Dbfetch
LOCUS NM_001018490 4158 bp mRNA linear PLN 16-AUG-2024 DEFINITION Schizosaccharomyces pombe RecQ type DNA helicase Rqh1 (rqh1), mRNA. ACCESSION NM_001018490 VERSION NM_001018490.3 DBLINK BioProject: PRJNA127 BioSample: SAMEA3138176 KEYWORDS RefSeq. SOURCE Schizosaccharomyces pombe (fission yeast) ORGANISM Schizosaccharomyces pombe Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces. REFERENCE 1 (bases 1 to 4158) AUTHORS Schafer,B., Hansen,M. and Lang,B.F. TITLE Transcription and RNA-processing in fission yeast mitochondria JOURNAL RNA 11 (5), 785-795 (2005) PUBMED 15811919 REFERENCE 2 (bases 1 to 4158) AUTHORS Wood,V., Gwilliam,R., Rajandream,M.A., Lyne,M., Lyne,R., Stewart,A., Sgouros,J., Peat,N., Hayles,J., Baker,S., Basham,D., Bowman,S., Brooks,K., Brown,D., Brown,S., Chillingworth,T., Churcher,C., Collins,M., Connor,R., Cronin,A., Davis,P., Feltwell,T., Fraser,A., Gentles,S., Goble,A., Hamlin,N., Harris,D., Hidalgo,J., Hodgson,G., Holroyd,S., Hornsby,T., Howarth,S., Huckle,E.J., Hunt,S., Jagels,K., James,K., Jones,L., Jones,M., Leather,S., McDonald,S., McLean,J., Mooney,P., Moule,S., Mungall,K., Murphy,L., Niblett,D., Odell,C., Oliver,K., O'Neil,S., Pearson,D., Quail,M.A., Rabbinowitsch,E., Rutherford,K., Rutter,S., Saunders,D., Seeger,K., Sharp,S., Skelton,J., Simmonds,M., Squares,R., Squares,S., Stevens,K., Taylor,K., Taylor,R.G., Tivey,A., Walsh,S., Warren,T., Whitehead,S., Woodward,J., Volckaert,G., Aert,R., Robben,J., Grymonprez,B., Weltjens,I., Vanstreels,E., Rieger,M., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Dusterhoft,A., Fritzc,C., Holzer,E., Moestl,D., Hilbert,H., Borzym,K., Langer,I., Beck,A., Lehrach,H., Reinhardt,R., Pohl,T.M., Eger,P., Zimmermann,W., Wedler,H., Wambutt,R., Purnelle,B., Goffeau,A., Cadieu,E., Dreano,S., Gloux,S., Lelaure,V., Mottier,S., Galibert,F., Aves,S.J., Xiang,Z., Hunt,C., Moore,K., Hurst,S.M., Lucas,M., Rochet,M., Gaillardin,C., Tallada,V.A., Garzon,A., Thode,G., Daga,R.R., Cruzado,L., Jimenez,J., Sanchez,M., del Rey,F., Benito,J., Dominguez,A., Revuelta,J.L., Moreno,S., Armstrong,J., Forsburg,S.L., Cerutti,L., Lowe,T., McCombie,W.R., Paulsen,I., Potashkin,J., Shpakovski,G.V., Ussery,D., Barrell,B.G. and Nurse,P. TITLE The genome sequence of Schizosaccharomyces pombe JOURNAL Nature 415 (6874), 871-880 (2002) PUBMED 11859360 REMARK Erratum:[Nature 2003 Jan 2;421(6918):94. Cerrutti L [corrected to Cerutti L]] REFERENCE 3 AUTHORS Wood,V., Gwilliam,R., Rajandream,M.A., Lyne,M., Lyne,R., Stewart,A., Sgouros,J., Peat,N., Hayles,J., Baker,S., Basham,D., Bowman,S., Brooks,K., Brown,D., Brown,S., Chillingworth,T., Churcher,C., Collins,M., Connor,R., Cronin,A., Davis,P., Feltwell,T., Fraser,A., Gentles,S., Goble,A., Hamlin,N., Harris,D., Hidalgo,J., Hodgson,G., Holroyd,S., Hornsby,T., Howarth,S., Huckle,E.J., Hunt,S., Jagels,K., James,K., Jones,L., Jones,M., Leather,S., McDonald,S., McLean,J., Mooney,P., Moule,S., Mungall,K., Murphy,L., Niblett,D., Odell,C., Oliver,K., O'Neil,S., Pearson,D., Quail,M.A., Rabbinowitsch,E., Rutherford,K., Rutter,S., Saunders,D., Seeger,K., Sharp,S., Skelton,J., Simmonds,M., Squares,R., Squares,S., Stevens,K., Taylor,K., Taylor,R.G., Tivey,A., Walsh,S., Warren,T., Whitehead,S., Woodward,J., Volckaert,G., Aert,R., Robben,J., Grymonprez,B., Weltjens,I., Vanstreels,E., Rieger,M., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Dusterhoft,A., Fritzc,C., Holzer,E., Moestl,D., Hilbert,H., Borzym,K., Langer,I., Beck,A., Lehrach,H., Reinhardt,R., Pohl,T.M., Eger,P., Zimmermann,W., Wedler,H., Wambutt,R., Purnelle,B., Goffeau,A., Cadieu,E., Dreano,S., Gloux,S., Lelaure,V., Mottier,S., Galibert,F., Aves,S.J., Xiang,Z., Hunt,C., Moore,K., Hurst,S.M., Lucas,M., Rochet,M., Gaillardin,C., Tallada,V.A., Garzon,A., Thode,G., Daga,R.R., Cruzado,L., Jimenez,J., Sanchez,M., del Rey,F., Benito,J., Dominguez,A., Revuelta,J.L., Moreno,S., Armstrong,J., Forsburg,S.L., Cerutti,L., Lowe,T., McCombie,W.R., Paulsen,I., Potashkin,J., Shpakovski,G.V., Ussery,D., Barrell,B.G. and Nurse,P. TITLE The genome sequence of Schizosaccharomyces pombe JOURNAL Nature 415 (6874), 871-880 (2002) PUBMED 11859360 REMARK Erratum:[Nature 2003 Jan 2;421(6918):94. Cerrutti L [corrected to Cerutti L]] REFERENCE 4 (bases 1 to 4158) AUTHORS Trinkl,H., Lang,B.F. and Wolf,K. TITLE Nucleotide sequence of the gene encoding the small ribosomal RNA in the mitochondrial genome of the fission yeast Schizosaccharomyces pombe JOURNAL Nucleic Acids Res 17 (16), 6730 (1989) PUBMED 2780299 REFERENCE 5 (bases 1 to 4158) AUTHORS Lang,B.F., Cedergren,R. and Gray,M.W. TITLE The mitochondrial genome of the fission yeast, Schizosaccharomyces pombe. Sequence of the large-subunit ribosomal RNA gene, comparison of potential secondary structure in fungal mitochondrial large-subunit rRNAs and evolutionary considerations JOURNAL Eur J Biochem 169 (3), 527-537 (1987) PUBMED 2446871 REFERENCE 6 (bases 1 to 4158) AUTHORS Lang,B.F., Ahne,F. and Bonen,L. TITLE The mitochondrial genome of the fission yeast Schizosaccharomyces pombe. The cytochrome b gene has an intron closely related to the first two introns in the Saccharomyces cerevisiae cox1 gene JOURNAL J Mol Biol 184 (3), 353-366 (1985) PUBMED 4046021 REFERENCE 7 (bases 1 to 4158) AUTHORS Lang,B.F. TITLE The mitochondrial genome of the fission yeast Schizosaccharomyces pombe: highly homologous introns are inserted at the same position of the otherwise less conserved cox1 genes in Schizosaccharomyces pombe and Aspergillus nidulans JOURNAL EMBO J 3 (9), 2129-2136 (1984) PUBMED 6092057 REFERENCE 8 (bases 1 to 4158) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (16-AUG-2024) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 9 AUTHORS Wood,V. and Rutherford,K. CONSRTM PomBase TITLE Direct Submission JOURNAL Submitted (13-MAR-2024) University of Cambridge, PomBase, Hopkins building, Tennis Court Rd, Cambridge, United Kingdom REFERENCE 10 AUTHORS Wood,V. CONSRTM The Schizosaccharomyces pombe Genome Sequencing Consortium TITLE Direct Submission JOURNAL Submitted (29-JUN-2007) European Schizosaccharomyces genome sequencing project, Sanger Institute, The Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_003424). On Jun 21, 2024 this sequence version replaced NM_001018490.2. FEATURES Location/Qualifiers source 1..4158 /organism="Schizosaccharomyces pombe" /mol_type="mRNA" /strain="972h-" /db_xref="taxon:4896" /chromosome="I" gene 1..4158 /gene="rqh1" /locus_tag="SPOM_SPAC2G11.12" /gene_synonym="hus2; rad12; rec9" /db_xref="GeneID:2541620" /db_xref="PomBase:SPAC2G11.12" CDS 91..4077 /gene="rqh1" /locus_tag="SPOM_SPAC2G11.12" /gene_synonym="hus2; rad12; rec9" /codon_start=1 /product="RecQ type DNA helicase Rqh1" /protein_id="NP_593092.1" /db_xref="GeneID:2541620" /db_xref="PomBase:SPAC2G11.12" /translation="MTVTKTNLNRHLDWFFRESPQKIENVTSPIKTLDFVKVKVSSSD IVVKDSIPHKSKNVFDDFDDGYAIDLTEEHQSSSLNNLKWKDVEGPNILKPIKKIAVP ASESEEDFDDVDEEMLRAAEMEVFQSCQPLAVNTADTTVSHSTSSSNVPRSLNKIHDP SRFIKDNDVENRIHVSSASKVASISNTSKPNPIVSENPISATSVSIEIPIKPKELSNN LPFPRLNNNNTNNNNDNNAIEKRDSASPTPSSVSSQISIDFSTWPHQNLLQYLDILRD EKSEISDRIIEVMERYPFSSRFKEWIPKRDILSQKISSVLEVLSNNNNSNNNNGNNGT VPNAKTFFTPPSSITQQVPFPSTIIPESTVKENSTRPYVNSHLVANDKITATPFHSEA VVSPLQSNIRNSDIAEFDEFDIDDADFTFNTTDPINDESGASSDVVVIDDEEDDIENR PLNQALKASKAAVSNASLLQSSSLDRPLLGEMKDKNHKVLMPSLDDPMLSYPWSKEVL GCLKHKFHLKGFRKNQLEAINGTLSGKDVFILMPTGGGKSLCYQLPAVIEGGASRGVT LVISPLLSLMQDQLDHLRKLNIPSLPLSGEQPADERRQVISFLMAKNVLVKLLYVTPE GLASNGAITRVLKSLYERKLLARIVIDEAHCVSHWGHDFRPDYKQLGLLRDRYQGIPF MALTATANEIVKKDIINTLRMENCLELKSSFNRPNLFYEIKPKKDLYTELYRFISNGH LHESGIIYCLSRTSCEQVAAKLRNDYGLKAWHYHAGLEKVERQRIQNEWQSGSYKIIV ATIAFGMGVDKGDVRFVIHHSFPKSLEGYYQETGRAGRDGKPAHCIMFYSYKDHVTFQ KLIMSGDGDAETKERQRQMLRQVIQFCENKTDCRRKQVLAYFGENFDKVHCRKGCDIC CEEATYIKQDMTEFSLQAIKLLKSISGKATLLQLMDIFRGSKSAKIVENGWDRLEGAG VGKLLNRGDSERLFHHLVSEGVFVEKVEANRRGFVSAYVVPGRQTIINSVLAGKRRII LDVKESSSKPDTSSRSLSRSKTLPALREYQLKSTTASVDCSIGTREVDEIYDSQMPPV KPSLIHSRNKIDLEELSGQKFMSEYEIDVMTRCLKDLKLLRSNLMAIDDSRVSSYFTD SVLLSMAKKLPRNVKELKEIHGVSNEKAVNLGPKFLQVIQKFIDEKEQNLEGTELDPS LQSLDTDYPIDTNALSLDHEQGFSDDSDSVYEPSSPIEEGDEEVDGQRKDILNFMNSQ SLTQTGSVPKRKSTSYTRPSKSYRHKRGSTSYSRKRKYSTSQKDSRKTSKSANTSFIH PMVKQNYR" ORIGIN 1 agcaactcgc aatttgtgat tttagttttg catttcaaca gaacaatgct tggatgagaa 61 ctccttaatt gcggctgttg gaattggaat atgacagtaa cgaaaacaaa ccttaatcgt 121 catctagatt ggttttttcg tgaaagccct caaaaaatcg aaaatgtcac tagccccatt 181 aaaacattgg acttcgtaaa agttaaagta tcttcttctg atatcgtggt aaaggattca 241 atacctcata agagcaagaa cgtgtttgat gactttgatg atggttatgc tattgattta 301 acagaagagc atcaaagctc ttcattgaat aatttaaaat ggaaagatgt tgaaggaccc 361 aatatcctga aaccaatcaa aaaaattgca gttccagctt ctgaaagcga agaagatttt 421 gatgatgtgg atgaagaaat gttaagagca gctgagatgg aggtttttca aagttgccaa 481 ccattggccg ttaatactgc tgatactacc gtttcgcact caacatctag ctcaaacgtc 541 cctcgttccc taaacaaaat acatgatcct tccagattta tcaaagataa cgacgttgaa 601 aataggattc acgttagtag tgcttcaaaa gttgcaagta tcagcaatac ctctaaacct 661 aacccaatcg tcagcgaaaa tccaatttct gcaacttcgg tatccatcga aatccctatc 721 aaaccaaaag agctatctaa taacttacca ttccctcgtt tgaataacaa caacactaat 781 aataataatg ataataatgc tatagagaag agggattccg cttcgcctac acctagcagt 841 gtctcgtcac aaatttcaat tgattttagt acatggcctc atcaaaattt attgcaatat 901 ctggatatat tacgtgatga aaagagtgaa atcagtgata gaattataga ggttatggaa 961 agatatcctt tttcttcgcg attcaaagag tggattccta agcgggatat tttatctcaa 1021 aaaatttctt cagtacttga agtgctgtcc aacaacaata atagtaataa taataatgga 1081 aataatggta cggttcctaa tgctaaaact ttttttactc ctccttcctc gattacccaa 1141 caggtgccat tcccttctac aataattccg gagtctaccg tgaaagaaaa tagcactcgg 1201 ccatatgtta attcacatct tgttgcaaat gataaaataa cagccactcc ttttcattcg 1261 gaagcagttg tctctccttt gcaaagtaat attcgcaatt ctgatattgc tgaatttgat 1321 gaattcgaca tcgacgatgc cgattttacc tttaatacaa cggatccgat taatgatgag 1381 tcaggtgcct caagtgatgt tgttgtgatc gatgatgaag aagatgatat tgaaaataga 1441 cctttaaacc aagctttgaa agccagtaaa gctgcagttt ccaatgcttc acttcttcaa 1501 tccagttcgc ttgataggcc gttacttggt gaaatgaagg ataaaaacca taaagttttg 1561 atgccatctt tagatgatcc catgctttcg tatccttggt caaaagaagt cttaggttgc 1621 ttgaaacata agtttcatct gaaaggattt cgtaaaaacc aacttgaagc aattaatgga 1681 acgctttctg gtaaagatgt attcattttg atgcctactg gaggaggtaa aagtttatgt 1741 taccagcttc ctgcagttat cgaaggcgga gcatcgcgag gagtcacact cgttatatct 1801 cctcttcttt ctttaatgca agatcaactt gatcacttaa gaaaactaaa tataccttcg 1861 ctaccgctta gtggtgagca gcctgctgat gaaagaagac aggtcatttc gtttcttatg 1921 gctaaaaacg tgttggtaaa gctcctttat gtaacgcctg agggattagc tagtaatggg 1981 gcgattacaa gggtattaaa aagcttatat gaaaggaaac ttttggctag aattgtgatt 2041 gacgaagctc actgcgtcag tcactggggc catgattttc gaccagatta taagcaattg 2101 ggcttactca gagatcgata ccaaggtatt ccttttatgg cgttgacagc cactgcaaat 2161 gaaattgtca aaaaagatat cattaacacc ttgagaatgg agaactgctt ggaattaaag 2221 tctagtttta atagacctaa tcttttttac gaaatcaagc ccaaaaaaga tctttacacc 2281 gagttatatc gcttcattag caacggtcat cttcacgaat ctggtattat ttattgctta 2341 tctagaacta gttgcgaaca agtggcagcc aaacttcgaa atgactatgg tttgaaagca 2401 tggcattatc acgctggtct tgaaaaagtt gaaaggcaga gaattcagaa tgaatggcaa 2461 tctggtagct ataaaataat tgtcgcaaca attgcatttg gtatgggagt tgacaaaggc 2521 gacgttcgct ttgtaatcca ccacagtttt ccgaaatcct tggaaggcta ttatcaagaa 2581 actgggcgcg ctggtcgtga tggaaaacct gcgcattgta ttatgtttta tagctataag 2641 gaccacgtta catttcaaaa gctgataatg agcggagacg gagatgctga gactaaagaa 2701 agacagcgtc aaatgcttag acaagttatt cagttttgcg aaaacaaaac tgactgcagg 2761 agaaagcaag tccttgctta tttcggtgaa aactttgata aagtgcactg cagaaaagga 2821 tgcgacattt gctgcgaaga agcaacatac attaaacagg atatgaccga attttcactg 2881 caagcaatta agttattgaa aagtatttct gggaaagcaa ctcttcttca attgatggat 2941 atttttcgag gcagtaaaag tgccaaaatt gtggagaatg gatgggaccg tttggaaggc 3001 gcaggagtgg gtaagctttt aaatcgtgga gatagtgaac gtttatttca tcatctcgtt 3061 tctgaaggtg tatttgttga gaaagttgag gcaaaccgtc gaggatttgt ctcagcttac 3121 gttgttcccg gcagacaaac aatcattaat tctgtacttg ctggcaaacg caggataatt 3181 ttggatgtca aagagtcatc ttcaaagccg gacacgtcta gtcgctcact ttcacgtagt 3241 aaaacgctgc ctgctcttcg agaatatcag ttgaaatcta ctactgcatc tgttgattgt 3301 tccattggaa cacgtgaagt agatgaaatt tatgattctc aaatgccacc ggtgaaaccc 3361 tcattaattc actcaagaaa caagattgac ttagaagagc tttcaggaca gaaatttatg 3421 agcgaatatg agatagatgt tatgactcgc tgtctaaaag accttaaact tttaagaagc 3481 aacttaatgg ccatagatga cagcagagtg tcttcgtatt tcacagattc cgtattacta 3541 agtatggcca aaaagcttcc caggaatgta aaggaattaa aggaaataca cggtgtaagt 3601 aatgaaaaag ctgtaaattt agggcctaaa tttttacaag tgattcaaaa attcattgac 3661 gagaaagaac aaaatctcga gggaacagag cttgaccctt ctctgcaatc tctggatact 3721 gattacccga ttgacaccaa tgctctaagt ttagaccatg agcaagggtt ttctgatgat 3781 agcgacagtg tttacgaacc ttctagtcct attgaagaag gggatgaaga agtggatggt 3841 caacggaaag acattttaaa ttttatgaat tctcaatctt taacgcaaac tggctcagtt 3901 cctaagcgta aatcaacatc atatactcga ccctctaaat catatcgcca taagcgtggt 3961 agtacaagtt atagtcgaaa aagaaagtat tcgacttcac aaaaagactc tcgaaaaact 4021 tctaaaagtg ccaacacatc attcatacat cccatggtta agcaaaatta tcgttaattt 4081 attcctgtta atttatggtt cgtttattgt acatgtgcgt tcatttaaac attgtctata 4141 atacgttaga aagtaggc //