Dbfetch
LOCUS NM_001018355 1769 bp mRNA linear PLN 16-AUG-2024 DEFINITION Schizosaccharomyces pombe EXS domain-containing protein (erd1), mRNA. ACCESSION NM_001018355 VERSION NM_001018355.3 DBLINK BioProject: PRJNA127 BioSample: SAMEA3138176 KEYWORDS RefSeq. SOURCE Schizosaccharomyces pombe (fission yeast) ORGANISM Schizosaccharomyces pombe Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces. REFERENCE 1 (bases 1 to 1769) AUTHORS Schafer,B., Hansen,M. and Lang,B.F. TITLE Transcription and RNA-processing in fission yeast mitochondria JOURNAL RNA 11 (5), 785-795 (2005) PUBMED 15811919 REFERENCE 2 (bases 1 to 1769) AUTHORS Wood,V., Gwilliam,R., Rajandream,M.A., Lyne,M., Lyne,R., Stewart,A., Sgouros,J., Peat,N., Hayles,J., Baker,S., Basham,D., Bowman,S., Brooks,K., Brown,D., Brown,S., Chillingworth,T., Churcher,C., Collins,M., Connor,R., Cronin,A., Davis,P., Feltwell,T., Fraser,A., Gentles,S., Goble,A., Hamlin,N., Harris,D., Hidalgo,J., Hodgson,G., Holroyd,S., Hornsby,T., Howarth,S., Huckle,E.J., Hunt,S., Jagels,K., James,K., Jones,L., Jones,M., Leather,S., McDonald,S., McLean,J., Mooney,P., Moule,S., Mungall,K., Murphy,L., Niblett,D., Odell,C., Oliver,K., O'Neil,S., Pearson,D., Quail,M.A., Rabbinowitsch,E., Rutherford,K., Rutter,S., Saunders,D., Seeger,K., Sharp,S., Skelton,J., Simmonds,M., Squares,R., Squares,S., Stevens,K., Taylor,K., Taylor,R.G., Tivey,A., Walsh,S., Warren,T., Whitehead,S., Woodward,J., Volckaert,G., Aert,R., Robben,J., Grymonprez,B., Weltjens,I., Vanstreels,E., Rieger,M., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Dusterhoft,A., Fritzc,C., Holzer,E., Moestl,D., Hilbert,H., Borzym,K., Langer,I., Beck,A., Lehrach,H., Reinhardt,R., Pohl,T.M., Eger,P., Zimmermann,W., Wedler,H., Wambutt,R., Purnelle,B., Goffeau,A., Cadieu,E., Dreano,S., Gloux,S., Lelaure,V., Mottier,S., Galibert,F., Aves,S.J., Xiang,Z., Hunt,C., Moore,K., Hurst,S.M., Lucas,M., Rochet,M., Gaillardin,C., Tallada,V.A., Garzon,A., Thode,G., Daga,R.R., Cruzado,L., Jimenez,J., Sanchez,M., del Rey,F., Benito,J., Dominguez,A., Revuelta,J.L., Moreno,S., Armstrong,J., Forsburg,S.L., Cerutti,L., Lowe,T., McCombie,W.R., Paulsen,I., Potashkin,J., Shpakovski,G.V., Ussery,D., Barrell,B.G. and Nurse,P. TITLE The genome sequence of Schizosaccharomyces pombe JOURNAL Nature 415 (6874), 871-880 (2002) PUBMED 11859360 REMARK Erratum:[Nature 2003 Jan 2;421(6918):94. Cerrutti L [corrected to Cerutti L]] REFERENCE 3 AUTHORS Wood,V., Gwilliam,R., Rajandream,M.A., Lyne,M., Lyne,R., Stewart,A., Sgouros,J., Peat,N., Hayles,J., Baker,S., Basham,D., Bowman,S., Brooks,K., Brown,D., Brown,S., Chillingworth,T., Churcher,C., Collins,M., Connor,R., Cronin,A., Davis,P., Feltwell,T., Fraser,A., Gentles,S., Goble,A., Hamlin,N., Harris,D., Hidalgo,J., Hodgson,G., Holroyd,S., Hornsby,T., Howarth,S., Huckle,E.J., Hunt,S., Jagels,K., James,K., Jones,L., Jones,M., Leather,S., McDonald,S., McLean,J., Mooney,P., Moule,S., Mungall,K., Murphy,L., Niblett,D., Odell,C., Oliver,K., O'Neil,S., Pearson,D., Quail,M.A., Rabbinowitsch,E., Rutherford,K., Rutter,S., Saunders,D., Seeger,K., Sharp,S., Skelton,J., Simmonds,M., Squares,R., Squares,S., Stevens,K., Taylor,K., Taylor,R.G., Tivey,A., Walsh,S., Warren,T., Whitehead,S., Woodward,J., Volckaert,G., Aert,R., Robben,J., Grymonprez,B., Weltjens,I., Vanstreels,E., Rieger,M., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Dusterhoft,A., Fritzc,C., Holzer,E., Moestl,D., Hilbert,H., Borzym,K., Langer,I., Beck,A., Lehrach,H., Reinhardt,R., Pohl,T.M., Eger,P., Zimmermann,W., Wedler,H., Wambutt,R., Purnelle,B., Goffeau,A., Cadieu,E., Dreano,S., Gloux,S., Lelaure,V., Mottier,S., Galibert,F., Aves,S.J., Xiang,Z., Hunt,C., Moore,K., Hurst,S.M., Lucas,M., Rochet,M., Gaillardin,C., Tallada,V.A., Garzon,A., Thode,G., Daga,R.R., Cruzado,L., Jimenez,J., Sanchez,M., del Rey,F., Benito,J., Dominguez,A., Revuelta,J.L., Moreno,S., Armstrong,J., Forsburg,S.L., Cerutti,L., Lowe,T., McCombie,W.R., Paulsen,I., Potashkin,J., Shpakovski,G.V., Ussery,D., Barrell,B.G. and Nurse,P. TITLE The genome sequence of Schizosaccharomyces pombe JOURNAL Nature 415 (6874), 871-880 (2002) PUBMED 11859360 REMARK Erratum:[Nature 2003 Jan 2;421(6918):94. Cerrutti L [corrected to Cerutti L]] REFERENCE 4 (bases 1 to 1769) AUTHORS Trinkl,H., Lang,B.F. and Wolf,K. TITLE Nucleotide sequence of the gene encoding the small ribosomal RNA in the mitochondrial genome of the fission yeast Schizosaccharomyces pombe JOURNAL Nucleic Acids Res 17 (16), 6730 (1989) PUBMED 2780299 REFERENCE 5 (bases 1 to 1769) AUTHORS Lang,B.F., Cedergren,R. and Gray,M.W. TITLE The mitochondrial genome of the fission yeast, Schizosaccharomyces pombe. Sequence of the large-subunit ribosomal RNA gene, comparison of potential secondary structure in fungal mitochondrial large-subunit rRNAs and evolutionary considerations JOURNAL Eur J Biochem 169 (3), 527-537 (1987) PUBMED 2446871 REFERENCE 6 (bases 1 to 1769) AUTHORS Lang,B.F., Ahne,F. and Bonen,L. TITLE The mitochondrial genome of the fission yeast Schizosaccharomyces pombe. The cytochrome b gene has an intron closely related to the first two introns in the Saccharomyces cerevisiae cox1 gene JOURNAL J Mol Biol 184 (3), 353-366 (1985) PUBMED 4046021 REFERENCE 7 (bases 1 to 1769) AUTHORS Lang,B.F. TITLE The mitochondrial genome of the fission yeast Schizosaccharomyces pombe: highly homologous introns are inserted at the same position of the otherwise less conserved cox1 genes in Schizosaccharomyces pombe and Aspergillus nidulans JOURNAL EMBO J 3 (9), 2129-2136 (1984) PUBMED 6092057 REFERENCE 8 (bases 1 to 1769) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (16-AUG-2024) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 9 AUTHORS Wood,V. and Rutherford,K. CONSRTM PomBase TITLE Direct Submission JOURNAL Submitted (13-MAR-2024) University of Cambridge, PomBase, Hopkins building, Tennis Court Rd, Cambridge, United Kingdom REFERENCE 10 AUTHORS Wood,V. CONSRTM The Schizosaccharomyces pombe Genome Sequencing Consortium TITLE Direct Submission JOURNAL Submitted (29-JUN-2007) European Schizosaccharomyces genome sequencing project, Sanger Institute, The Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_003424). On Jun 21, 2024 this sequence version replaced NM_001018355.2. FEATURES Location/Qualifiers source 1..1769 /organism="Schizosaccharomyces pombe" /mol_type="mRNA" /strain="972h-" /db_xref="taxon:4896" /chromosome="I" gene 1..1769 /gene="erd1" /locus_tag="SPOM_SPAC227.01C" /gene_synonym="gmn2; sgm2; SPAPB21F2.04c" /db_xref="GeneID:2541909" /db_xref="PomBase:SPAC227.01c" CDS 242..1363 /gene="erd1" /locus_tag="SPOM_SPAC227.01C" /gene_synonym="gmn2; sgm2; SPAPB21F2.04c" /codon_start=1 /product="EXS domain-containing protein" /protein_id="NP_592955.2" /db_xref="GeneID:2541909" /db_xref="PomBase:SPAC227.01c" /translation="MALIEDLNHFINYFPLVLRLFFLVVFGLYSFTLILHLLVINRVD VFSLLHTPLPVNRSQQANAPLWQLSFSLSILGTLLFVIAESLYLISGSDELAYVPVFI FGVIVFMPVHKFWFFQRKVFTRQCLRILGGSYRPDYKFPDVIFSDLLTSYSRVIADLW LAGAILIYVTDSPNNSHRKQYENEVIMSMIAAYPYAIRFRQCLIERSSADNSSDKFWS TLNSIKYFTAFPAIFLGIFAKKRFSFLWFLWNTSSAINSTYSFWWDVSMDWSLPFFKQ PLSIQNWKFGVRRLFPTFTFAVVSAIDFVLRMAWVVRVLPEHQSAFFTTDFGIFIMQF LEVFRRCVWVFFRIEAEASKSLAYVNISDRSDIPTIHPD" ORIGIN 1 acaacgcacc tctcgacatt caagcagtaa tgctaatctc tatcatcata gaacccttta 61 tttgataatt ttcattattt atgagtcaag ttttatcatc ataattagaa gatcggctgt 121 acaacttgac tcgacatatt ttacactgtt tgcgtctctc tttgtaaaaa ttcatccatt 181 gtataattgc attcaagttt attttaatat attatttcag attttctccc ttttatttaa 241 tatggcgttg atagaggatt tgaatcactt tatcaattat tttcctctag tattgagatt 301 attcttcttg gtcgtatttg gtctttattc tttcacattg atattacatc tattagtgat 361 aaatagggtc gacgtgttct cattattaca tactccgttg cctgtcaatc gatcacagca 421 agctaatgct cctctatggc aattgtcatt ctccctatct atattaggta ctctactttt 481 cgtaatagcc gaatccttat atttgatttc tgggtctgat gaattggcat acgtccccgt 541 ttttattttt ggtgttattg tttttatgcc tgtacataag ttctggttct tccagagaaa 601 ggtgtttact cgacagtgtc taaggatttt gggaggaagc tacagacctg attacaaatt 661 tcccgatgtt atattttctg atttattgac ttcttactcg agggtcattg ctgatctctg 721 gctagctgga gcaatcttga tttacgtaac tgactcacct aataactctc atagaaaaca 781 atatgaaaat gaggttatta tgtcaatgat tgcagcgtat ccatacgcta tccgatttcg 841 tcaatgtttg attgaaagaa gctctgcgga taattcatca gataaatttt ggagtacatt 901 gaattctatc aagtatttca ctgcttttcc agcgatattc cttgggattt ttgcaaagaa 961 aagatttagc tttctatggt ttttatggaa tacctcttca gctataaatt caacttattc 1021 attttggtgg gatgtttcaa tggattggag tcttcccttt tttaagcaac cgttatcaat 1081 ccaaaactgg aaatttgggg ttcggcgttt attcccaaca ttcacatttg cagttgtaag 1141 tgcgattgat tttgttttgc gaatggcctg ggtagttcgc gttttgcctg aacatcaatc 1201 cgcgtttttt accaccgact ttgggatctt tataatgcaa tttcttgaag ttttccgacg 1261 ttgtgtttgg gttttttttc ggatagaagc cgaagcttct aaatcattgg cctatgttaa 1321 cataagtgat cgtagtgaca tcccgacaat acatccagat taaatggaaa tgattgaagt 1381 tactattgtc acatatgtgt aggtattaca tctgcaacct tttcaaaaaa tttctttctt 1441 tagggcgtat caatttaccg ttctattatt tgcttggcat ataatatgtt tttcattctt 1501 ttattgcgct aatggtttaa tattgcaagt acattgtcat ttgcggactt gcaacacaat 1561 ggcaccgtct cgctgaattg ggtttactta aagtaagaaa gttacttaaa attttattat 1621 ggatatatac ttttatttgt tacatgggaa tcgtaatggg tttgaacaaa tttcaccatc 1681 ttttactgat taagttgttg agtcaaaagt ttaaaacatg aatttaataa taaataaata 1741 aatcaagctc tctttttgca tactgaata //