Dbfetch

Dbfetch

ID   HLA02378; SV 1; standard; DNA; HUM; 822 BP.
XX
AC   HLA02378;
XX
SV   HLA02378.1
XX
DT   30-OCT-2005 (Rel. 2.12.0, Created, Version 1)
DT   12-JAN-2006 (Rel. 2.12.0, Last Updated, Version 1)
XX
DE   HLA-B*39:36, Human MHC Class I sequence (partial)
XX
KW   Human MHC; HLA; Class I; HLA-B; Allele; HLA-B*39:36;
XX
OS   Homo Sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Vertebrata; Mammalia; Eutheria; Primates;
OC   Catarrhini; Hominidae; Homo.
XX
CC   --------------------------------------------------------------------------
CC   IPD-IMGT/HLA Release Version 3.57.0
CC   --------------------------------------------------------------------------
CC   Copyrighted by the IPD-IMGT/HLA Database, Distributed under the Creative
CC   Commons Attribution-NoDerivs License, see;
CC   http://www.ebi.ac.uk/ipd/imgt/hla/licence/ for further details.
CC   --------------------------------------------------------------------------
CC   The sequence below is the official allele sequence as approved by the
CC   WHO Nomenclature Committee for Factors of the HLA System.
CC   Any cross references may differ from the sequence shown below.
CC   --------------------------------------------------------------------------
XX
RN   [1]
RP   1-822
RX   PUBMED; 16634875.
RA   Yan LX, Zhu FM, Lv QF, Zhang W, He J;
RT   "Identification of a novel HLA-B*3936 allele by sequence-based typing.";
RL   Tissue Antigens 67:341-342(2006).
XX
RN   [2]
RP   1-822
RX   PUBMED; 34761547.
RA   Yang KL, Li CC, Lin PY;
RT   "Recognition of the HLA-B*39:36 allele in a Taiwanese bone marrow donor.";
RL   HLA 99:207-208(2022).
XX
DR   EMBL; AH015360; AH015360.2.
DR   EMBL; DQ242650; DQ242650.1.
DR   EMBL; DQ242651; DQ242651.1.
DR   EMBL; DQ242652; DQ242652.1.
DR   EMBL; MZ496225; MZ496225.1.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..822
FT                   /organism="Homo sapiens"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:9606"
FT                   /ethnic="Asian"
FT                   /cell_line="411922"
FT                   /cell_line="CB9216"
FT   CDS             join(<1..270,271..546,547..822)
FT                   /codon_start=3
FT                   /partial
FT                   /gene="HLA-B"
FT                   /allele="HLA-B*39:36"
FT                   /product="MHC Class I HLA-B*39:36 sequence"
FT                   /translation="SHSMRYFYTSVSRPGRGEPRFISVGYVDDTQFVRFDSDAASPREE
FT                   PRAPWIEQEGPEYWDRNTQICKTNTQTDRESLRNLRGYYNQSEAGSHTLQRMYGCDVGP
FT                   DGRLLRGHNQFAYDGKDYIALNEDLSSWTAADTAAQITQRKWEAAREAEQWRAYLEGTC
FT                   VEWLRRYLENGKETLQRADPPKTHVTHHPISDHEATLRCWALGFYPAEITLTWQRDGED
FT                   QTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRW"
FT   exon            1..270
FT                   /number="2"
FT   exon            271..546
FT                   /number="3"
FT   exon            547..822
FT                   /number="4"
SQ   Sequence 822 BP; 182 A; 255 C; 274 G; 111 T; 0 other;
     gctcccactc catgaggtat ttctacacct ccgtgtcccg gcccggccgc ggggagcccc        60
     gcttcatctc agtgggctac gtggacgaca cgcagttcgt gaggttcgac agcgacgccg       120
     cgagtccgag agaggagccg cgggcgccgt ggatagagca ggaggggccg gaatattggg       180
     accggaacac acagatctgc aagaccaaca cacagactga ccgagagagc ctgcggaacc       240
     tgcgcggcta ctacaaccag agcgaggccg ggtctcacac cctccagagg atgtacggct       300
     gcgacgtggg gccggacggg cgcctcctcc gcgggcataa ccagttcgcc tacgacggca       360
     aggattacat cgccctgaac gaggacctga gctcctggac cgcggcggac accgcggctc       420
     agatcaccca gcgcaagtgg gaggcggccc gtgaggcgga gcagtggaga gcctacctgg       480
     agggcacgtg cgtggagtgg ctccgcagat acctggagaa cgggaaggag acgctgcagc       540
     gcgcggaccc cccaaagaca catgtgaccc accaccccat ctctgaccat gaggccaccc       600
     tgaggtgctg ggccctgggc ttctaccctg cggagatcac actgacctgg cagcgggatg       660
     gcgaggacca aactcaggac accgagcttg tggagaccag accagcagga gacagaacct       720
     tccagaagtg ggcagctgtg gtggtgcctt ctggagaaga gcagagatac acatgccatg       780
     tacagcatga ggggctgccg aagcccctca ccctgagatg gg                          822
//