Dbfetch
LOCUS NM_001020981 2071 bp mRNA linear PLN 16-AUG-2024 DEFINITION Schizosaccharomyces pombe mannan endo-1,6-alpha-mannosidase (dfg501), mRNA. ACCESSION NM_001020981 VERSION NM_001020981.3 DBLINK BioProject: PRJNA127 BioSample: SAMEA3138176 KEYWORDS RefSeq. SOURCE Schizosaccharomyces pombe (fission yeast) ORGANISM Schizosaccharomyces pombe Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces. REFERENCE 1 (bases 1 to 2071) AUTHORS Schafer,B., Hansen,M. and Lang,B.F. TITLE Transcription and RNA-processing in fission yeast mitochondria JOURNAL RNA 11 (5), 785-795 (2005) PUBMED 15811919 REFERENCE 2 (bases 1 to 2071) AUTHORS Wood,V., Gwilliam,R., Rajandream,M.A., Lyne,M., Lyne,R., Stewart,A., Sgouros,J., Peat,N., Hayles,J., Baker,S., Basham,D., Bowman,S., Brooks,K., Brown,D., Brown,S., Chillingworth,T., Churcher,C., Collins,M., Connor,R., Cronin,A., Davis,P., Feltwell,T., Fraser,A., Gentles,S., Goble,A., Hamlin,N., Harris,D., Hidalgo,J., Hodgson,G., Holroyd,S., Hornsby,T., Howarth,S., Huckle,E.J., Hunt,S., Jagels,K., James,K., Jones,L., Jones,M., Leather,S., McDonald,S., McLean,J., Mooney,P., Moule,S., Mungall,K., Murphy,L., Niblett,D., Odell,C., Oliver,K., O'Neil,S., Pearson,D., Quail,M.A., Rabbinowitsch,E., Rutherford,K., Rutter,S., Saunders,D., Seeger,K., Sharp,S., Skelton,J., Simmonds,M., Squares,R., Squares,S., Stevens,K., Taylor,K., Taylor,R.G., Tivey,A., Walsh,S., Warren,T., Whitehead,S., Woodward,J., Volckaert,G., Aert,R., Robben,J., Grymonprez,B., Weltjens,I., Vanstreels,E., Rieger,M., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Dusterhoft,A., Fritzc,C., Holzer,E., Moestl,D., Hilbert,H., Borzym,K., Langer,I., Beck,A., Lehrach,H., Reinhardt,R., Pohl,T.M., Eger,P., Zimmermann,W., Wedler,H., Wambutt,R., Purnelle,B., Goffeau,A., Cadieu,E., Dreano,S., Gloux,S., Lelaure,V., Mottier,S., Galibert,F., Aves,S.J., Xiang,Z., Hunt,C., Moore,K., Hurst,S.M., Lucas,M., Rochet,M., Gaillardin,C., Tallada,V.A., Garzon,A., Thode,G., Daga,R.R., Cruzado,L., Jimenez,J., Sanchez,M., del Rey,F., Benito,J., Dominguez,A., Revuelta,J.L., Moreno,S., Armstrong,J., Forsburg,S.L., Cerutti,L., Lowe,T., McCombie,W.R., Paulsen,I., Potashkin,J., Shpakovski,G.V., Ussery,D., Barrell,B.G. and Nurse,P. TITLE The genome sequence of Schizosaccharomyces pombe JOURNAL Nature 415 (6874), 871-880 (2002) PUBMED 11859360 REMARK Erratum:[Nature 2003 Jan 2;421(6918):94. Cerrutti L [corrected to Cerutti L]] REFERENCE 3 AUTHORS Wood,V., Gwilliam,R., Rajandream,M.A., Lyne,M., Lyne,R., Stewart,A., Sgouros,J., Peat,N., Hayles,J., Baker,S., Basham,D., Bowman,S., Brooks,K., Brown,D., Brown,S., Chillingworth,T., Churcher,C., Collins,M., Connor,R., Cronin,A., Davis,P., Feltwell,T., Fraser,A., Gentles,S., Goble,A., Hamlin,N., Harris,D., Hidalgo,J., Hodgson,G., Holroyd,S., Hornsby,T., Howarth,S., Huckle,E.J., Hunt,S., Jagels,K., James,K., Jones,L., Jones,M., Leather,S., McDonald,S., McLean,J., Mooney,P., Moule,S., Mungall,K., Murphy,L., Niblett,D., Odell,C., Oliver,K., O'Neil,S., Pearson,D., Quail,M.A., Rabbinowitsch,E., Rutherford,K., Rutter,S., Saunders,D., Seeger,K., Sharp,S., Skelton,J., Simmonds,M., Squares,R., Squares,S., Stevens,K., Taylor,K., Taylor,R.G., Tivey,A., Walsh,S., Warren,T., Whitehead,S., Woodward,J., Volckaert,G., Aert,R., Robben,J., Grymonprez,B., Weltjens,I., Vanstreels,E., Rieger,M., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Dusterhoft,A., Fritzc,C., Holzer,E., Moestl,D., Hilbert,H., Borzym,K., Langer,I., Beck,A., Lehrach,H., Reinhardt,R., Pohl,T.M., Eger,P., Zimmermann,W., Wedler,H., Wambutt,R., Purnelle,B., Goffeau,A., Cadieu,E., Dreano,S., Gloux,S., Lelaure,V., Mottier,S., Galibert,F., Aves,S.J., Xiang,Z., Hunt,C., Moore,K., Hurst,S.M., Lucas,M., Rochet,M., Gaillardin,C., Tallada,V.A., Garzon,A., Thode,G., Daga,R.R., Cruzado,L., Jimenez,J., Sanchez,M., del Rey,F., Benito,J., Dominguez,A., Revuelta,J.L., Moreno,S., Armstrong,J., Forsburg,S.L., Cerutti,L., Lowe,T., McCombie,W.R., Paulsen,I., Potashkin,J., Shpakovski,G.V., Ussery,D., Barrell,B.G. and Nurse,P. TITLE The genome sequence of Schizosaccharomyces pombe JOURNAL Nature 415 (6874), 871-880 (2002) PUBMED 11859360 REMARK Erratum:[Nature 2003 Jan 2;421(6918):94. Cerrutti L [corrected to Cerutti L]] REFERENCE 4 (bases 1 to 2071) AUTHORS Trinkl,H., Lang,B.F. and Wolf,K. TITLE Nucleotide sequence of the gene encoding the small ribosomal RNA in the mitochondrial genome of the fission yeast Schizosaccharomyces pombe JOURNAL Nucleic Acids Res 17 (16), 6730 (1989) PUBMED 2780299 REFERENCE 5 (bases 1 to 2071) AUTHORS Lang,B.F., Cedergren,R. and Gray,M.W. TITLE The mitochondrial genome of the fission yeast, Schizosaccharomyces pombe. Sequence of the large-subunit ribosomal RNA gene, comparison of potential secondary structure in fungal mitochondrial large-subunit rRNAs and evolutionary considerations JOURNAL Eur J Biochem 169 (3), 527-537 (1987) PUBMED 2446871 REFERENCE 6 (bases 1 to 2071) AUTHORS Lang,B.F., Ahne,F. and Bonen,L. TITLE The mitochondrial genome of the fission yeast Schizosaccharomyces pombe. The cytochrome b gene has an intron closely related to the first two introns in the Saccharomyces cerevisiae cox1 gene JOURNAL J Mol Biol 184 (3), 353-366 (1985) PUBMED 4046021 REFERENCE 7 (bases 1 to 2071) AUTHORS Lang,B.F. TITLE The mitochondrial genome of the fission yeast Schizosaccharomyces pombe: highly homologous introns are inserted at the same position of the otherwise less conserved cox1 genes in Schizosaccharomyces pombe and Aspergillus nidulans JOURNAL EMBO J 3 (9), 2129-2136 (1984) PUBMED 6092057 REFERENCE 8 (bases 1 to 2071) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (16-AUG-2024) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 9 AUTHORS Wood,V. and Rutherford,K. CONSRTM PomBase TITLE Direct Submission JOURNAL Submitted (13-MAR-2024) University of Cambridge, PomBase, Hopkins building, Tennis Court Rd, Cambridge, United Kingdom REFERENCE 10 AUTHORS Wood,V. CONSRTM The Schizosaccharomyces pombe Genome Sequencing Consortium TITLE Direct Submission JOURNAL Submitted (29-JUN-2007) European Schizosaccharomyces genome sequencing project, Sanger Institute, The Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_003423). On Jun 21, 2024 this sequence version replaced NM_001020981.2. FEATURES Location/Qualifiers source 1..2071 /organism="Schizosaccharomyces pombe" /mol_type="mRNA" /strain="972h-" /db_xref="taxon:4896" /chromosome="II" gene 1..2071 /gene="dfg501" /locus_tag="SPOM_SPBC1198.06C" /gene_synonym="dfg5" /db_xref="GeneID:2539944" /db_xref="PomBase:SPBC1198.06c" CDS 361..1761 /gene="dfg501" /locus_tag="SPOM_SPBC1198.06C" /gene_synonym="dfg5" /codon_start=1 /product="mannan endo-1,6-alpha-mannosidase" /protein_id="NP_595075.1" /db_xref="GeneID:2539944" /db_xref="PomBase:SPBC1198.06c" /translation="MNIYSVGLFYFFLVFIGAQAMDLDITDYQSIDNTVNIMMKDLMN YWNASSQAFVASYWWVTGATMGALLYNYELFNNDTYVDLISSSLLYNAGSGFDYQPSF EYFNLGNDDQGMWAAAAMDAAEANFSPPNSTEHSWLELTQAAFNRMSGRWDSSTCGGG LRWQAFAWLNGYSYKASVSNALLFQLSSRLARFTNESVYSDWANKIWDWTTDVGFVNT TTYAVYDGADTSTNCTTLDPSQWSYNIGIFMVGAAYMYNYTGETVWRERLDGLISHAT SYFFTDDIAWDPQCEYFDDCNSDQTAFKGIFMQSFGNTIRLAPYTYDTLYPLIQTSAA AAAKQCCGGYSGTSCGIYWFWNNGTWDDNYGVQEQFSALQAVQMLMIEYAPEIATLAS STDNRSNSTYASNVVINDTNTTTTIVVKEKDRGGAGFLTFLSAIFILGASIWALVEDE EGKIPSRGKKGIAISS" ORIGIN 1 ccgacagcac atcacgattt ttcacaagcc ataagttaga actgttctga ttcattcaaa 61 tctttaaaaa tattaaacaa tcttttgttg gcatactgat tcgaaaattt tccatatttt 121 aatttcaaaa ttgggagagt agacggactt tggtaacccg tccagaacat ttgatattca 181 tcaaatactt gggtttattt catggtttat tgtttattca attggttatt ttgtggtatt 241 aattaaacta attataattt tgaatctcct ccttccctca aagaaattta ctttgaaaat 301 ttctcttctt atctaccatc ctcttctaat taataccttt aatctaatta aaccgtaaaa 361 atgaatatct atagtgtggg cttgttttat ttttttctcg ttttcatcgg agcacaagct 421 atggatttgg atataacaga ttatcaatct attgataata ccgtcaatat tatgatgaaa 481 gacttgatga actattggaa tgcaagcagc caggcatttg ttgcttcata ctggtgggtt 541 actggtgcta ctatgggcgc tctgctttat aactatgaac tttttaataa tgacacatat 601 gtcgatctta tttcttcttc tttactttat aatgctggta gcggatttga ctatcagccc 661 tcgtttgaat actttaatct cggaaatgat gatcaaggca tgtgggctgc cgctgcaatg 721 gatgcagcag aggctaactt tagtccccca aattcaacag aacattcatg gttggagtta 781 acgcaagcgg cgtttaatcg tatgtccgga cgttgggatt caagcacgtg tggtggtggt 841 ttacgttggc aagcttttgc ttggttgaat ggatatagct ataaagcttc agttagtaat 901 gcattgctct ttcaactaag ctctagactt gctcgtttta caaacgaaag tgtctactcg 961 gactgggcta acaagatatg ggattggacc accgacgttg gatttgtcaa taccacaact 1021 tatgctgtgt atgatggcgc cgatacttcg acgaattgta caacactgga tccatctcaa 1081 tggtcttaca acataggtat ctttatggtt ggcgctgcat atatgtataa ctacactgga 1141 gaaacagtat ggcgtgaacg gcttgatggc cttattagcc atgctacgtc ttacttcttt 1201 actgatgata tagcttggga cccccaatgt gaatacttcg acgactgtaa ttccgaccaa 1261 actgcattca agggtatttt tatgcaaagt tttggaaata ccattcgact ggctccttat 1321 acttatgata cactgtatcc actaattcag actagtgctg ctgctgctgc taagcaatgt 1381 tgtggtggtt acagtggtac tagttgcggt atttattggt tctggaacaa tgggacgtgg 1441 gatgataatt atggcgttca agagcagttt tctgctttac aagccgttca gatgttaatg 1501 attgaatatg ctcctgaaat agcaaccctt gctagctcga ccgacaatcg atctaacagt 1561 acatatgctt ctaacgttgt gattaacgat accaatacaa cgacaacaat agtagttaaa 1621 gaaaaagatc gtggaggagc aggattttta actttcctct ctgccatttt cattctagga 1681 gcttcaatat gggcccttgt tgaggacgag gagggaaaga taccgagtcg aggtaaaaaa 1741 ggcattgcca tatcttcata ggtgtgcttt ctacgtgcat cacgtttccg cttaatacaa 1801 tttcctgtca tttctctgtt ttttaagctg tttactcatt tttaatatct tttaattcca 1861 cattaaactc aaaagctact gagactttct attgatttgg ctttgtacat atattaatcc 1921 tcccgatgtt ttcaaataca tctatccgaa ttttttttaa ttgcatttcg ttttataata 1981 aaatagttaa ttctcgaaag ttagccagat tagtagagta tatttaattt tcggtatttc 2041 atagtggaat ttttattttc tttttctaga c //