Dbfetch
LOCUS NM_001021531 2575 bp mRNA linear PLN 16-AUG-2024 DEFINITION Schizosaccharomyces pombe RNA-binding protein Yme2 (yme2), mRNA. ACCESSION NM_001021531 VERSION NM_001021531.3 DBLINK BioProject: PRJNA127 BioSample: SAMEA3138176 KEYWORDS RefSeq. SOURCE Schizosaccharomyces pombe (fission yeast) ORGANISM Schizosaccharomyces pombe Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces. REFERENCE 1 (bases 1 to 2575) AUTHORS Schafer,B., Hansen,M. and Lang,B.F. TITLE Transcription and RNA-processing in fission yeast mitochondria JOURNAL RNA 11 (5), 785-795 (2005) PUBMED 15811919 REFERENCE 2 (bases 1 to 2575) AUTHORS Wood,V., Gwilliam,R., Rajandream,M.A., Lyne,M., Lyne,R., Stewart,A., Sgouros,J., Peat,N., Hayles,J., Baker,S., Basham,D., Bowman,S., Brooks,K., Brown,D., Brown,S., Chillingworth,T., Churcher,C., Collins,M., Connor,R., Cronin,A., Davis,P., Feltwell,T., Fraser,A., Gentles,S., Goble,A., Hamlin,N., Harris,D., Hidalgo,J., Hodgson,G., Holroyd,S., Hornsby,T., Howarth,S., Huckle,E.J., Hunt,S., Jagels,K., James,K., Jones,L., Jones,M., Leather,S., McDonald,S., McLean,J., Mooney,P., Moule,S., Mungall,K., Murphy,L., Niblett,D., Odell,C., Oliver,K., O'Neil,S., Pearson,D., Quail,M.A., Rabbinowitsch,E., Rutherford,K., Rutter,S., Saunders,D., Seeger,K., Sharp,S., Skelton,J., Simmonds,M., Squares,R., Squares,S., Stevens,K., Taylor,K., Taylor,R.G., Tivey,A., Walsh,S., Warren,T., Whitehead,S., Woodward,J., Volckaert,G., Aert,R., Robben,J., Grymonprez,B., Weltjens,I., Vanstreels,E., Rieger,M., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Dusterhoft,A., Fritzc,C., Holzer,E., Moestl,D., Hilbert,H., Borzym,K., Langer,I., Beck,A., Lehrach,H., Reinhardt,R., Pohl,T.M., Eger,P., Zimmermann,W., Wedler,H., Wambutt,R., Purnelle,B., Goffeau,A., Cadieu,E., Dreano,S., Gloux,S., Lelaure,V., Mottier,S., Galibert,F., Aves,S.J., Xiang,Z., Hunt,C., Moore,K., Hurst,S.M., Lucas,M., Rochet,M., Gaillardin,C., Tallada,V.A., Garzon,A., Thode,G., Daga,R.R., Cruzado,L., Jimenez,J., Sanchez,M., del Rey,F., Benito,J., Dominguez,A., Revuelta,J.L., Moreno,S., Armstrong,J., Forsburg,S.L., Cerutti,L., Lowe,T., McCombie,W.R., Paulsen,I., Potashkin,J., Shpakovski,G.V., Ussery,D., Barrell,B.G. and Nurse,P. TITLE The genome sequence of Schizosaccharomyces pombe JOURNAL Nature 415 (6874), 871-880 (2002) PUBMED 11859360 REMARK Erratum:[Nature 2003 Jan 2;421(6918):94. Cerrutti L [corrected to Cerutti L]] REFERENCE 3 AUTHORS Wood,V., Gwilliam,R., Rajandream,M.A., Lyne,M., Lyne,R., Stewart,A., Sgouros,J., Peat,N., Hayles,J., Baker,S., Basham,D., Bowman,S., Brooks,K., Brown,D., Brown,S., Chillingworth,T., Churcher,C., Collins,M., Connor,R., Cronin,A., Davis,P., Feltwell,T., Fraser,A., Gentles,S., Goble,A., Hamlin,N., Harris,D., Hidalgo,J., Hodgson,G., Holroyd,S., Hornsby,T., Howarth,S., Huckle,E.J., Hunt,S., Jagels,K., James,K., Jones,L., Jones,M., Leather,S., McDonald,S., McLean,J., Mooney,P., Moule,S., Mungall,K., Murphy,L., Niblett,D., Odell,C., Oliver,K., O'Neil,S., Pearson,D., Quail,M.A., Rabbinowitsch,E., Rutherford,K., Rutter,S., Saunders,D., Seeger,K., Sharp,S., Skelton,J., Simmonds,M., Squares,R., Squares,S., Stevens,K., Taylor,K., Taylor,R.G., Tivey,A., Walsh,S., Warren,T., Whitehead,S., Woodward,J., Volckaert,G., Aert,R., Robben,J., Grymonprez,B., Weltjens,I., Vanstreels,E., Rieger,M., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Dusterhoft,A., Fritzc,C., Holzer,E., Moestl,D., Hilbert,H., Borzym,K., Langer,I., Beck,A., Lehrach,H., Reinhardt,R., Pohl,T.M., Eger,P., Zimmermann,W., Wedler,H., Wambutt,R., Purnelle,B., Goffeau,A., Cadieu,E., Dreano,S., Gloux,S., Lelaure,V., Mottier,S., Galibert,F., Aves,S.J., Xiang,Z., Hunt,C., Moore,K., Hurst,S.M., Lucas,M., Rochet,M., Gaillardin,C., Tallada,V.A., Garzon,A., Thode,G., Daga,R.R., Cruzado,L., Jimenez,J., Sanchez,M., del Rey,F., Benito,J., Dominguez,A., Revuelta,J.L., Moreno,S., Armstrong,J., Forsburg,S.L., Cerutti,L., Lowe,T., McCombie,W.R., Paulsen,I., Potashkin,J., Shpakovski,G.V., Ussery,D., Barrell,B.G. and Nurse,P. TITLE The genome sequence of Schizosaccharomyces pombe JOURNAL Nature 415 (6874), 871-880 (2002) PUBMED 11859360 REMARK Erratum:[Nature 2003 Jan 2;421(6918):94. Cerrutti L [corrected to Cerutti L]] REFERENCE 4 (bases 1 to 2575) AUTHORS Trinkl,H., Lang,B.F. and Wolf,K. TITLE Nucleotide sequence of the gene encoding the small ribosomal RNA in the mitochondrial genome of the fission yeast Schizosaccharomyces pombe JOURNAL Nucleic Acids Res 17 (16), 6730 (1989) PUBMED 2780299 REFERENCE 5 (bases 1 to 2575) AUTHORS Lang,B.F., Cedergren,R. and Gray,M.W. TITLE The mitochondrial genome of the fission yeast, Schizosaccharomyces pombe. Sequence of the large-subunit ribosomal RNA gene, comparison of potential secondary structure in fungal mitochondrial large-subunit rRNAs and evolutionary considerations JOURNAL Eur J Biochem 169 (3), 527-537 (1987) PUBMED 2446871 REFERENCE 6 (bases 1 to 2575) AUTHORS Lang,B.F., Ahne,F. and Bonen,L. TITLE The mitochondrial genome of the fission yeast Schizosaccharomyces pombe. The cytochrome b gene has an intron closely related to the first two introns in the Saccharomyces cerevisiae cox1 gene JOURNAL J Mol Biol 184 (3), 353-366 (1985) PUBMED 4046021 REFERENCE 7 (bases 1 to 2575) AUTHORS Lang,B.F. TITLE The mitochondrial genome of the fission yeast Schizosaccharomyces pombe: highly homologous introns are inserted at the same position of the otherwise less conserved cox1 genes in Schizosaccharomyces pombe and Aspergillus nidulans JOURNAL EMBO J 3 (9), 2129-2136 (1984) PUBMED 6092057 REFERENCE 8 (bases 1 to 2575) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (16-AUG-2024) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 9 AUTHORS Wood,V. and Rutherford,K. CONSRTM PomBase TITLE Direct Submission JOURNAL Submitted (13-MAR-2024) University of Cambridge, PomBase, Hopkins building, Tennis Court Rd, Cambridge, United Kingdom REFERENCE 10 AUTHORS Wood,V. CONSRTM The Schizosaccharomyces pombe Genome Sequencing Consortium TITLE Direct Submission JOURNAL Submitted (29-JUN-2007) European Schizosaccharomyces genome sequencing project, Sanger Institute, The Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_003423). On Jun 21, 2024 this sequence version replaced NM_001021531.2. FEATURES Location/Qualifiers source 1..2575 /organism="Schizosaccharomyces pombe" /mol_type="mRNA" /strain="972h-" /db_xref="taxon:4896" /chromosome="II" gene 1..2575 /gene="yme2" /locus_tag="SPOM_SPBC83.05" /db_xref="GeneID:2540741" /db_xref="PomBase:SPBC83.05" CDS 142..2463 /gene="yme2" /locus_tag="SPOM_SPBC83.05" /codon_start=1 /product="RNA-binding protein Yme2" /protein_id="NP_595637.1" /db_xref="GeneID:2540741" /db_xref="PomBase:SPBC83.05" /translation="MNLFLSRFTGLRNTSFLGHARPFMFPRRYAHSLVAHNIGHIKLD PNEGLFFVDNLVNTPTYFYIQRYTALLFQNNLKKQLSAAFPSSDTMQLEDIIFRWQDG GAFLKVRYKEFPQDTEAVSEHVRESFRKRPVRTILHPFSTPIPHMVHGIPWLQDLYIF PSRTVDVNFEGPPLSQERLYSIFRTYGKLRSVTINSPTSATLSFSSLRSATSALNCMH GFVYGKTEFHMRYRHMNRFVAFKDWLFSHPRFTIPLVAAAITVLTASLFDPIRKFFVE TNIVHGQKLRNINVVGWVKKKTRDIVLSPFHENGTNIKAPIWTTREKDCEQLKEWLDE ALHSFIVVQGPRGSGKRDLVDRVVKERKNVLFFDCDRLFSTTNTEMFVSTLASQTGYF PLFSFLNNISSLIDMAAQGLIGQKTGIVSSSEGQVRQILNTTQTVLRSLALREHKEAD TSVLDESEFLEVHADRLPVVILDNFQLRKLSNPMQRVVAEWAGNLVKEGIAHVLMLTP DVGGTKSLEQYVNGWENRTLLLGDADPVLAQRYVIESLPEEMQTEELRKELRVQLPKI GGRLRDLDYVARRLRVNSSSVSEAIGGIVSQNASDILQTFLRPASLTSEEKPTFTPEE SWTLITYLSQHEYIPYHMLMLDPLFKGHDDAVRALEESELITITTVNARPDKVYAGKP VYVTAFRQLVNDPVLSANMQLVRCNALIGMANNAIKNDEQELQMLKDLGNLESGVKDR AHYLTTRIQKNQGVITDNEKSIERLTEALKKID" ORIGIN 1 gacttactgt taaccgtata acttaaataa tcattttctt ggctgttcgt ttttggtgtt 61 tgaatattca tattggagtg caacaaaccg ttgtgtattt cttagacatc gttgaaacta 121 atttaaagcc tacccgaaac tatgaatttg tttctatctc ggttcacggg gttacgaaat 181 acttcatttt tgggtcatgc acgaccgttt atgtttccac gtcgctatgc tcattcttta 241 gtggcacata atattggtca tatcaagcta gatccaaatg aaggtctttt cttcgtggat 301 aatctcgtca atactccaac ctatttctac attcagcgat acactgcgtt gctctttcag 361 aacaacttga aaaagcagct aagtgctgct tttccaagct ctgatacaat gcagttggaa 421 gatatcatat tcagatggca agatggagga gcatttttaa aagtacgtta caaggaattc 481 ccacaagata cagaagcggt ttcagaacac gtccgtgaat catttcgaaa gcgtccagtt 541 cgaacaattt tacacccttt ctctaccccg attccacaca tggtacatgg tattccttgg 601 cttcaagatt tatatatatt tccatctcgt acagtagatg tgaatttcga aggtccgccc 661 ctttcccagg aaagattgta tagtattttt aggacatatg gaaaactaag atccgtgacc 721 attaattcac ctacttctgc tactttgagt ttttcatcgc taaggtccgc tacgtcagct 781 ttaaactgta tgcatggttt tgtttatggg aaaacagaat tccacatgcg atacagacat 841 atgaaccgct ttgtcgcctt caaagactgg ttattctctc atcctcgttt tactattcct 901 ttggttgcgg cggctattac agttttaacg gcttctttat tcgatccgat aagaaagttc 961 tttgtcgaga caaacattgt acatggtcag aagttgagaa atatcaatgt tgttgggtgg 1021 gtcaaaaaga aaactcgcga tatagttttg agtccctttc acgaaaatgg tacaaatata 1081 aaggcaccga tttggacaac acgtgaaaag gattgtgaac agttgaaaga atggttggat 1141 gaagcattac attcttttat tgttgttcaa ggtcctcgtg gtagtggtaa gcgtgatctg 1201 gtagatcgag ttgttaaaga acgaaaaaat gttttgtttt tcgactgtga tcgcttattc 1261 tccactacta atacggaaat gttcgtaagt actcttgcta gccaaacggg gtatttcccc 1321 ctctttagct tcctaaacaa catatcgtca cttatcgata tggctgcaca aggtctcata 1381 ggacaaaaaa cgggaattgt ttcttctagt gaaggacaag tgcggcaaat tcttaacaca 1441 acacaaacgg tattgcgttc tctagcatta cgagagcata aagaagccga tactagtgtg 1501 ttggatgaat ctgagttttt agaagttcat gcagatcgct tacctgttgt tattctcgac 1561 aatttccagc ttcgtaaatt atcaaacccg atgcagagag tggttgctga atgggctggt 1621 aatttggtaa aggaaggaat tgctcatgta ctaatgctaa cacccgatgt tggaggcacc 1681 aagtcattag agcaatatgt caacggttgg gaaaatagaa cattgttatt aggagatgct 1741 gaccctgtac ttgctcagcg atatgtcata gagtctttac ccgaagagat gcaaacagaa 1801 gaattgagga aagaattgcg ggtccaatta ccgaagattg gtggccgact tcgtgatctt 1861 gattatgtag ctcgtaggtt gcgggttaat tcttccagtg tttctgaagc aattggcggt 1921 attgtaagtc aaaatgcctc tgatattttg caaacatttt tacggcctgc ttctttaacc 1981 agtgaggaga agccaacgtt cactccagaa gagtcatgga ccttaattac ttatttatct 2041 caacatgaat atatacccta tcatatgttg atgcttgacc cactgttcaa aggacacgac 2101 gatgccgttc gtgccttgga agaatcagaa ttgattacta ttaccacagt gaatgcaaga 2161 ccggataaag tctacgctgg aaaacctgta tatgttacgg ctttccggca acttgtaaat 2221 gatccagtat taagtgctaa tatgcagttg gtgagatgta acgcgttaat tggcatggct 2281 aacaatgcta tcaagaatga tgaacaggag ctacaaatgc taaaggacct tgggaacctt 2341 gaatcaggtg tgaaggatcg tgctcattac ttaacgacgc gtatccagaa aaatcaaggt 2401 gttattactg ataatgagaa aagtatagaa aggcttactg aggctttgaa aaaaatcgac 2461 taagatgcga aagcatatca tttaagatta cgtatgtttt tatgaattct ttagcatgaa 2521 gctataatgt caacaataat atcacattta atgactacgc attaacgaga gagaa //