatttggag 1261 tagatgaaat ggatggatgt cgggcagtta ttcttaatta tgttccaagt ttggttcaaa 1321 tcgagcgagc tggaggcaac aggaaaagag ggcactaaac actgtctaca tgtaatctct 1381 tttctttctg tgcgtgtgtt tctcttaatt ttatctttgt catgttcttt cagtatcaat 1441 caagcttttc taattcaatg aaaaaagtga ttcagaaaac atgtaagaag ctt //