Dbfetch
ID HLA02080; SV 3; standard; DNA; HUM; 11516 BP.
XX
AC HLA02080;
XX
SV HLA02080.3
XX
DT 31-JAN-2005 (Rel. 2.09.0, Created, Version 1)
DT 16-JAN-2024 (Rel. 3.55.0, Last Updated, Version 3)
XX
DE HLA-DPB1*108:01, Human MHC Class II sequence
XX
KW Human MHC; HLA; Class II; HLA-DPB1; Allele; HLA-DPB1*108:01;
XX
OS Homo Sapiens (human)
OC Eukaryota; Metazoa; Chordata; Vertebrata; Mammalia; Eutheria; Primates;
OC Catarrhini; Hominidae; Homo.
XX
CC --------------------------------------------------------------------------
CC IPD-IMGT/HLA Release Version 3.57.0
CC --------------------------------------------------------------------------
CC Copyrighted by the IPD-IMGT/HLA Database, Distributed under the Creative
CC Commons Attribution-NoDerivs License, see;
CC http://www.ebi.ac.uk/ipd/imgt/hla/licence/ for further details.
CC --------------------------------------------------------------------------
CC The sequence below is the official allele sequence as approved by the
CC WHO Nomenclature Committee for Factors of the HLA System.
CC Any cross references may differ from the sequence shown below.
CC --------------------------------------------------------------------------
XX
DR EMBL; AY855160; AY855160.1.
DR EMBL; OK432439; OK432439.1.
DR EMBL; OK632537; OK632537.1.
DR EMBL; OK632565; OK632565.1.
DR EMBL; OK632567; OK632567.1.
DR EMBL; OY101334; OY101334.1.
XX
FH Key Location/Qualifiers
FH
FT source 1..11516
FT /organism="Homo sapiens"
FT /mol_type="genomic DNA"
FT /db_xref="taxon:9606"
FT /ethnic="European, Undefined"
FT /cell_line="2004/0716"
FT /cell_line="DKMS-LSL_ID20894130"
FT /cell_line="HG00044369"
FT /cell_line="HG00044616"
FT /cell_line="HG00044700"
FT /cell_line="HG00044701"
FT CDS join(367..466,5003..5266,9265..9546,10094..10204,
FT 10534..10553)
FT /codon_start=1
FT /gene="HLA-DPB1"
FT /allele="HLA-DPB1*108:01"
FT /product="MHC Class II HLA-DPB1*108:01 sequence"
FT /translation="MMVLQVSAAPRTVALTALLMVLLTSVVQGRATPENYLFQGRQECY
FT AFNGTQRFLERYIYNREEFVRFDSDVGEFRAVTELGRPDEDYWNSQKDLLEEKRAVPDR
FT MCRHNYELGGPMTLQRRVQPRVNVSPSKKGPLQHHNLLVCHVTDFYPGSIQVRWFLNGQ
FT EETAGVVSTNLIRNGDWTFQILVMLEMTPQQGDVYTCQVEHTSMDSPVTVEWKAQSDSA
FT RSKTLTGAGGFVLGLIICGVGIFMHRRSKKVQRGSA"
FT UTR 1..366
FT exon 367..466
FT /number="1"
FT intron 467..5002
FT /number="1"
FT exon 5003..5266
FT /number="2"
FT intron 5267..9264
FT /number="2"
FT exon 9265..9546
FT /number="3"
FT intron 9547..10093
FT /number="3"
FT exon 10094..10204
FT /number="4"
FT intron 10205..10533
FT /number="4"
FT exon 10534..10553
FT /number="5"
FT UTR 10554..11516
SQ Sequence 11516 BP; 3134 A; 2537 C; 2980 G; 2865 T; 0 other;
taatccctgt agatgggcca gcagaatatt tgagatcacc ttcagagcaa agaaaacgca 60
taatctcccc aaacatcatg acttatctga ctggttaaaa tgagtatcac tgtctttcct 120
ccgtcatctt aagtgcatca caggctttat attttcagac ctttcatact aactttctgc 180
ctagtgagca atgactcata caaagctcag tgtccattgg ttcttttctc agactctgtc 240
caatcccagg gtcacagaag actacttggg ttcatggtct ctaatatttc aaacaggagc 300
tccctttagc gagtccttct tttcctgact gcagctcttt tcattttgcc atccttttcc 360
agctccatga tggttctgca ggtttctgcg gccccccgga cagtggctct gacggcgtta 420
ctgatggtgc tgctcacatc tgtggtccag ggcagggcca ctccaggtaa gagccgaact 480
gccattcttg gagggtctgg ctcagggaac aattcctagg ggacgttatc tttaagggat 540
caaattctga gacaggctgc gggggctcct gccctaaggc agtgtcctct cttcccagct 600
agagaaagag gttcatcccc tataggatag cttgctaccc tactggccta ttctctctcc 660
aaggacatgg gtacagtaaa cagagagagg tgcccagtgg tcagtatgct tgtctttggg 720
gaaaatggga ccaagaggtc ctggataacc ttggacagac aaggtttgca gagagagaag 780
ttggcaagtg caggctcctg ggcgtgttca tgtctgcatc cagcctggag gggactcagg 840
cagagagccc taagctggag tgtccaggct ctgaggatca ctgaggattc agtgctcacg 900
aagaatgcct cttattcccc agggtggagc aggagcccac atcccttgga caattaagga 960
gagaagggag ggagggggat aggttttagc ccctgaaggc attctcatta aaggtacttc 1020
tcccagcctc cccagaactt ggttagggta ctagagtggg ttgcgacttg taggaagaat 1080
gagatgaggt tgtgtgggtg catgacaggg attgagtgta ggttatcaga cagccaagga 1140
agcagtaacc aagtgaaaaa tctcttcttc ctgctgcctc cctgtggctg gtgtaatatt 1200
atggcatcta tgatccattg tttttctctc aggatactct caggatattt ctttttatat 1260
atatatatac tttaagttct agggtacatg tgcacaacgt gcaggtttgt tacatatgta 1320
tacatgtgcc atgttggtgt gctgcaccca ttaactcgtc atttacatta ggtatatttc 1380
ctaatgctat ccctcccccc tccccccacc ccacaacagg ccccggtgta tgatgttccc 1440
cttcctgtgt ccatgtgttc tcattgttca gttcccacct atgagtgaga acatgtggtc 1500
tttggttttc tgtccttgca atagtttgct gtgaatgatg gtttccagct tcctccatgt 1560
ccctacaaag gacatgaact catccttttt tatggctgca cagtattcca tggtgtatat 1620
gtgtgcattt tcttaatcca gtctatcact gatggacagt tgggttggtt ccaagtcttt 1680
gctattgtga atagtgccgc tataaacata tgtgtgcatg tgtctttata gcagcatgat 1740
ttataatcct ttgggtatat acccagtaat gggatggctg ggtcaaatgg tatttctagt 1800
tctagatcct tgaggaattg ccacaatgtc ttgagatacc atctcacacc agttaaaatg 1860
gcgatcatta aaaagtcagg aaacaacagg tgctggagag gatgtggaga aataggaaca 1920
cttttactct gttggtggga ctgtaaacta gttcaaccat tgtactctca ggacatttct 1980
agtccaaatt tacaccaaca ctctgagagg aaggactgca aagtaggtac cttagttttc 2040
cactgacttc cacttttcct gcttacaccc ttcctcctag acctctccac acccctccta 2100
ggacacacct aaaaggtact gacatcatgt cacctcctca tctttcaggg tagcaaggtt 2160
ggaatctcct gaatacagcc cctcaagccc taaaacctct tatctattac cttgggttca 2220
ttgtccagga aggggaggag aacttgaact tgtagtcaca gaagggtgct gagaactaac 2280
cagcaggacg gctcagccct gggaactgca gaggggtgag gctggggaga gaggaggctg 2340
gagcagcact ggtgacactg aacagtgtca ggaggaagtg acggatgcag cgcccccatc 2400
ccataggcag agctgtcatg tgggatgagg gacagtgttg ggagccacca aggaaaccca 2460
gaggtggggg agcagagagc agaagggagc atgtgatgct ggacagtgaa agggaggaca 2520
ggcaaaggct gggttgaggt ttgtaggggg aatgagatga ggcagtggag ccatgtgaca 2580
gggactgagg gtagattact ggagctccct gcgtagaatg aatgttcaat caaaatttgc 2640
tggagggaga gctggagcca taggggagtg ggtaaagtgg gcagggctga ttccacaatt 2700
ccctgcatgc tcccccaact ccacacacat ccccaacctc aaacagggca caagaccaaa 2760
gggctgagga gccaggctat agcttaaaga ggctggggga gaaaagcttg gctgagacaa 2820
cccataggga gctagaggtt tttaatatat cctattctga ataagagacg aattcattca 2880
gatcagtggt ttcaaaccgt gctctgggca actcaattgc taagggttcc acaaacagga 2940
taaagtttct tatatacaaa aaaaaatgaa ggtttcaaat tacaccataa aacccctcat 3000
tgcttatgtc tacttggcag gtaaaattcc atttcaaaag ttaaatgtac ttaaaaaatt 3060
acctaagact gggtaaatta aaaaaattaa atgttgcaaa gaaaaaattc aaaattctta 3120
ttcttgaatg aaaaacgttc tcttactggt gattgaggag gagaaacaaa gactaacaaa 3180
tgaaaatggg agaatccaca ctcagagtgg ggcaactgaa caggcagggg cggatggatg 3240
gcagaggagg aggaatctgg actcaaggag ctggggggct ctgggcctgg aattttaggg 3300
tctggggccc aaggcaccag gagaagaggc aggtcaggat atctgagtca agacctggga 3360
tcttgcctta gcaatgacac tggagactaa aggtggactc catggtgccc ttgagcccag 3420
ccctacccca tctccactat cctctgccac cagctgtgca acttctgcta ggggtgaggt 3480
taataaactg gagaagttaa tttgtggagc atgaaacaga tgagcagaac aatcacagca 3540
ccttaatttc cccagtgtgc ccaagaacag agcaggcctg aagatactca aacagaaaca 3600
aacatgtgcc gtgtcactga taattctgtg tagacacaca cctgccagac actgctcatg 3660
gcactcccta ggaagaacag catgtgggaa aggctgccaa aattgttcat gtaaaaatta 3720
catcaatgct gtcttcctcg gtgctgccta tgcagctggc agccatctct tcctccacat 3780
catggcctcc ctcagactcc tcatgaagga taagatcctc aaaaagagga ccaacaagtt 3840
catgaggcac caatcagact gaaatgtcaa aattaagcat aactggcgga aacccagagg 3900
tcttaacagt agggttcgta gaaggtccaa gggccagatc ttgatgccca acattgctta 3960
tgggagcaac aacaacaaca aaaaaaacat gctgcccagt ggcttccaga agtttctggt 4020
ccacagcctc aaggagctga aagtgctgct gatgtgcaac aaatcttact gtgctgagat 4080
cgctcacaaa atttcctcca gaactgcaaa gtcatcatgg aaagagtcac ccagccggcc 4140
atcagagtca ccaaccccag taccagggtg cacagctaag aaaatgagta gaaagttcat 4200
gtccacgttt tgtgtgtaaa taaaaccata aaaactgcca aaaaaaatta catcaatgcc 4260
tctaaaccca aaggactcta cccccacagg tccctggttg ttgtggtgat tttcattgtg 4320
taaaatactt tccacatctt ttgacaccaa gtctttctgc agccatgttt gaaaattaac 4380
tttcaggcta cagagtcttt cttataccaa agttgaagaa agttttaaga aatatatttc 4440
tacatctcct acatgcaaaa caacaggagc aagttgagga attctcaaga aactggtcga 4500
gaagagagag cgcttagcta tggaaaagag aaagaaggaa gggagggctt cctggaggag 4560
gtggcatttg aaccaggact gacatcagga tggaaatgtc agtcagggag ttaagtaggg 4620
ggagcagctc cgccctccac gtccccagct cctcccgccc ctgttttttc tcccagtgac 4680
cccacgtgaa acgtctccgc ctcctccagc caccagcaga agggactgcc ttcccctcag 4740
tgctcgcccc tccctagtga tcactcagtg cccctgagct cattcttttc agtaaattct 4800
ctctctgcgt ggtgagaaaa caggcctgga gaggctctgc gacccgctta ggaccacaga 4860
actcggtact aggaaaactc ctattttaaa atccagccct gggtgggaag atttgggaag 4920
aatcgttaat attgagagag agagggagaa agaggattag atgagagtgg cgcctccgct 4980
catgtccgcc ccctccccgc agagaattac cttttccagg gacggcagga atgctacgcg 5040
tttaatggga cacagcgctt cctggagaga tacatctaca accgggagga gttcgtgcgc 5100
ttcgacagcg acgtggggga gttccgggcg gtgacggagc tggggcggcc tgatgaggac 5160
tactggaaca gccagaagga cctcctggag gagaagcggg cagtgccgga caggatgtgc 5220
agacacaact acgagctggg cgggcccatg accctgcagc gccgaggtga gtgagggctt 5280
tgggccggcg gtcccagggc agccccgcgg gcccgtgccc agggcgcagg agcagccggg 5340
ttggcctaag ggaccttagt gccgggcgga aaggggactt tgggttgggg attcatgggg 5400
ggagcccatc tggagcttgt caggggagcg agcgcgggga cctggactgg gctgagcatg 5460
gagtgaggag gacgagagca gagagacccc cgggacttca tcaggcctgg cagctgactg 5520
catgtggggt gaaaaaagga agccacagga cagcgcacaa gggtatggtg tggagatgga 5580
ggtggagatg gcacagcagg ccacacagag aagaaaccta cagggaggta gctgggtttg 5640
aggtgcttga ggggcagatg ggtggtctga tgggcaggta gacagaaggg tctgcagccg 5700
gggaggagac tgagatacat gagaccatcc agggagaggg gacccagggg gaagagcaaa 5760
ggaccggatc ctgggaactg gacagttgtg atttggccaa gacagaaaag cctgtgaaag 5820
agaccaaaaa aacccaagtg cagtgtgagg agaggcccgc agagaagagt cttggaagct 5880
gaggggaggt gacctcagca gcacagtgga cagcggtgcc agtgacttgg gaaggtcaga 5940
aaacagaaga tggaaagtgg gtttggaaac cagggagacc tggggagagc aggttggccg 6000
cagcggcagg agctggaatg ggagggggtg catgaggctg agtgtggcgc atcctcctcg 6060
gggctgagat ggattttact tgtcttgggt tccccacggc tgtcacaggg cagtgtctca 6120
gttcattcgt ctttttcctt caggaagtct gggtgtaaag ggatggagag aggtgaggtg 6180
tgtgcagtaa gaggatttct caaggatggg acaggaaggc cttggagctt tggcttcctc 6240
ctgtgaactt gtggggtggg gagcctggtg caccaacctg agggacttga gggagtagta 6300
tcaggatgtg ggattgagcc ctggaccttt tttctagaaa gaggaaaaaa atgaagggag 6360
gaggaggagg aagctgggga gatcacacct ttgattttct tgttcctgga aagtgaaagg 6420
aagttcacct gctatgagtg agaaggtgga cacactgggt ggggatgagg tgagtgacat 6480
gagcttagga aagttgctga ggtaattggt tgagagaggt gttcaaataa aaataacgca 6540
attggcaaaa actgttacta agactttgta gaggcaccaa tcagtgacat ggcagcattt 6600
tctttcacag taatcaactg ccagattgca gacagccctg atgccagcct aaggagtgtg 6660
ggtttctcct ccaggcccgc aggtccccaa cctcactcct ctgaagactc ttctggagat 6720
cctctgtgat gcacagatct ccagactcag tgcccccaga ctcagattcc ctgggtgggg 6780
aggtctgggg atctctgctt gtaatcagct ccctagaggt tcccatgtag ccagataagt 6840
attgtcagaa cactgaagat ttttgaaaaa tgaaaaagag aaggttggag atgtgtcttc 6900
agaagactac taagggtgct ggctagagga gggaccagag gcagggagat gaggtaggaa 6960
actgctatta tttgtcaggg aaattgcaat caaggcatga gttagaacag ggaaaacaca 7020
gaggcaaggg agaggtggaa gggggaggaa agaagtagtg acaattccag ggtggatgtc 7080
cacccaaatc tagaagtaat tgagcaaatg ttttctgggc attagagaag gcaactagaa 7140
caaacaggaa tccttgcctt ggtgaaatgt atttgaactg ggtcagaaat gaggccattg 7200
ggtatcaggc cttaactcca gcgcaccctg gaggtcactg atgtggctcc aggctgacct 7260
gctcctgtca aagaatattg agcaagatgc ctctcgtgga atgttctggg accttaaaac 7320
agatacccaa gtattccccc tgatttcatg gttcccagaa gctctatggg gaagaaattg 7380
taggtaattc acaactgaga tttagacata agttgaatag tgtaatggac attgagttaa 7440
ccgaggtaat gaagtagtga gacacaggtg cccctgaaat aaactcacat tgagggaaga 7500
ggctgacaat gtggatcagt ctgaaaacaa ggcaaaaata caatagggag taagggttgt 7560
gtgtcagttc aagactgtac ttttacctgg cccagcgcca tgttagggta tttgtgttct 7620
ccaggaagta gaaaggaaag aactgagtga ttagggacct agaagactaa tttgagacat 7680
tcctcttgat gagctgttct ctagggtagt cctctgaaag agctgttctc tagtggatct 7740
ccctgaatga actgttctct aggagcactt gacccttttc tgtgtttgtt ttttgttttg 7800
tgtttgtgtt tgtttttgag acaggttctc actttgtctc ccaggctgga gtgctgtggc 7860
accatcatgg ctcactgcag cctcaacctc ctgggctcaa gtgatcctcc tgcctcagcc 7920
tcccatgtag ctagaactac agatacacgt accaccatgt ctggctaatt tatttttctt 7980
tttagagatg ggttctcact atgttgccca ggccggtctc aaaaccctgg gctcaagtga 8040
tcctcatgcc tcaacctccc aaagtgctaa gattataggc atgaccacca tgcctggcct 8100
tttctgcttt ctgaggagga aaaaggtact ggtggcagag atccaaaaga aaagttgcca 8160
gtggcagtgt ggaaattcac ctgagaacaa caggacaagc tggggcacaa atgcaaagat 8220
gcagagggag gcaacacctg gtcatctgtg agaccttcat gggacctgaa gacgcagcac 8280
agaggaggaa cttgaaaaag gacgggattt ctactactca agcatgtagg agctcaggat 8340
attctgtaaa tatgaagatt ttgagttttt gtaggtgagg taaaaaaata cataggtttt 8400
ttacagaata agacatgtaa agctctcttc attttctttg tattttcatg aagttattag 8460
attcacaggc caccataatg ccattgtctg tatatcttaa tttcaagata ttatttgagt 8520
aaattttgct tcctttgtat caagatagaa ctttgaaaag gtaggtaatt tcacagttga 8580
tcaaatattc tttgcccaaa ttacttttgg ttaaaatttc tcctaaatgt gctacagagt 8640
gcaaactctg tctccctgcc attccgctat atacttacta actattattt tattcaagat 8700
catgcatgct ctacttgaag gtctatttct atcttttcaa tgctaccctt acccactagc 8760
ctaatcacat tattcctatt ttcaacatct aggaatcaat tacatagtga acatgcctaa 8820
gaaataataa tctgggcaga tgcagtggct caggcccgta atcccagccc tttgagaggc 8880
cgagcgggtg gatcacttga ggtcaggcgt tggtcaagtg ctcctagaga accaggctga 8940
ccaacatgga gaaaccttgt ctctactaat aatacaaaaa ttagccaggt gaagtggcag 9000
gcacctataa tcccagctat tcgggaggct gaggaaggag aattggttga agcccggagg 9060
tggaggttgc agtgagccaa tattgcgcca ctgcattcca gacttggcaa cagagtgaca 9120
ctccatctca acaaaaagaa agaatgaaag aaagaaagag cgagattatg tctcaaaaaa 9180
aaggaaggaa ggaaggaagg aaggaaggaa ggaaagaagg acaatctcaa attctatttc 9240
attatttttc ttccacgctc ctagtccagc ctagggtgaa tgtttccccc tccaagaagg 9300
ggcccttgca gcaccacaac ctgcttgtct gccacgtgac ggatttctac ccaggcagca 9360
ttcaagtccg atggttcctg aatggacagg aggaaacagc tggggtcgtg tccaccaacc 9420
tgatccgtaa tggagactgg accttccaga tcctggtgat gctggaaatg accccccagc 9480
agggagatgt ctacacctgc caagtggagc acaccagcat ggatagtcct gtcaccgtgg 9540
agtggagtga gtctctgatg accctctaga ccccacctct gaagagcagg ggactctctg 9600
gctctggggt ccactcatct tatcttctgc atctataccc tggggccatg tccaaacccc 9660
atctttcttc tataccagct cctgagcata gtttgaagcc agggaaatgg agacttcctg 9720
accttggctt aggggttcct gaagattcat agttctcccc cttgtcagag aatctaggga 9780
cactgactgg tctcgaaacc ctcacactta ggaactgacc tcacacatag gaacagttct 9840
cttccttcag cattttagcc tcttctcagg cattttgaga ggcaacttcc agaatcagca 9900
tttgccacct tgttgaggtc acacccctgt tccagatatg agggtggctc tttctgaatt 9960
tcctcttagc aagctttttc cgctgcactg tcctcatccc gatatgctgc atcaggctcc 10020
agaatctcag acaggacatg agtagggatg cagctggtgg aggtgacact aaacctgggt 10080
ctgtccttcc cagaggcaca gtctgattct gcccggagta agacattgac gggagctggg 10140
ggcttcgtgc tggggctcat catctgtgga gtgggcatct tcatgcacag gaggagcaag 10200
aaaggtgaga aagcctgcag ggtgagcggg acttaccttc ccctggcata ttcacactta 10260
ttccacgatg aggggtttga cagaaaagaa atgtcagaaa gctctagagg ccactgatat 10320
cagataatcg gggaacaaac atgacctata gcgagagagg gatcccaggc tgggatctta 10380
atgcagccag atgcatgagg tcccaagtac tcaggctcct gcggagcgtc cattgagtga 10440
tgggcaatgg aatttggtgg gatggaaatg tttctctaat tatctgaggt ggtttcaatg 10500
gctgattata taacctttcg tctttcattt cagttcaacg aggatctgca taaacaggta 10560
atattcctgc tttgatttcc ttgtggggtg ggttgcagga ggatatgagt cctttctgtg 10620
cattgtaaca ctgaggctcc tccaggaagg gaatctcagg catgaacccc tctttcaatg 10680
tcagccttca ggcaagtggg gaaagagcat tgcttggctc cattgctgaa ggaagcagag 10740
atcaactctg ttatttatca gcctgagacg catcctctca ccataatttt tctctcctgg 10800
acttacagga aggaggctgg caacctggga taacttgtct tttaccccca cagggttcct 10860
gagctcactg aaaagactat tgtgccttag gaaaagcatt tgctgtgttt cgttagcatc 10920
tggctccagg acagaccttc aacttccaaa ttggatactg ctgccaagaa gttgctctga 10980
agtcagtttc tatcattctg ctctttgatt caaagcactg tttctctcac tgggcctcca 11040
accatgttcc cttcttctta gcaccacaaa taatcaaaac ccaacatgac tgtttgtttt 11100
cctttaaaaa tatgcaccaa atcatctctc atcacttttc tctgagggtt ttagtagaca 11160
gtaggagtta ataaagaagt tcattttggt ttaaacatag gaaagaagag aaccatgaaa 11220
atggggatat gttaactatt gtataatggg gcctgttaca catgacactc ttctgaattg 11280
actgtatttc agtgagctgc ccccaaatca agtttagtgc cctcatccat ttatgtctca 11340
gaccactatt cttaactatt caatggtgag cagactgcaa atctgcctga taggacccat 11400
attcccacag cactaattca acatatacct tactgagagc atgttttatc attaccatta 11460
agaagttaaa tgaacatcag aatttaaaat cataaatata atctaataca ctttaa 11516
//