Dbfetch
LOCUS NM_001333719 1563 bp mRNA linear PLN 20-OCT-2022 DEFINITION Arabidopsis thaliana RING/U-box superfamily protein (AT1G55530), mRNA. ACCESSION NM_001333719 VERSION NM_001333719.1 DBLINK BioProject: PRJNA116 BioSample: SAMN03081427 KEYWORDS RefSeq. SOURCE Arabidopsis thaliana (thale cress) ORGANISM Arabidopsis thaliana Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis. REFERENCE 1 (bases 1 to 1563) AUTHORS Theologis,A., Ecker,J.R., Palm,C.J., Federspiel,N.A., Kaul,S., White,O., Alonso,J., Altafi,H., Araujo,R., Bowman,C.L., Brooks,S.Y., Buehler,E., Chan,A., Chao,Q., Chen,H., Cheuk,R.F., Chin,C.W., Chung,M.K., Conn,L., Conway,A.B., Conway,A.R., Creasy,T.H., Dewar,K., Dunn,P., Etgu,P., Feldblyum,T.V., Feng,J., Fong,B., Fujii,C.Y., Gill,J.E., Goldsmith,A.D., Haas,B., Hansen,N.F., Hughes,B., Huizar,L., Hunter,J.L., Jenkins,J., Johnson-Hopson,C., Khan,S., Khaykin,E., Kim,C.J., Koo,H.L., Kremenetskaia,I., Kurtz,D.B., Kwan,A., Lam,B., Langin-Hooper,S., Lee,A., Lee,J.M., Lenz,C.A., Li,J.H., Li,Y., Lin,X., Liu,S.X., Liu,Z.A., Luros,J.S., Maiti,R., Marziali,A., Militscher,J., Miranda,M., Nguyen,M., Nierman,W.C., Osborne,B.I., Pai,G., Peterson,J., Pham,P.K., Rizzo,M., Rooney,T., Rowley,D., Sakano,H., Salzberg,S.L., Schwartz,J.R., Shinn,P., Southwick,A.M., Sun,H., Tallon,L.J., Tambunga,G., Toriumi,M.J., Town,C.D., Utterback,T., Van Aken,S., Vaysberg,M., Vysotskaia,V.S., Walker,M., Wu,D., Yu,G., Fraser,C.M., Venter,J.C. and Davis,R.W. TITLE Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana JOURNAL Nature 408 (6814), 816-820 (2000) PUBMED 11130712 REFERENCE 2 (bases 1 to 1563) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (19-OCT-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 1563) AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M., Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R., Vaughn,M. and Town,C.D. TITLE Direct Submission JOURNAL Submitted (18-JUL-2017) Plant Genomics, J. Craig Venter Institute, 9704 Medical Center Dr, Rockville, MD 20850, USA REMARK Protein update by submitter REFERENCE 4 (bases 1 to 1563) AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M., Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R., Vaughn,M. and Town,C.D. TITLE Direct Submission JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute, 9704 Medical Center Dr, Rockville, MD 20850, USA REMARK Protein update by submitter REFERENCE 5 (bases 1 to 1563) AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E. CONSRTM TAIR TITLE Direct Submission JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie Institution, 260 Panama Street, Stanford, CA, USA COMMENT REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003070). FEATURES Location/Qualifiers source 1..1563 /organism="Arabidopsis thaliana" /mol_type="mRNA" /db_xref="taxon:3702" /chromosome="1" /ecotype="Columbia" gene 1..1563 /locus_tag="AT1G55530" /gene_synonym="T5A14.7; T5A14_7" /db_xref="Araport:AT1G55530" /db_xref="GeneID:842000" /db_xref="TAIR:AT1G55530" CDS 311..1267 /locus_tag="AT1G55530" /gene_synonym="T5A14.7; T5A14_7" /codon_start=1 /product="RING/U-box superfamily protein" /protein_id="NP_001321433.1" /db_xref="Araport:AT1G55530" /db_xref="GeneID:842000" /db_xref="TAIR:AT1G55530" /translation="MEEAVVTRYWCHMCSQTVNPVMEAEIKCPFCQSGFVEEMEDDDD HDSSDPADVRANNSLWAPILMELMNDPVRRRRNQSVESVEDNQNEVQTENNEDDGEND LDWQLQEILRRRRRHSAAVLQLLQGIRAGLSVESESTGNGGDYFIGPGFEMLLQRLAE NDPNRYGTPPAKKEAVEALATVKIEETLQCSVCLDDFEIGTEAKLMPCTHKFHSDCLL PWLELHSSCPVCRYQLPADEAKTDSVTTTSDNNGSSSASATTSHGAENSDGNRRQEEE EEEEEEEEEENENNDGSGFSIPWPFSTLFSSSQDSNAPTDSS" ORIGIN 1 aagaataaga cccacagaga gaaaagaaat gagaaaccca gaaggatctg gaagaagagg 61 aggatccttt tcattttttc tttcttggat aaactctctc ctatcttttt ttttttcttt 121 tcttcttcta cttttctaat ttcttacgac aattctcctc ctttcgtaca taaaacaaag 181 aaaccctctc tttttctcat cttcttcaat tttcaaaact caaaatcctt cttcatcgtc 241 gctacatttt tctgtgcttc tcggtttctg ctatcgaaca acaagactca aaaggtagaa 301 agaatcggac atggaagaag cagttgtaac gaggtattgg tgtcatatgt gttctcaaac 361 tgtgaatcca gtcatggaag ctgagatcaa atgtcccttt tgtcaaagtg ggtttgttga 421 agaaatggaa gatgacgacg atcatgattc ttctgatccg gctgatgtta gagcaaacaa 481 ctctctttgg gcgcctatct tgatggaact tatgaatgat cctgtgcgtc gtaggagaaa 541 ccagagtgtt gagtctgttg aagataatca aaacgaggta cagaccgaga acaatgaaga 601 cgatggagaa aatgatttgg attggcagct tcaagagatt ctcaggagaa ggagaagaca 661 ttccgctgct gttttgcagt tgcttcaggg gatacgagca gggttgtctg tagaatctga 721 gagtactggt aatggaggtg actatttcat tggtcctgga tttgaaatgt tgcttcaacg 781 tctagctgag aatgatccca acagatatgg aacacctcct gctaaaaaag aagctgtcga 841 ggctttggct actgtgaaaa tcgaagagac tctgcaatgt tcggtttgtt tagatgattt 901 tgagattgga actgaggcaa agctgatgcc ctgtacgcac aagtttcata gtgactgctt 961 gttaccatgg cttgagcttc acagttcatg cccggtttgc agatatcagt tacctgcaga 1021 tgaagccaag actgattcag taacaacaac gagcgataac aatggaagca gtagtgcttc 1081 tgctacaacc agccatggag ctgagaacag cgatggaaac cggcgccaag aagaagaaga 1141 agaagaagaa gaggaggagg aggaggagaa cgagaacaat gacggaagcg gattctcgat 1201 cccgtggccg tttagcacct tgttctcctc gtcgcaagat agcaatgcac caacggattc 1261 tagttaagac atgttccctg agcaacataa gctttttggt gtgatcatga aatctcggtt 1321 ctacctaaat ctgatctttt gtctgtacat aagtttctca gatttggttg aatgctacat 1381 ctttggaaaa caaatatctt tcagtttgtg tttttttaat tgtttttgag caaatctttt 1441 gccggattct gtaagtcgct tgtgtgtttt ttgttgtcaa ccaaagccac ttttgcaact 1501 tagtttgtta aattaatgcc ttaatggtaa aataacaaga ttggtggctg tagtacgaat 1561 tgt //