Dbfetch

Dbfetch

ID   HLA02208; SV 3; standard; DNA; HUM; 677 BP.
XX
AC   HLA02208;
XX
SV   HLA02208.3
XX
DT   31-MAY-2005 (Rel. 2.10.0, Created, Version 1)
DT   14-JAN-2016 (Rel. 3.23.0, Last Updated, Version 3)
XX
DE   HLA-DQB1*03:16, Human MHC Class II sequence (partial)
XX
KW   Human MHC; HLA; Class II; HLA-DQB1; Allele; HLA-DQB1*03:16;
XX
OS   Homo Sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Vertebrata; Mammalia; Eutheria; Primates;
OC   Catarrhini; Hominidae; Homo.
XX
CC   --------------------------------------------------------------------------
CC   IPD-IMGT/HLA Release Version 3.57.0
CC   --------------------------------------------------------------------------
CC   Copyrighted by the IPD-IMGT/HLA Database, Distributed under the Creative
CC   Commons Attribution-NoDerivs License, see;
CC   http://www.ebi.ac.uk/ipd/imgt/hla/licence/ for further details.
CC   --------------------------------------------------------------------------
CC   The sequence below is the official allele sequence as approved by the
CC   WHO Nomenclature Committee for Factors of the HLA System.
CC   Any cross references may differ from the sequence shown below.
CC   --------------------------------------------------------------------------
XX
DR   EMBL; DQ026226; DQ026226.1.
DR   EMBL; JN132208; JN132208.1.
DR   EMBL; KU053506; KU053506.1.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..677
FT                   /organism="Homo sapiens"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:9606"
FT                   /ethnic="African descent, Undefined"
FT                   /cell_line="05-0132"
FT                   /cell_line="NT01152"
FT                   /cell_line="NT01294"
FT   CDS             join(<1..270,271..552,553..663,664..677)
FT                   /codon_start=3
FT                   /partial
FT                   /gene="HLA-DQB1"
FT                   /allele="HLA-DQB1*03:16"
FT                   /product="MHC Class II HLA-DQB1*03:16 sequence"
FT                   /translation="DFVYQFKAMCYFTNGTERVRYVTRYIYNREEYARFDSDVEVYRAV
FT                   TPLGQPDAEYWNSQKEVLERTRAELDTVCRHNYQLELRTTLQRRVEPTVTISPSRTEAL
FT                   NHHNLLVCSVTDFYPAQIKVRWFRNDQEETTGVVSTPLIRNGDWTFQILVMLEMTPQHG
FT                   DVYTCHVEHPSLQNPITVEWRAQSESAQSKMLSGIGGFVLGLIFLGLGLIIHHRSQKGL
FT                   LH"
FT   exon            1..270
FT                   /number="2"
FT   exon            271..552
FT                   /number="3"
FT   exon            553..663
FT                   /number="4"
FT   exon            664..677
FT                   /number="6"
SQ   Sequence 677 BP; 153 A; 196 C; 201 G; 127 T; 0 other;
     aggatttcgt gtaccagttt aaggccatgt gctacttcac caacgggacg gagcgcgtgc        60
     gttatgtgac cagatacatc tataaccgag aggagtacgc acgcttcgac agcgacgtgg       120
     aggtgtaccg ggcggtgacg ccgctggggc agcctgacgc cgagtactgg aacagccaga       180
     aggaagtcct ggagaggacc cgggcggagt tggacacggt gtgcagacac aactaccagt       240
     tggagctccg cacgaccttg cagcggcgag tggagcccac agtgaccatc tccccatcca       300
     ggacagaggc cctcaaccac cacaacctgc tggtctgctc agtgacagat ttctatccag       360
     cccagatcaa agtccggtgg tttcggaatg accaggagga gacaaccggc gttgtgtcca       420
     ccccccttat taggaacggt gactggacct tccagatcct ggtgatgctg gaaatgactc       480
     cccagcatgg agacgtctac acctgccacg tggagcaccc cagcctccag aaccccatca       540
     ccgtggagtg gcgggctcag tctgaatctg cccagagcaa gatgctgagt ggcattggag       600
     gcttcgtgct ggggctcatc ttcctcgggc tgggccttat tatccatcac aggagtcaga       660
     aagggctcct gcactga                                                      677
//