Dbfetch
LOCUS NM_001021402 2080 bp mRNA linear PLN 16-AUG-2024 DEFINITION Schizosaccharomyces pombe CCAAT-binding factor complex subunit Php2 (php2), mRNA. ACCESSION NM_001021402 VERSION NM_001021402.3 DBLINK BioProject: PRJNA127 BioSample: SAMEA3138176 KEYWORDS RefSeq. SOURCE Schizosaccharomyces pombe (fission yeast) ORGANISM Schizosaccharomyces pombe Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces. REFERENCE 1 (bases 1 to 2080) AUTHORS Schafer,B., Hansen,M. and Lang,B.F. TITLE Transcription and RNA-processing in fission yeast mitochondria JOURNAL RNA 11 (5), 785-795 (2005) PUBMED 15811919 REFERENCE 2 (bases 1 to 2080) AUTHORS Wood,V., Gwilliam,R., Rajandream,M.A., Lyne,M., Lyne,R., Stewart,A., Sgouros,J., Peat,N., Hayles,J., Baker,S., Basham,D., Bowman,S., Brooks,K., Brown,D., Brown,S., Chillingworth,T., Churcher,C., Collins,M., Connor,R., Cronin,A., Davis,P., Feltwell,T., Fraser,A., Gentles,S., Goble,A., Hamlin,N., Harris,D., Hidalgo,J., Hodgson,G., Holroyd,S., Hornsby,T., Howarth,S., Huckle,E.J., Hunt,S., Jagels,K., James,K., Jones,L., Jones,M., Leather,S., McDonald,S., McLean,J., Mooney,P., Moule,S., Mungall,K., Murphy,L., Niblett,D., Odell,C., Oliver,K., O'Neil,S., Pearson,D., Quail,M.A., Rabbinowitsch,E., Rutherford,K., Rutter,S., Saunders,D., Seeger,K., Sharp,S., Skelton,J., Simmonds,M., Squares,R., Squares,S., Stevens,K., Taylor,K., Taylor,R.G., Tivey,A., Walsh,S., Warren,T., Whitehead,S., Woodward,J., Volckaert,G., Aert,R., Robben,J., Grymonprez,B., Weltjens,I., Vanstreels,E., Rieger,M., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Dusterhoft,A., Fritzc,C., Holzer,E., Moestl,D., Hilbert,H., Borzym,K., Langer,I., Beck,A., Lehrach,H., Reinhardt,R., Pohl,T.M., Eger,P., Zimmermann,W., Wedler,H., Wambutt,R., Purnelle,B., Goffeau,A., Cadieu,E., Dreano,S., Gloux,S., Lelaure,V., Mottier,S., Galibert,F., Aves,S.J., Xiang,Z., Hunt,C., Moore,K., Hurst,S.M., Lucas,M., Rochet,M., Gaillardin,C., Tallada,V.A., Garzon,A., Thode,G., Daga,R.R., Cruzado,L., Jimenez,J., Sanchez,M., del Rey,F., Benito,J., Dominguez,A., Revuelta,J.L., Moreno,S., Armstrong,J., Forsburg,S.L., Cerutti,L., Lowe,T., McCombie,W.R., Paulsen,I., Potashkin,J., Shpakovski,G.V., Ussery,D., Barrell,B.G. and Nurse,P. TITLE The genome sequence of Schizosaccharomyces pombe JOURNAL Nature 415 (6874), 871-880 (2002) PUBMED 11859360 REMARK Erratum:[Nature 2003 Jan 2;421(6918):94. Cerrutti L [corrected to Cerutti L]] REFERENCE 3 AUTHORS Wood,V., Gwilliam,R., Rajandream,M.A., Lyne,M., Lyne,R., Stewart,A., Sgouros,J., Peat,N., Hayles,J., Baker,S., Basham,D., Bowman,S., Brooks,K., Brown,D., Brown,S., Chillingworth,T., Churcher,C., Collins,M., Connor,R., Cronin,A., Davis,P., Feltwell,T., Fraser,A., Gentles,S., Goble,A., Hamlin,N., Harris,D., Hidalgo,J., Hodgson,G., Holroyd,S., Hornsby,T., Howarth,S., Huckle,E.J., Hunt,S., Jagels,K., James,K., Jones,L., Jones,M., Leather,S., McDonald,S., McLean,J., Mooney,P., Moule,S., Mungall,K., Murphy,L., Niblett,D., Odell,C., Oliver,K., O'Neil,S., Pearson,D., Quail,M.A., Rabbinowitsch,E., Rutherford,K., Rutter,S., Saunders,D., Seeger,K., Sharp,S., Skelton,J., Simmonds,M., Squares,R., Squares,S., Stevens,K., Taylor,K., Taylor,R.G., Tivey,A., Walsh,S., Warren,T., Whitehead,S., Woodward,J., Volckaert,G., Aert,R., Robben,J., Grymonprez,B., Weltjens,I., Vanstreels,E., Rieger,M., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Dusterhoft,A., Fritzc,C., Holzer,E., Moestl,D., Hilbert,H., Borzym,K., Langer,I., Beck,A., Lehrach,H., Reinhardt,R., Pohl,T.M., Eger,P., Zimmermann,W., Wedler,H., Wambutt,R., Purnelle,B., Goffeau,A., Cadieu,E., Dreano,S., Gloux,S., Lelaure,V., Mottier,S., Galibert,F., Aves,S.J., Xiang,Z., Hunt,C., Moore,K., Hurst,S.M., Lucas,M., Rochet,M., Gaillardin,C., Tallada,V.A., Garzon,A., Thode,G., Daga,R.R., Cruzado,L., Jimenez,J., Sanchez,M., del Rey,F., Benito,J., Dominguez,A., Revuelta,J.L., Moreno,S., Armstrong,J., Forsburg,S.L., Cerutti,L., Lowe,T., McCombie,W.R., Paulsen,I., Potashkin,J., Shpakovski,G.V., Ussery,D., Barrell,B.G. and Nurse,P. TITLE The genome sequence of Schizosaccharomyces pombe JOURNAL Nature 415 (6874), 871-880 (2002) PUBMED 11859360 REMARK Erratum:[Nature 2003 Jan 2;421(6918):94. Cerrutti L [corrected to Cerutti L]] REFERENCE 4 (bases 1 to 2080) AUTHORS Trinkl,H., Lang,B.F. and Wolf,K. TITLE Nucleotide sequence of the gene encoding the small ribosomal RNA in the mitochondrial genome of the fission yeast Schizosaccharomyces pombe JOURNAL Nucleic Acids Res 17 (16), 6730 (1989) PUBMED 2780299 REFERENCE 5 (bases 1 to 2080) AUTHORS Lang,B.F., Cedergren,R. and Gray,M.W. TITLE The mitochondrial genome of the fission yeast, Schizosaccharomyces pombe. Sequence of the large-subunit ribosomal RNA gene, comparison of potential secondary structure in fungal mitochondrial large-subunit rRNAs and evolutionary considerations JOURNAL Eur J Biochem 169 (3), 527-537 (1987) PUBMED 2446871 REFERENCE 6 (bases 1 to 2080) AUTHORS Lang,B.F., Ahne,F. and Bonen,L. TITLE The mitochondrial genome of the fission yeast Schizosaccharomyces pombe. The cytochrome b gene has an intron closely related to the first two introns in the Saccharomyces cerevisiae cox1 gene JOURNAL J Mol Biol 184 (3), 353-366 (1985) PUBMED 4046021 REFERENCE 7 (bases 1 to 2080) AUTHORS Lang,B.F. TITLE The mitochondrial genome of the fission yeast Schizosaccharomyces pombe: highly homologous introns are inserted at the same position of the otherwise less conserved cox1 genes in Schizosaccharomyces pombe and Aspergillus nidulans JOURNAL EMBO J 3 (9), 2129-2136 (1984) PUBMED 6092057 REFERENCE 8 (bases 1 to 2080) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (16-AUG-2024) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 9 AUTHORS Wood,V. and Rutherford,K. CONSRTM PomBase TITLE Direct Submission JOURNAL Submitted (13-MAR-2024) University of Cambridge, PomBase, Hopkins building, Tennis Court Rd, Cambridge, United Kingdom REFERENCE 10 AUTHORS Wood,V. CONSRTM The Schizosaccharomyces pombe Genome Sequencing Consortium TITLE Direct Submission JOURNAL Submitted (29-JUN-2007) European Schizosaccharomyces genome sequencing project, Sanger Institute, The Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_003423). On Jun 21, 2024 this sequence version replaced NM_001021402.2. FEATURES Location/Qualifiers source 1..2080 /organism="Schizosaccharomyces pombe" /mol_type="mRNA" /strain="972h-" /db_xref="taxon:4896" /chromosome="II" gene 1..2080 /gene="php2" /locus_tag="SPOM_SPBC725.11C" /db_xref="GeneID:2541161" /db_xref="PomBase:SPBC725.11c" CDS 109..1113 /gene="php2" /locus_tag="SPOM_SPBC725.11C" /codon_start=1 /product="CCAAT-binding factor complex subunit Php2" /protein_id="NP_595491.1" /db_xref="GeneID:2541161" /db_xref="PomBase:SPBC725.11c" /translation="MNPYEPVEGLYVNAKQYHRILKRREARAKLEERLRGVQTTKKPY LHESRHKHAMRRPRGPGGRFLTADKVSKLRAQEAAEAAANGGSTGDDVNATNANDATV PATVSSEVTHTSEGYADSNDSRPSSISNSSESPAPINSATASMSPANNTSGNNITSPN VRGELDMSGNIAMSGGPTNTASTSGPVPHDMTVLPQTDSNTSNLMSSGSQLGSFATAS TNGNNSTTTTTSSAAHPGSFHKGTNDYSSTLAGNEHSAFPGLDVYHDDSVSAGAAFIP HNPMDSIDHLDVNDPTATGLPVLPASDIDPLNLTGNTQDSMIIGQQTYPSHGSSGTMK " ORIGIN 1 aaaccaacca accgaccaac gagacgaata taccgtaacg agcagaattt tgattcctga 61 gatcctccca atagttagag caattgaaat aagaatagtc attttccaat gaatccatat 121 gagccggtcg aggggcttta cgtgaatgca aagcaatacc atcgaatttt gaaacgtaga 181 gaagctcgcg caaagttaga agagagattg cgtggtgtgc agactacgaa aaaaccatat 241 ttacatgaat caaggcataa gcatgctatg cgacgacctc gtggtcctgg tggccgattc 301 ttgactgctg acaaagtatc aaaattgaga gcgcaggaag ctgcagaggc agctgctaat 361 ggaggaagta caggagacga tgttaatgcc acaaatgcca atgatgccac cgtgcctgca 421 accgtttctt ctgaagtgac tcacacgtct gaaggatatg cggatagcaa tgattcaaga 481 cctagctcta tctccaactc gtctgagtct ccagctccta tcaattctgc cacagcatct 541 atgtctcctg ctaacaatac ttctggaaac aacattactt ctccaaatgt cagaggcgag 601 ctagacatga gtggtaatat tgccatgtcg ggtgggccca ctaataccgc ttccacctcg 661 gggccagtgc ctcatgatat gacagtgctc ccacagaccg actcaaacac atcgaatctt 721 atgtccagtg gttctcaact aggcagtttt gctacagctt ctaccaatgg caacaactct 781 actactacta ctacttcgtc agctgctcat ccagggtcat ttcataaagg tactaatgat 841 tattcatcta cactagctgg aaatgagcat agtgcttttc ctggtctgga tgtgtatcac 901 gatgatagcg tgtctgcagg tgcagctttt ataccacaca atccaatgga ttcgattgat 961 caccttgatg tcaatgatcc tacagccaca ggtctccctg tactaccagc gagcgatatc 1021 gatcctctta atttaacagg caatacccaa gattctatga taattggtca gcaaacatat 1081 ccctcacacg gttcttcagg aaccatgaag tagtcaacta attaaggctg agagagatac 1141 aaaacaatca caagactgtg tataggttgt cgacctaccg acaaagttca atttaggact 1201 gcaatgttgt tggtgatttt ttgagaaaga aacaagtcga aatcactcag tcatggcctt 1261 tttgcatatc atattatact cattattttt ttagtcaccg atttattatc catcaatttg 1321 ttttgacttt tttcgttctg cccaattttt tttttttatt taactcatat ccctcctgct 1381 gtctttttct tattccaata atattttttc tccgacctga ttcttctgtt attgtttttt 1441 tagtgttttt ttttctgttt ctttcaaact ttgatcgtgc agcttaagct ctttcttaaa 1501 tgcaacaata cattctactg tctcatgtca tgcttttgac tctcttgatc tacatcaacc 1561 ttaattagtg acattactta ccaagtagcc agcgtatccc aaccaggcta aataaggaat 1621 taaccatttg gaagccgttg gtgcaagagg ccaccatgtc tttgcaagcc aaccaacaag 1681 tcccgtcaaa atgccgagat cggcaagagc caattttggt tttgctaatc cgtagaacaa 1741 gggcatccaa gcaaagttag cggccaactg tgcaatgtat aaaatggatc catttcgaga 1801 ggcattcgta atcatcaaag ggtcagcctt gtacgccaaa tgggatgcat atcccattgt 1861 taggtatagt agtgtccatg ctggtccaaa ggcagatgca ggggggtgga actttggttg 1921 ctttttgttc tcataatcct ttcttggctt gtaggaattc ccaatgaacc agccgcaggc 1981 gactggaacg agagaagcgg accaccaatt tttggagatg ctagtgaata cttgatagtt 2041 caaatccatc acacttaata atatcgttta ctgttgatta //