Dbfetch
LOCUS NM_001021724 2007 bp mRNA linear PLN 16-AUG-2024 DEFINITION Schizosaccharomyces pombe Ino80, NuA4 and Swr1 complex actin-like protein Arp4 (alp5), mRNA. ACCESSION NM_001021724 VERSION NM_001021724.3 DBLINK BioProject: PRJNA127 BioSample: SAMEA3138176 KEYWORDS RefSeq. SOURCE Schizosaccharomyces pombe (fission yeast) ORGANISM Schizosaccharomyces pombe Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces. REFERENCE 1 (bases 1 to 2007) AUTHORS Schafer,B., Hansen,M. and Lang,B.F. TITLE Transcription and RNA-processing in fission yeast mitochondria JOURNAL RNA 11 (5), 785-795 (2005) PUBMED 15811919 REFERENCE 2 (bases 1 to 2007) AUTHORS Wood,V., Gwilliam,R., Rajandream,M.A., Lyne,M., Lyne,R., Stewart,A., Sgouros,J., Peat,N., Hayles,J., Baker,S., Basham,D., Bowman,S., Brooks,K., Brown,D., Brown,S., Chillingworth,T., Churcher,C., Collins,M., Connor,R., Cronin,A., Davis,P., Feltwell,T., Fraser,A., Gentles,S., Goble,A., Hamlin,N., Harris,D., Hidalgo,J., Hodgson,G., Holroyd,S., Hornsby,T., Howarth,S., Huckle,E.J., Hunt,S., Jagels,K., James,K., Jones,L., Jones,M., Leather,S., McDonald,S., McLean,J., Mooney,P., Moule,S., Mungall,K., Murphy,L., Niblett,D., Odell,C., Oliver,K., O'Neil,S., Pearson,D., Quail,M.A., Rabbinowitsch,E., Rutherford,K., Rutter,S., Saunders,D., Seeger,K., Sharp,S., Skelton,J., Simmonds,M., Squares,R., Squares,S., Stevens,K., Taylor,K., Taylor,R.G., Tivey,A., Walsh,S., Warren,T., Whitehead,S., Woodward,J., Volckaert,G., Aert,R., Robben,J., Grymonprez,B., Weltjens,I., Vanstreels,E., Rieger,M., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Dusterhoft,A., Fritzc,C., Holzer,E., Moestl,D., Hilbert,H., Borzym,K., Langer,I., Beck,A., Lehrach,H., Reinhardt,R., Pohl,T.M., Eger,P., Zimmermann,W., Wedler,H., Wambutt,R., Purnelle,B., Goffeau,A., Cadieu,E., Dreano,S., Gloux,S., Lelaure,V., Mottier,S., Galibert,F., Aves,S.J., Xiang,Z., Hunt,C., Moore,K., Hurst,S.M., Lucas,M., Rochet,M., Gaillardin,C., Tallada,V.A., Garzon,A., Thode,G., Daga,R.R., Cruzado,L., Jimenez,J., Sanchez,M., del Rey,F., Benito,J., Dominguez,A., Revuelta,J.L., Moreno,S., Armstrong,J., Forsburg,S.L., Cerutti,L., Lowe,T., McCombie,W.R., Paulsen,I., Potashkin,J., Shpakovski,G.V., Ussery,D., Barrell,B.G. and Nurse,P. TITLE The genome sequence of Schizosaccharomyces pombe JOURNAL Nature 415 (6874), 871-880 (2002) PUBMED 11859360 REMARK Erratum:[Nature 2003 Jan 2;421(6918):94. Cerrutti L [corrected to Cerutti L]] REFERENCE 3 AUTHORS Wood,V., Gwilliam,R., Rajandream,M.A., Lyne,M., Lyne,R., Stewart,A., Sgouros,J., Peat,N., Hayles,J., Baker,S., Basham,D., Bowman,S., Brooks,K., Brown,D., Brown,S., Chillingworth,T., Churcher,C., Collins,M., Connor,R., Cronin,A., Davis,P., Feltwell,T., Fraser,A., Gentles,S., Goble,A., Hamlin,N., Harris,D., Hidalgo,J., Hodgson,G., Holroyd,S., Hornsby,T., Howarth,S., Huckle,E.J., Hunt,S., Jagels,K., James,K., Jones,L., Jones,M., Leather,S., McDonald,S., McLean,J., Mooney,P., Moule,S., Mungall,K., Murphy,L., Niblett,D., Odell,C., Oliver,K., O'Neil,S., Pearson,D., Quail,M.A., Rabbinowitsch,E., Rutherford,K., Rutter,S., Saunders,D., Seeger,K., Sharp,S., Skelton,J., Simmonds,M., Squares,R., Squares,S., Stevens,K., Taylor,K., Taylor,R.G., Tivey,A., Walsh,S., Warren,T., Whitehead,S., Woodward,J., Volckaert,G., Aert,R., Robben,J., Grymonprez,B., Weltjens,I., Vanstreels,E., Rieger,M., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Dusterhoft,A., Fritzc,C., Holzer,E., Moestl,D., Hilbert,H., Borzym,K., Langer,I., Beck,A., Lehrach,H., Reinhardt,R., Pohl,T.M., Eger,P., Zimmermann,W., Wedler,H., Wambutt,R., Purnelle,B., Goffeau,A., Cadieu,E., Dreano,S., Gloux,S., Lelaure,V., Mottier,S., Galibert,F., Aves,S.J., Xiang,Z., Hunt,C., Moore,K., Hurst,S.M., Lucas,M., Rochet,M., Gaillardin,C., Tallada,V.A., Garzon,A., Thode,G., Daga,R.R., Cruzado,L., Jimenez,J., Sanchez,M., del Rey,F., Benito,J., Dominguez,A., Revuelta,J.L., Moreno,S., Armstrong,J., Forsburg,S.L., Cerutti,L., Lowe,T., McCombie,W.R., Paulsen,I., Potashkin,J., Shpakovski,G.V., Ussery,D., Barrell,B.G. and Nurse,P. TITLE The genome sequence of Schizosaccharomyces pombe JOURNAL Nature 415 (6874), 871-880 (2002) PUBMED 11859360 REMARK Erratum:[Nature 2003 Jan 2;421(6918):94. Cerrutti L [corrected to Cerutti L]] REFERENCE 4 (bases 1 to 2007) AUTHORS Trinkl,H., Lang,B.F. and Wolf,K. TITLE Nucleotide sequence of the gene encoding the small ribosomal RNA in the mitochondrial genome of the fission yeast Schizosaccharomyces pombe JOURNAL Nucleic Acids Res 17 (16), 6730 (1989) PUBMED 2780299 REFERENCE 5 (bases 1 to 2007) AUTHORS Lang,B.F., Cedergren,R. and Gray,M.W. TITLE The mitochondrial genome of the fission yeast, Schizosaccharomyces pombe. Sequence of the large-subunit ribosomal RNA gene, comparison of potential secondary structure in fungal mitochondrial large-subunit rRNAs and evolutionary considerations JOURNAL Eur J Biochem 169 (3), 527-537 (1987) PUBMED 2446871 REFERENCE 6 (bases 1 to 2007) AUTHORS Lang,B.F., Ahne,F. and Bonen,L. TITLE The mitochondrial genome of the fission yeast Schizosaccharomyces pombe. The cytochrome b gene has an intron closely related to the first two introns in the Saccharomyces cerevisiae cox1 gene JOURNAL J Mol Biol 184 (3), 353-366 (1985) PUBMED 4046021 REFERENCE 7 (bases 1 to 2007) AUTHORS Lang,B.F. TITLE The mitochondrial genome of the fission yeast Schizosaccharomyces pombe: highly homologous introns are inserted at the same position of the otherwise less conserved cox1 genes in Schizosaccharomyces pombe and Aspergillus nidulans JOURNAL EMBO J 3 (9), 2129-2136 (1984) PUBMED 6092057 REFERENCE 8 (bases 1 to 2007) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (16-AUG-2024) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 9 AUTHORS Wood,V. and Rutherford,K. CONSRTM PomBase TITLE Direct Submission JOURNAL Submitted (13-MAR-2024) University of Cambridge, PomBase, Hopkins building, Tennis Court Rd, Cambridge, United Kingdom REFERENCE 10 AUTHORS Wood,V. CONSRTM The Schizosaccharomyces pombe Genome Sequencing Consortium TITLE Direct Submission JOURNAL Submitted (29-JUN-2007) European Schizosaccharomyces genome sequencing project, Sanger Institute, The Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_003423). On Jun 21, 2024 this sequence version replaced NM_001021724.2. FEATURES Location/Qualifiers source 1..2007 /organism="Schizosaccharomyces pombe" /mol_type="mRNA" /strain="972h-" /db_xref="taxon:4896" /chromosome="II" gene 1..2007 /gene="alp5" /locus_tag="SPOM_SPBP23A10.08" /gene_synonym="arp4" /db_xref="GeneID:2541318" /db_xref="PomBase:SPBP23A10.08" CDS 64..1365 /gene="alp5" /locus_tag="SPOM_SPBP23A10.08" /gene_synonym="arp4" /codon_start=1 /product="Ino80, NuA4 and Swr1 complex actin-like protein Arp4" /protein_id="NP_595820.1" /db_xref="GeneID:2541318" /db_xref="PomBase:SPBP23A10.08" /translation="MTSAFYGGDEVSAIVIDPGSKWTRIGFSGEDIPKCVLPSYCGEF SDGRRLFGEEYIYKSNPGMEIKNAIRNGWVENWDVTVDLWRYGLEQQLKTNPLEHPIL ITEPFDNPPENRVKTLETMFESLRCPATYLAKQETCAAFASGKGTACLVDIGAERSSV SAIYDGFVLQKGYQVQHFSGNAINDILAQTLRDKNFEVMPKYLVKSKNPVEIGQPANC ELRPRDTTDSYHQFQVQRVYDEWKEECALISDVPFSSETTIAESEFEFPDGSRMMFGA ERYQIPEHLFVPGSDEEMNEEPSKPIEQTENNEVSQQDSSVTNTSSRILGIPQLFQNC ISECDVDIRASLLNNVIVCGGTSLMQGFSLRLQNELSKLYPGSRLKIHASGHVVERSY ASWLGGSILSSLGTFHQLWISRQEYEEHGSDRLALIEKRCK" ORIGIN 1 aagtgccaac gacaactttt gcctgagaat cttatcacgt agacaaactg tactgctggt 61 aagatgacta gcgcatttta tggcggagat gaagtttcag ctattgtaat tgatcctgga 121 agcaaatgga ctcgaatagg tttttctgga gaagatattc ccaaatgcgt actccctagc 181 tactgtggag agttcagtga tggcagacgg ttgttcggtg aggaatacat atataaatca 241 aaccctggaa tggaaataaa aaatgcaatt cgtaatggtt gggttgaaaa ttgggatgtt 301 actgtagatc tctggcgtta tggattagag cagcagttga agactaatcc tttagagcat 361 ccaatcttga ttacggaacc atttgataat cccccagaaa atcgagtgaa aacactagaa 421 acgatgtttg aatctttgcg ttgtcctgca acatacctcg ccaagcagga gacgtgtgcg 481 gcgtttgcaa gcgggaaagg tactgcttgt ttagtagaca ttggtgcgga gcgtagctcg 541 gtgtctgcta tatatgatgg ttttgtgctt caaaaaggct atcaggttca acatttttct 601 gggaatgcaa ttaacgatat tttggcgcaa actctcaggg ataagaattt cgaagtgatg 661 cctaagtact tagtgaaaag caaaaatcca gtggagatag ggcagccagc taattgtgag 721 ttacgtcctc gtgatactac agattcttat catcaatttc aggtccagcg agtctacgat 781 gaatggaaag aagaatgtgc tctcatttcc gatgttccat tttcatctga aaccacgatt 841 gctgaatcag agttcgaatt tccagacggt tcccgtatga tgtttggcgc ggaacgctat 901 caaattcctg aacatttgtt tgtgccagga agtgatgaag aaatgaacga ggaaccttcg 961 aagccaatag aacaaaccga aaataatgag gtatcacaac aagattcttc ggttaccaac 1021 acttcttctc gcattttggg gatacctcag ttgttccaga actgtatttc ggaatgcgat 1081 gttgatatcc gtgcttcttt gctcaacaat gttattgttt gtggaggcac tagtttgatg 1141 caaggattct ctcttcgtct gcaaaatgaa ctttcaaaat tatatcctgg cagccgtctt 1201 aaaatccatg cttccggtca tgttgttgaa cgcagttatg cttcatggtt aggtggatct 1261 attttaagta gtcttggaac gtttcatcaa ttatggatat cacgtcaaga atatgaagaa 1321 catggttctg atcgtttggc tttaatcgaa aaacgatgta aataatacgt gtaatgataa 1381 ttactaatct ctaatgaacc tttaattaaa agtcgttgga ttttagggaa ttttccttaa 1441 gtggaaaaaa aggggaaact ttcgtttgaa ataaaaaata attgagatat tattacttta 1501 cgtatgagac tctttccctg tccttatacc tatcatttga agagaaaata ttggatcatg 1561 tattttgcta tcatcaataa gcatcaaaag ttttgttttt gtaacagatt gttactctgg 1621 actggttcgt tggctctttg tgatattcat gctattgaat ttgtgtaatc ttccgcagat 1681 tatacataaa gcggattttt ttgagtacgg ccaatacatc gattggattt tatgttgtaa 1741 gcagaaaaga aagtcttact gacaaaatca ttttaagcta cattaaagct caattatttg 1801 aagctaaata tgccttgcca ttttttggat atgagtgata ggttttaaat tgtacccctt 1861 tagattctaa tttctcatca atgtgattgt tttattccct taaagccctg tccgatgaag 1921 caagcacatc gtactgtgtt ctgaatatta cgtgagaatt gtaatcattg aatgatatcc 1981 tttcttttat tttgaaatga aacttta //