Dbfetch
LOCUS NM_001021892 2185 bp mRNA linear PLN 16-AUG-2024 DEFINITION Schizosaccharomyces pombe translocation subcomplex subunit Sec63 (sec63), mRNA. ACCESSION NM_001021892 VERSION NM_001021892.3 DBLINK BioProject: PRJNA127 BioSample: SAMEA3138176 KEYWORDS RefSeq. SOURCE Schizosaccharomyces pombe (fission yeast) ORGANISM Schizosaccharomyces pombe Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces. REFERENCE 1 (bases 1 to 2185) AUTHORS Schafer,B., Hansen,M. and Lang,B.F. TITLE Transcription and RNA-processing in fission yeast mitochondria JOURNAL RNA 11 (5), 785-795 (2005) PUBMED 15811919 REFERENCE 2 (bases 1 to 2185) AUTHORS Wood,V., Gwilliam,R., Rajandream,M.A., Lyne,M., Lyne,R., Stewart,A., Sgouros,J., Peat,N., Hayles,J., Baker,S., Basham,D., Bowman,S., Brooks,K., Brown,D., Brown,S., Chillingworth,T., Churcher,C., Collins,M., Connor,R., Cronin,A., Davis,P., Feltwell,T., Fraser,A., Gentles,S., Goble,A., Hamlin,N., Harris,D., Hidalgo,J., Hodgson,G., Holroyd,S., Hornsby,T., Howarth,S., Huckle,E.J., Hunt,S., Jagels,K., James,K., Jones,L., Jones,M., Leather,S., McDonald,S., McLean,J., Mooney,P., Moule,S., Mungall,K., Murphy,L., Niblett,D., Odell,C., Oliver,K., O'Neil,S., Pearson,D., Quail,M.A., Rabbinowitsch,E., Rutherford,K., Rutter,S., Saunders,D., Seeger,K., Sharp,S., Skelton,J., Simmonds,M., Squares,R., Squares,S., Stevens,K., Taylor,K., Taylor,R.G., Tivey,A., Walsh,S., Warren,T., Whitehead,S., Woodward,J., Volckaert,G., Aert,R., Robben,J., Grymonprez,B., Weltjens,I., Vanstreels,E., Rieger,M., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Dusterhoft,A., Fritzc,C., Holzer,E., Moestl,D., Hilbert,H., Borzym,K., Langer,I., Beck,A., Lehrach,H., Reinhardt,R., Pohl,T.M., Eger,P., Zimmermann,W., Wedler,H., Wambutt,R., Purnelle,B., Goffeau,A., Cadieu,E., Dreano,S., Gloux,S., Lelaure,V., Mottier,S., Galibert,F., Aves,S.J., Xiang,Z., Hunt,C., Moore,K., Hurst,S.M., Lucas,M., Rochet,M., Gaillardin,C., Tallada,V.A., Garzon,A., Thode,G., Daga,R.R., Cruzado,L., Jimenez,J., Sanchez,M., del Rey,F., Benito,J., Dominguez,A., Revuelta,J.L., Moreno,S., Armstrong,J., Forsburg,S.L., Cerutti,L., Lowe,T., McCombie,W.R., Paulsen,I., Potashkin,J., Shpakovski,G.V., Ussery,D., Barrell,B.G. and Nurse,P. TITLE The genome sequence of Schizosaccharomyces pombe JOURNAL Nature 415 (6874), 871-880 (2002) PUBMED 11859360 REMARK Erratum:[Nature 2003 Jan 2;421(6918):94. Cerrutti L [corrected to Cerutti L]] REFERENCE 3 AUTHORS Wood,V., Gwilliam,R., Rajandream,M.A., Lyne,M., Lyne,R., Stewart,A., Sgouros,J., Peat,N., Hayles,J., Baker,S., Basham,D., Bowman,S., Brooks,K., Brown,D., Brown,S., Chillingworth,T., Churcher,C., Collins,M., Connor,R., Cronin,A., Davis,P., Feltwell,T., Fraser,A., Gentles,S., Goble,A., Hamlin,N., Harris,D., Hidalgo,J., Hodgson,G., Holroyd,S., Hornsby,T., Howarth,S., Huckle,E.J., Hunt,S., Jagels,K., James,K., Jones,L., Jones,M., Leather,S., McDonald,S., McLean,J., Mooney,P., Moule,S., Mungall,K., Murphy,L., Niblett,D., Odell,C., Oliver,K., O'Neil,S., Pearson,D., Quail,M.A., Rabbinowitsch,E., Rutherford,K., Rutter,S., Saunders,D., Seeger,K., Sharp,S., Skelton,J., Simmonds,M., Squares,R., Squares,S., Stevens,K., Taylor,K., Taylor,R.G., Tivey,A., Walsh,S., Warren,T., Whitehead,S., Woodward,J., Volckaert,G., Aert,R., Robben,J., Grymonprez,B., Weltjens,I., Vanstreels,E., Rieger,M., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Dusterhoft,A., Fritzc,C., Holzer,E., Moestl,D., Hilbert,H., Borzym,K., Langer,I., Beck,A., Lehrach,H., Reinhardt,R., Pohl,T.M., Eger,P., Zimmermann,W., Wedler,H., Wambutt,R., Purnelle,B., Goffeau,A., Cadieu,E., Dreano,S., Gloux,S., Lelaure,V., Mottier,S., Galibert,F., Aves,S.J., Xiang,Z., Hunt,C., Moore,K., Hurst,S.M., Lucas,M., Rochet,M., Gaillardin,C., Tallada,V.A., Garzon,A., Thode,G., Daga,R.R., Cruzado,L., Jimenez,J., Sanchez,M., del Rey,F., Benito,J., Dominguez,A., Revuelta,J.L., Moreno,S., Armstrong,J., Forsburg,S.L., Cerutti,L., Lowe,T., McCombie,W.R., Paulsen,I., Potashkin,J., Shpakovski,G.V., Ussery,D., Barrell,B.G. and Nurse,P. TITLE The genome sequence of Schizosaccharomyces pombe JOURNAL Nature 415 (6874), 871-880 (2002) PUBMED 11859360 REMARK Erratum:[Nature 2003 Jan 2;421(6918):94. Cerrutti L [corrected to Cerutti L]] REFERENCE 4 (bases 1 to 2185) AUTHORS Trinkl,H., Lang,B.F. and Wolf,K. TITLE Nucleotide sequence of the gene encoding the small ribosomal RNA in the mitochondrial genome of the fission yeast Schizosaccharomyces pombe JOURNAL Nucleic Acids Res 17 (16), 6730 (1989) PUBMED 2780299 REFERENCE 5 (bases 1 to 2185) AUTHORS Lang,B.F., Cedergren,R. and Gray,M.W. TITLE The mitochondrial genome of the fission yeast, Schizosaccharomyces pombe. Sequence of the large-subunit ribosomal RNA gene, comparison of potential secondary structure in fungal mitochondrial large-subunit rRNAs and evolutionary considerations JOURNAL Eur J Biochem 169 (3), 527-537 (1987) PUBMED 2446871 REFERENCE 6 (bases 1 to 2185) AUTHORS Lang,B.F., Ahne,F. and Bonen,L. TITLE The mitochondrial genome of the fission yeast Schizosaccharomyces pombe. The cytochrome b gene has an intron closely related to the first two introns in the Saccharomyces cerevisiae cox1 gene JOURNAL J Mol Biol 184 (3), 353-366 (1985) PUBMED 4046021 REFERENCE 7 (bases 1 to 2185) AUTHORS Lang,B.F. TITLE The mitochondrial genome of the fission yeast Schizosaccharomyces pombe: highly homologous introns are inserted at the same position of the otherwise less conserved cox1 genes in Schizosaccharomyces pombe and Aspergillus nidulans JOURNAL EMBO J 3 (9), 2129-2136 (1984) PUBMED 6092057 REFERENCE 8 (bases 1 to 2185) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (16-AUG-2024) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 9 AUTHORS Wood,V. and Rutherford,K. CONSRTM PomBase TITLE Direct Submission JOURNAL Submitted (13-MAR-2024) University of Cambridge, PomBase, Hopkins building, Tennis Court Rd, Cambridge, United Kingdom REFERENCE 10 AUTHORS Wood,V. CONSRTM The Schizosaccharomyces pombe Genome Sequencing Consortium TITLE Direct Submission JOURNAL Submitted (29-JUN-2007) European Schizosaccharomyces genome sequencing project, Sanger Institute, The Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_003423). On Jun 21, 2024 this sequence version replaced NM_001021892.2. FEATURES Location/Qualifiers source 1..2185 /organism="Schizosaccharomyces pombe" /mol_type="mRNA" /strain="972h-" /db_xref="taxon:4896" /chromosome="II" gene 1..2185 /gene="sec63" /locus_tag="SPOM_SPBC36B7.03" /db_xref="GeneID:2540961" /db_xref="PomBase:SPBC36B7.03" CDS 22..1857 /gene="sec63" /locus_tag="SPOM_SPBC36B7.03" /codon_start=1 /product="translocation subcomplex subunit Sec63" /protein_id="NP_595985.1" /db_xref="GeneID:2540961" /db_xref="PomBase:SPBC36B7.03" /translation="MSSEYKYDEQGIFFPVFLLVGTSCCVLPLTYSTILGPSASKEKK NVRDPFQKYRPKDLKVQRKSIFRLRYIFLILGWLAIGFLSYKIANSRLKLNIWDPYEI LGIAKGTSVDDVRRHYKRLSIKFHPDKVRNMVNTTREEVEKHYIEITNAYRALTDDKT RENYALYGTPDVPQHISVGIALPKWISESENSIYILGFYGLVFGIVLPYAVGKWWYGS RTYTRDHVHVDTVDEWFPKMETSLTLDELLSLFASSKELTSLVPNEKNPKEYILKLLF DHLNRKKTNNFNTHQILSQSDVVLNALLSVATAFGFANPVDNVLKLWQHIVQAIPLDA PFPLLQLPHLLMEDVKNLSIRNISSIPQFLSLSEEQTKDYLPNYSKNQLKEMREIANG IPRISVVAAKVLVDDDEYITVGAIANLILDLKCSYGTEVVPEVSTDGTETATKKDEED AEKYHQSKDVVLGDVETLPYAWAPYFTQHHKTAWWIYVVDPRQNRVIVPPFSITDIPK TLRTFRIPFQVPPVAGTFSFQLHIMSNSYVGEDVISNLTMIVKDTSVLQEQLQEEAVS DLEDNSDIDESANAGKDFSDDENIGSDEEDESEYDPMDTDTSDGE" ORIGIN 1 gcctttacca aacaacttgc aatgtcgtct gagtacaagt acgacgagca gggtattttt 61 ttccctgtct ttttgctggt ggggacttcc tgctgtgtcc ttcctttgac ctattctacc 121 attcttggtc caagtgcgtc aaaagaaaaa aagaatgtaa gagatccgtt ccaaaagtat 181 cgtcctaagg atttaaaagt acaaaggaaa tcaatatttc gacttcgata tattttcctc 241 attctaggtt ggttggcaat tggtttcctc tcttacaaga tagcgaactc aagattaaaa 301 ctgaacattt gggatccgta tgaaattctg ggcattgcta aaggcacttc agtggatgat 361 gttcgtcgtc attataaaag actctcaatt aaatttcacc ctgacaaggt caggaatatg 421 gtaaatacta ctagagaaga ggttgagaag cattatattg aaatcaccaa tgcctacaga 481 gctttaactg atgataaaac tcgcgaaaat tatgctttat acggtactcc tgatgttcct 541 caacacattt cagttggtat agcccttcca aagtggattt ccgagtcaga aaacagcata 601 tatatccttg gtttttatgg acttgttttt ggtatcgttt taccgtatgc agtaggcaaa 661 tggtggtatg gtagtcgtac atataccaga gaccatgtcc acgtcgatac agtggatgag 721 tggtttccaa aaatggaaac tagcctaaca cttgatgaac ttttgtctct ctttgcttcc 781 agcaaggaat taacttcgtt ggtgccaaat gaaaagaatc ccaaggaata cattctaaag 841 ttattgtttg accatttgaa tcgaaaaaag acaaacaatt tcaatacaca tcaaatactt 901 tcacaatctg atgtcgtact taatgccttg ctctctgttg ctaccgcctt tggttttgca 961 aatcctgttg ataacgtgtt gaaactatgg caacatattg tgcaagcaat tcctttagat 1021 gcaccatttc ctttgttgca acttcctcat cttttaatgg aagacgtcaa gaatttatca 1081 attagaaaca tttcttcgat tcctcagttt ctttctttaa gtgaggaaca gacgaaggat 1141 tatcttccca attattccaa aaaccagctt aaagaaatgc gcgagatagc aaatggcatt 1201 cctcgaattt ccgtggtcgc agcaaaggtt ttggttgacg atgatgagta tatcactgtg 1261 ggagcaattg caaatttgat tttggatttg aaatgctctt atggaaccga agttgtccca 1321 gaagtcagca cggacggaac agagacggcc acaaaaaagg atgaggaaga tgccgaaaaa 1381 tatcaccaat cgaaagatgt ggttttggga gatgttgaaa ctcttccata cgcctgggct 1441 ccttacttta cccagcatca taaaactgca tggtggatct atgtagtgga tcctcgccaa 1501 aatagggtta ttgtaccgcc ctttagtatc acagatattc caaaaacttt gcgtacattt 1561 agaatacctt tccaggttcc tccagtcgca ggcacattca gttttcaact tcatatcatg 1621 tccaattcct atgttggtga agatgttatt agtaatctaa ctatgattgt taaagatact 1681 tccgtattgc aagagcaatt gcaagaagaa gctgtttcgg atttagaaga caatagtgat 1741 atcgatgaat cagcaaacgc gggtaaggat ttcagcgatg atgagaatat tggttctgat 1801 gaagaagacg aatcggaata tgaccctatg gatactgaca cttctgatgg agaataatac 1861 catgcgtcat gactaatcca tttttttctg aatgtgtcat aaaatttaaa atacgtattt 1921 cttccattgt ttcatttctt gttagatgta acagacaata aaccttcatc gttcaaattc 1981 aattctgcta aggttttttg gtctttgtaa tgtggacgat gtctgagtgt taaataactt 2041 ttacaaatta atttcttagc ataaagggac cttttagacg ccggacgcat tgctttgaca 2101 ttagctgaat aacagttgaa ataatataat ttgcattttt tattcgttct tatgaacctg 2161 tttagtaata atccttgcat tccaa //