Dbfetch
ID HLA01507; SV 3; standard; DNA; HUM; 2875 BP. XX AC HLA01507; XX SV HLA01507.3 XX DT 31-JUL-2001 (Rel. 1.12.0, Created, Version 1) DT 19-JAN-2018 (Rel. 3.31.0, Last Updated, Version 3) XX DE HLA-B*55:11, Human MHC Class I sequence XX KW Human MHC; HLA; Class I; HLA-B; Allele; HLA-B*55:11; XX OS Homo Sapiens (human) OC Eukaryota; Metazoa; Chordata; Vertebrata; Mammalia; Eutheria; Primates; OC Catarrhini; Hominidae; Homo. XX CC -------------------------------------------------------------------------- CC IPD-IMGT/HLA Release Version 3.57.0 CC -------------------------------------------------------------------------- CC Copyrighted by the IPD-IMGT/HLA Database, Distributed under the Creative CC Commons Attribution-NoDerivs License, see; CC http://www.ebi.ac.uk/ipd/imgt/hla/licence/ for further details. CC -------------------------------------------------------------------------- CC The sequence below is the official allele sequence as approved by the CC WHO Nomenclature Committee for Factors of the HLA System. CC Any cross references may differ from the sequence shown below. CC -------------------------------------------------------------------------- XX RN [1] RP 1-2875 RX PUBMED; 12956882. RA Steiner NK, Gans C, Baldassarre L, Bradshaw D, Rizzo M, Divekar S, Koester RA R, Ng J, Hartzman RJ, Hurley CK; RT "Twenty-five novel HLA-B alleles."; RL Tissue Antigens 62:263-266(2003). XX RN [2] RP 1-2875 RX PUBMED; 30107213. RA Voorter CEM, Matern B, Tran TH, Fink A, Vidan-Jeras B, Montanic S, Fischer RA G, Fae I, de Santis D, Whidborne R, Andreani M, Testi M, Groeneweg M, RA Tilanus MGJ; RT "Full-length extension of HLA allele sequences by HLA allele-specific RT hemizygous Sanger sequencing (SSBT)."; RL Human Immunology 79:763-772(2018). XX DR EMBL; AH010993; AH010993.2. DR EMBL; AY042674; AY042674.1. DR EMBL; AY042675; AY042675.1. DR EMBL; HG327117; HG327117.1. DR EMBL; LT618841; LT618841.1. XX FH Key Location/Qualifiers FH FT source 1..2875 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT /ethnic="European, Undefined" FT /cell_line="12762MT" FT /cell_line="2000-259-501" FT CDS join(131..203,332..601,847..1122,1698..1973,2078..2194, FT 2636..2668,2775..2818) FT /codon_start=1 FT /gene="HLA-B" FT /allele="HLA-B*55:11" FT /product="MHC Class I HLA-B*55:11 sequence" FT /translation="MRVTAPRTLLLLLWGALALTETWAGSHSMRYFYTAMSRPGRGEPR FT FIAVGYVDDTQFVRFDSDAASPREEPRAPWIEQEGPEYWDRNTQIYKAQAQTDRESLRN FT LRGYYNQSEAGSHTWQMMYGCDLGPDGRLLRGHNQLAYDGKDYIALNEDLSSWTAADTA FT AQITQRKWEAAREAEQLRAYLEGTCVEWLRRYLENGKETLQRADPPKTHVTHHPISDHE FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPKPLTLRWEPSSQSTIPIVGIVAGLAVLAVVVIGAVVATVMCRRKSSGGK FT GGSYSQAASSDSAQGSDVSLTA" FT UTR 1..130 FT exon 131..203 FT /number="1" FT intron 204..331 FT /number="1" FT exon 332..601 FT /number="2" FT intron 602..846 FT /number="2" FT exon 847..1122 FT /number="3" FT intron 1123..1697 FT /number="3" FT exon 1698..1973 FT /number="4" FT intron 1974..2077 FT /number="4" FT exon 2078..2194 FT /number="5" FT intron 2195..2635 FT /number="5" FT exon 2636..2668 FT /number="6" FT intron 2669..2774 FT /number="6" FT exon 2775..2818 FT /number="7" FT UTR 2819..2875 SQ Sequence 2875 BP; 533 A; 845 C; 925 G; 572 T; 0 other; tcgtgacgcg tccccatttc ccactcccat tgggtgtcgg gtgtctagag aagccaatca 60 gtgtcgccgg ggtcccagtt ctaaagtccc cacgcaccca cccggactca gagtctcctc 120 agacaccgag atgcgggtca cggcaccccg aaccctcctc ctgctgctct ggggggccct 180 ggccctgacc gagacctggg ccggtgagtg cgggtcggga gggaaatggc ctctgtgggg 240 aggagcgagg ggaccgcagg cgggggcgca ggacccgggg agccgcgccg ggaggagggt 300 ctggcgggtc tcagcccctc ctcgccccca ggctcccact ccatgaggta tttctacacc 360 gccatgtccc ggcccggccg cggggagccc cgcttcatcg cagtgggcta cgtggacgac 420 acgcagttcg tgaggttcga cagcgacgcc gcgagtccga gagaggagcc gcgggcgccg 480 tggatagagc aggaggggcc ggagtattgg gaccggaaca cacagatcta caaggcccag 540 gcacagactg accgagagag cctgcggaac ctgcgcggct actacaacca gagcgaggcc 600 ggtgagtgac cccggcccgg ggcgcaggtc acgactcccc atcccccacg tacggcccgg 660 gtcgccccga gtctccgggt ccgagatccg cctccctgag gccgcgggac ccgcccagac 720 cctcgaccgg cgagagcccc aggcgcgttt acccggtttc attttcagtt gaggccaaaa 780 tccccgcggg ttggtcgggg cggggcgggg ctcgggggac ggggctgacc gcggggccgg 840 ggccagggtc tcacacttgg cagatgatgt atggctgcga cctggggccg gacgggcgcc 900 tcctccgcgg gcataaccag ttagcctacg acggcaagga ttacatcgcc ctgaacgagg 960 acctgagctc ctggaccgcg gcggacaccg cggctcagat cacccagcgc aagtgggagg 1020 cggcccgtga ggcggagcag ctgagagcct acctggaggg cacgtgcgtg gagtggctcc 1080 gcagatacct ggagaacggg aaggagacgc tgcagcgcgc gggtaccagg ggcagtgggg 1140 agccttcccc atctcctata ggtcgccggg gatggcctcc cacgagaaga ggaggaaaat 1200 gggatcagcg ctagaatgtc gccctccctt gaatggagaa tggcatgagt tttcctgagt 1260 ttcctctgag ggccccctct tctctctagg acaattaagg gatgacgtct ctgaggaaat 1320 ggaggggaag acagtcccta gaatactgat caggggtcct ctttgacccc tgcagcagcc 1380 ttgggaaccg tgacttttcc tctcaggcct tgttctctgc ctcacactca gtgtgtttgg 1440 ggctctgatt ccagcacttc tgagtcactt tacctccact cagatcagga gcagaagtcc 1500 ctgttccccg ctcagagact cgaactttcc aatgaatagg agattatccc aggtgcctgc 1560 gtccaggctg gtgtctgggt tctgtgcccc ttccccaccc caggtgtcct gtccattctc 1620 aggctggtca catgggtggt cctagggtgt cctatgagag atgcaaagcg cctgaatttt 1680 ctgactcttc ccatcagacc ccccaaagac acacgtgacc caccacccca tctctgacca 1740 tgaggccacc ctgaggtgct gggccctggg cttctaccct gcggagatca cactgacctg 1800 gcagcgggat ggcgaggacc aaactcagga cactgagctt gtggagacca gaccagcagg 1860 agatagaacc ttccagaagt gggcagctgt ggtggtgcct tctggagaag agcagagata 1920 cacatgccat gtacagcatg aggggctgcc gaagcccctc accctgagat ggggtaagga 1980 gggggatgag gggtcatatc tcttctcagg gaaagcagga gcccttctgg agcccttcag 2040 cagggtcagg gcccctcgtc ttcccctcct ttcccagagc catcttccca gtccaccatc 2100 cccatcgtgg gcattgttgc tggcctggct gtcctagcag ttgtggtcat cggagctgtg 2160 gtcgctactg tgatgtgtag gaggaagagc tcaggtaggg aaggggtgag gggtggggtc 2220 tgggttttct tgtcccactg ggggtttcaa gccccaggta gaagtgttcc ctgcctcatt 2280 actgggaagc agcatccaca caggggctaa tgcagcctgg gaccctgtgt gccagcactt 2340 actcttttgt gcagcacatg tgacaatgaa ggacggatgt atcaccttga tggttgtggt 2400 gttggggtcc tgatttcagc attcatgagt caggggaagg tccctgctaa ggacagacct 2460 taggagggca gttggtccag gacccacact tgctttcctc gtgtttcctg atcctgcctt 2520 gggtctgtag tcatacttct ggaaattcct tttgggtcca agacgaggag gttcctctaa 2580 gatctcatgg ccctgcttcc tcccagtccc ctcacaggac attttcttcc cacaggtgga 2640 aaaggaggga gctactctca ggctgcgtgt aagtggtggg ggtgggagtg tggaggagct 2700 cacccacccc ataattcctc ctgtcccacg tctcctgcgg gctctgacca ggtcctgttt 2760 ttgttctact ccagccagcg acagtgccca gggctctgat gtgtctctca cagcttgaaa 2820 aggtgagatt cttggggtct agagtgggcg ggggggggtg gggtggggag ggggc 2875 //