Dbfetch

Dbfetch

ID   PP273442; SV 1; linear; genomic DNA; STD; HUM; 1753 BP.
XX
AC   PP273442;
XX
DT   15-FEB-2024 (Rel. 144, Created)
DT   23-FEB-2024 (Rel. 144, Last updated, Version 1)
XX
DE   Homo sapiens MHC class I antigen (HLA-B) gene, HLA-B*35extended allele,
DE   exons 1 through 3 and partial cds.
XX
KW   .
XX
OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
XX
RN   [1]
RP   1-1753
RA   Vinod P.I.M., Kour M., Sharma A.;
RT   ;
RL   Submitted (03-FEB-2024) to the INSDC.
RL   Histocompatibility, MedGenome Labs Ltd, 3rd Floor, Narayana Netralaya
RL   Building, Narayana Health City, # 258/A, Bommasandra, Hosur Rd, Bangalore,
RL   Karnataka 560 100, India
XX
DR   MD5; 532834faf16255cfcded17fd40168534.
XX
CC   ##Assembly-Data-START##
CC   Assembly Method       :: NGSEngine v. 2.30
CC   Assembly Name         :: HLA B*
CC   Coverage              :: Full coverage
CC   Sequencing Technology :: Illumina
CC   ##Assembly-Data-END##
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1753
FT                   /organism="Homo sapiens"
FT                   /mol_type="genomic DNA"
FT                   /country="India"
FT                   /sex="male"
FT                   /tissue_type="whole blood"
FT                   /db_xref="taxon:9606"
FT   gene            <1..>1753
FT                   /gene="HLA-B"
FT                   /allele="HLA-B*35extended"
FT   mRNA            join(<1..357,487..756,1002..>1277)
FT                   /gene="HLA-B"
FT                   /allele="HLA-B*35extended"
FT                   /product="MHC class I antigen"
FT   exon            <1..357
FT                   /gene="HLA-B"
FT                   /allele="HLA-B*35extended"
FT                   /number=1
FT   5'UTR           <1..284
FT                   /gene="HLA-B"
FT                   /allele="HLA-B*35extended"
FT   CDS             join(285..357,487..756,1002..>1277)
FT                   /codon_start=1
FT                   /gene="HLA-B"
FT                   /allele="HLA-B*35extended"
FT                   /product="MHC class I antigen"
FT                   /protein_id="WVS81797.1"
FT                   /translation="MRVTAPRTVLLLLWGAVALTETWAGSHSMRYFYTAMSRPGRGEPR
FT                   FIAVGYVDDTQFVRFDSDAASPRTEPRAPWIEQEGPEYWDRNTQIFKTNTQTYRESLRN
FT                   LRGYYNQSEAGSHTWQTMYGCDLGPDGRLLRGHDQFAYDGKDYIALNEDLSSWTAADTA
FT                   AQITQRKWEAARVAEQLRAYLEGLCVEWLRRYLENGKETLQRA"
FT   exon            487..756
FT                   /gene="HLA-B"
FT                   /allele="HLA-B*35extended"
FT                   /number=2
FT   exon            1002..1277
FT                   /gene="HLA-B"
FT                   /allele="HLA-B*35extended"
FT                   /number=3
XX
SQ   Sequence 1753 BP; 313 A; 559 C; 572 G; 309 T; 0 other;
     gatcaggacg aagtcccagg ccccgggcgg ggctctcagg gtctcaggct ccgagagcct        60
     tgtctgcatt ggggaggcgc agcgttgggg attccccact cccacgagtt tcacttcttc       120
     tcccaaccta tgtcgggtcc ttcttccagg atactcgtga cgcgtcccca tttcccactc       180
     ccattgggtg tcggatatct agagaagcca atcagtgtcg ccggggtccc agttctaaag       240
     tccccacgca cccacccgga ctcagaatct cctcagacgc cgagatgcgg gtcacggcgc       300
     cccgaaccgt cctcctgctg ctctgggggg cagtggccct gaccgagacc tgggccggtg       360
     agtgcggggt cgggagggaa atggcctctg tggggaggag cgaggggacc gcaggcgggg       420
     gcgcaggacc tgaggagccg cgccgggagg agggtcgggc gggtctcagc ccctcctcgc       480
     ccccaggctc ccactccatg aggtatttct acaccgccat gtcccggccc ggccgcgggg       540
     agccccgctt catcgcagtg ggctacgtgg acgacaccca gttcgtgagg ttcgacagcg       600
     acgccgcgag tccgaggacg gagccccggg cgccatggat agagcaggag gggccggagt       660
     attgggaccg gaacacacag atcttcaaga ccaacacaca gacttaccga gagagcctgc       720
     ggaacctgcg cggctactac aaccagagcg aggccggtga gtgaccccgg cccggggcgc       780
     aggtcacgac tccccatccc ccacgtacgg cccgggtcgc cccgagtctc cgggtccgag       840
     atccgcctcc ctgaggccgc gggacccgcc cagaccctcg accggcgaga gccccaggcg       900
     cgtttacccg gtttcatttt cagttgaggc caaaatcccc gcgggttggt cggggcgggg       960
     cggggctcgg gggacggggc tgaccgcggg gccggggcca gggtctcaca cttggcagac      1020
     gatgtatggc tgcgacctgg ggcccgacgg gcgcctcctc cgcgggcatg accagttcgc      1080
     ctacgacggc aaggattaca tcgccctgaa cgaggacctg agctcctgga ccgcggcgga      1140
     caccgcggct cagatcaccc agcgcaagtg ggaggcggcc cgtgtggcgg agcagctgag      1200
     agcctacctg gagggcctgt gcgtggagtg gctccgcaga tacctggaga acgggaagga      1260
     gacgctgcag cgcgcgggta ccaggggcag tggggagcct tccccatctc ctataggtcg      1320
     ccggggatgg cctcccacga gaagaggagg aaaatgggat cagcgctaga atgtcgccct      1380
     cccttgaatg gagaatggca tgagttttcc tgagtttcct ctgagggccc cctcttctct      1440
     ctaggacaat taagggatga cgtctctgag gaaatggagg ggaagacagt ccctagaata      1500
     ctgatcaggg gtcccctttg acccctgcag cagccttggg aaccgtgact tttcctctca      1560
     ggccttgttc tctgcctcac actcagtgtg tttggggctc tgattccagc acttctgagt      1620
     cactttacct ccactcagat caggagcaga agtccctgtt ccccgctcag agactcgaac      1680
     tttccaatga ataggagatt atcccaggtg cctgcgtcca ggctggtgtc tgggttctgt      1740
     gccccttccc cac                                                         1753
//