Dbfetch
ID OY497119; SV 1; linear; genomic DNA; STD; HUM; 5355 BP. XX AC OY497119; XX PR Project:PRJEB64519; XX DT 26-JUL-2023 (Rel. 144, Created) DT 27-JUL-2023 (Rel. 144, Last updated, Version 1) XX DE Homo sapiens HLA-C gene for MHC class I antigen, allele HLA-C*04:01:01:79 XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RA Lucas J., Lucas AM J.; RT ; RL Submitted (25-JUL-2023) to the INSDC. RL ANTHONY NOLAN RESEARCH INSTITUTE, 77C Fleet Road, London, NW3 2QU, United RL Kingdom XX DR MD5; e2397d141db7c43efb87be5a320d8b98. XX FH Key Location/Qualifiers FH FT source 1..5355 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="AN302850" FT /db_xref="taxon:9606" FT CDS join(677..749,880..1149,1396..1671,2259..2534,2656..2775, FT 3215..3247,3355..3402,3567..3571) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-C" FT /allele="HLA-C*04:01:01:79" FT /product="MHC class I antigen" FT /function="antigen presenting molecule" FT /protein_id="CAJ0990465.1" FT /translation="MRVMAPRTLILLLSGALALTETWAGSHSMRYFSTSVSWPGRGEPR FT FIAVGYVDDTQFVRFDSDAASPRGEPREPWVEQEGPEYWDRETQKYKRQAQADRVNLRK FT LRGYYNQSEDGSHTLQRMFGCDLGPDGRLLRGYNQFAYDGKDYIALNEDLRSWTAADTA FT AQITQRKWEAAREAEQRRAYLEGTCVEWLRRYLENGKETLQRAEHPKTHVTHHPVSDHE FT ATLRCWALGFYPAEITLTWQWDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPEPLTLRWKPSSQPTIPIVGIVAGLAVLAVLAVLGAMVAVVMCRRKSSGG FT KGGSCSQAASSNSAQGSDESLIACKA" FT exon 677..749 FT /gene="HLA-C" FT /allele="HLA-C*04:01:01:79" FT /number=1 FT intron 750..879 FT /gene="HLA-C" FT /allele="HLA-C*04:01:01:79" FT /number=1 FT exon 880..1149 FT /gene="HLA-C" FT /allele="HLA-C*04:01:01:79" FT /number=2 FT intron 1150..1395 FT /gene="HLA-C" FT /allele="HLA-C*04:01:01:79" FT /number=2 FT exon 1396..1671 FT /gene="HLA-C" FT /allele="HLA-C*04:01:01:79" FT /number=3 FT intron 1672..2258 FT /gene="HLA-C" FT /allele="HLA-C*04:01:01:79" FT /number=3 FT exon 2259..2534 FT /gene="HLA-C" FT /allele="HLA-C*04:01:01:79" FT /number=4 FT intron 2535..2655 FT /gene="HLA-C" FT /allele="HLA-C*04:01:01:79" FT /number=4 FT exon 2656..2775 FT /gene="HLA-C" FT /allele="HLA-C*04:01:01:79" FT /number=5 FT intron 2776..3214 FT /gene="HLA-C" FT /allele="HLA-C*04:01:01:79" FT /number=5 FT exon 3215..3247 FT /gene="HLA-C" FT /allele="HLA-C*04:01:01:79" FT /number=6 FT intron 3248..3354 FT /gene="HLA-C" FT /allele="HLA-C*04:01:01:79" FT /number=6 FT exon 3355..3402 FT /gene="HLA-C" FT /allele="HLA-C*04:01:01:79" FT /number=7 FT intron 3403..3566 FT /gene="HLA-C" FT /allele="HLA-C*04:01:01:79" FT /number=7 FT exon 3567..3571 FT /gene="HLA-C" FT /allele="HLA-C*04:01:01:79" FT /number=8 XX SQ Sequence 5355 BP; 1134 A; 1386 C; 1637 G; 1198 T; 0 other; aaaaaggaaa ctggtctcta tgagaatctc tacctggtgc tttcagacaa aacttcacca 60 ggtttaaaga gaaaactcct gactctacac gtccattccc agggcgagct cactgtctgg 120 catcaagttc cccatggtga gtttccctgt acaagagtcc aaggggagag gtaagtgtcc 180 tttattttgc tggatgtagt ttaatattac ctgaggtaag gtaaggcaaa gagtgggagg 240 cagggagtcc agttcaggga cggggattcc aggagaagtg aaggggaagg ggctgggcgc 300 agcctggggg tctctccctg gtttccacag acagatcctt ggccaggact caggcacaca 360 gtgtgacaaa gatgcttggt gtaggagaag aggaatcagg acgaagtccc aggtcccggg 420 cggggctctc agggtctcag gctccaaggg ccgtgtctgc actggggagg cgccgcgttg 480 gggattctcc actcccctga gtttcacttc ttctcccaac ctgcgtcggg tccttcttcc 540 tgaatactca tgacgcgtcc ccaattccca ctcccattgg gtgtcgggtt ctagagaagc 600 caatcagcgt ctccgcagtc ccggttctaa agtccccagt cacccacccg gactcagatt 660 ctccccagac gccgagatgc gggtcatggc gccccgaacc ctcatcctgc tgctctcggg 720 agccctggcc ctgaccgaga cctgggccgg tgagtgcggg gttgggaggg aaacggcctc 780 tggggagagg agcgaggggc ccgcccggcg agggcgcagg acccggggag ccgcgcaggg 840 aggagggtcg ggcgggtctc agccactcct cgtccccagg ctcccactcc atgaggtatt 900 tctccacatc cgtgtcctgg cccggccgcg gggagccccg cttcatcgca gtgggctacg 960 tggacgacac gcagttcgtg cggttcgaca gcgacgccgc gagtccaaga ggggagccgc 1020 gggagccgtg ggtggagcag gaggggccgg agtattggga ccgggagaca cagaagtaca 1080 agcgccaggc acaggctgac cgagtgaacc tgcggaaact gcgcggctac tacaaccaga 1140 gcgaggacgg tgagtgaccc cggcccgggg cgcaggtcac gacccctccc catcccccac 1200 ggacggcccg ggtcgccccg agtctccccg tctgagatcc accccgaggc tgcggaaccc 1260 gcccagaccc tcgaccggag agagccccag tcacctttac ccggtttcat tttcagttta 1320 ggccaaaatc cccgcgggtt ggtcgggact ggggcggggc tcgggggacc gggctgacca 1380 cgggggcggg gccagggtct cacaccctcc agaggatgtt tggctgcgac ctggggccgg 1440 acgggcgcct cctccgcggg tataaccagt tcgcctacga cggcaaggat tacatcgccc 1500 tgaacgagga tctgcgctcc tggaccgccg cggacacggc ggctcagatc acccagcgca 1560 agtgggaggc ggcccgtgag gcggagcagc ggagagccta cctggagggc acgtgcgtgg 1620 agtggctccg cagatacctg gagaacggga aggagacgct gcagcgcgcg ggtaccaggg 1680 gcagtgggga gccttcccca tctcccgtag atctcccggg atggcctccc acgaggaggg 1740 gaggaaaatg ggatcagcgc tagaatatcg ccctcccttg aatggagaat gggatgagtt 1800 ttcctgagtt tcctctgagg gccccctctg ctctctagga caattaaggg atgaagtcct 1860 tgaggaaatg gaggggaaga cagtccctgg aatactgatc aggggtcccc tttgaccact 1920 ttgaccactg cagcagctgt ggtcaggctg ctgacctttc tctcaggcct tgttctctgc 1980 ctgacgctca atgtgtttga aggtttgatt ccagcttttc tgagtccttc ggcctccact 2040 caggtcagga ccagaagtcg ctgttcctcc ctcagagact agaactttcc aatgaatagg 2100 agattatccc aggtgcctgt gtccaggctg gcgtctgggt tctgtgcccc cttccccacc 2160 ccaggtgtcc tgtccattct caggatggtc acatgggcgc tgttggagtg tcgcaagaga 2220 gatacaaagt gtctgaattt tctgactctt cccatcagaa cacccaaaga cacacgtgac 2280 ccaccatccc gtctctgacc atgaggccac cctgaggtgc tgggccctgg gcttctaccc 2340 tgcggagatc acactgacct ggcagtggga tggggaggac caaactcagg acaccgagct 2400 tgtggagacc aggccagcag gagatggaac cttccagaag tgggcagctg tggtggtgcc 2460 ttctggagaa gagcagagat acacgtgcca tgttcagcac gaggggctgc cggagcccct 2520 caccctgaga tggagtaagg agggggatga ggggtgatgt gtcttctcag ggaaagcaga 2580 agtcctggag cccttcagcc gggtcagggc tgaggcttgg aggtcagggc ccctcacctt 2640 cccctccttt cccagagccg tcttcccagc ccaccatccc catcgtgggc atcgttgctg 2700 gcctggctgt cctggctgtc ctagctgtcc taggagctat ggtggctgtt gtgatgtgta 2760 ggaggaagag ctcaggtagg gaaggggtga ggagtggggt ctgggttttc ttgttccact 2820 gggagtttca agccccaggt agaagtgtgc cccacctcgt tactggaagc accatccaca 2880 catgggccat cccagcctgg gaccctgtgt gccagcactt actctgttgt gaagcacatg 2940 acaatgaagg acagatgtat caccttgatg attatggtgt tggggtcctt gattccagca 3000 ttcatgagtc aggggaaggt ccctgctaag gacagacctt aggagggcag ttgcttcaga 3060 acccacagct gctttccccg tgtttcctga tcctgccctg ggtctgcagt catagttctg 3120 gaaacttctc ttgggtccaa gactaggagg ttcccctaag atcgcatggc cctgcctcct 3180 ccctgtcccc tcacagggca ttttcttccc acaggtggaa aaggagggag ctgctctcag 3240 gctgcgtgta agtgatggcg gtgggcgtgt ggaggagctc acccacccca taattcctct 3300 tgtcccacat ctcctgcggg ctctgaccag gtcttttttt ttgttctacc ccagccagca 3360 acagtgccca gggctctgat gagtctctca tcgcttgtaa aggtgagatt ctggggagct 3420 gaagtggtcg ggggtggggc agagggaaaa ggcctaggta atggggatcc tttgattggg 3480 acgtttcgaa tgtgtggtga gctgttcaga gtgtcatcac ttaccatgac tgacctgaat 3540 ttgttcatga ctattgtgtt ctgtagcctg agacagctgc ctgtgtggga ctgagatgca 3600 ggatttcttc acacctctcc tttgtgactt caagagcctc tggcatctct ttctgcaaag 3660 gcatctgaat gtgtctgcgt tcctgttagc ataatgtgag gaggtggaga gacagcccac 3720 ccccgtgtcc accgtgaccc ctgtccccac actgacctgt gttccctccc cgatcatctt 3780 tcctgttcca gagaagtggg ctggatgtct ccatctctgt ctcaacttca tggtgcgctg 3840 agctgcaact tcttacttcc ctaatgaagt taagaacctg aatataaatt tgttttctca 3900 aatatttgct atgaagggtt gatggattaa ttaaataagt caattcctgg aagttgagag 3960 agcaaataaa gacctgagaa ccttccagaa tccgcatgtt cgctgtgctg agtctgttgc 4020 aggtgggggt ggggaaggct gtgaggagcc gagtgtggac ggggcctgtg cctagttgct 4080 gttcagttct tcatgggctt tatgtggtca gtcctcagct gggtcacctt cactgctcca 4140 ttgtccttgt cccttcagtg gaaacttgtc cagcgggagc tgtgaccaca gaggctcaca 4200 catcgcccag ggcagcccct gcacacggga gtccctgtgc tttctgagac aaattttcag 4260 acccattcag ctcctgccct ccttctaggg ctcctcttct gctttggtct cctgccctct 4320 ctcccttccc tgattccagt gatcttcgtg ctgactccaa tcccaactca tgaatctaaa 4380 gcagagccta atttagattt atatttgttt gtaaaattgg gtccatagtc tagaattgtt 4440 ccttcctgaa gagagaaacc tgatcgtgtg ctgcagtgtg cagggcggtt ggtgtgggag 4500 gagggatagg ggagggagga cacacaagca gccctgctga gaaaagtaca ggcggcctcg 4560 gtgtcagtgt gaggggacct tgtgctgcag ctgccacaaa acagcacttg gcctgaggct 4620 atgttaataa agatactggc tttagaatag gaggtgctct acactgatca ttcaactgac 4680 ctttgttgtc agccagacac aggacagaaa agttctgcat ctggggaaca ccattgaagt 4740 gaaatcagaa aaatatctga gcatatgctc cagtggtaag aggcagacga tacatacact 4800 ataaccacag taagaaaaga aagtgatgga aggtggtaag tgccatgagg caggtgatcc 4860 gggtatgggc agtggggaca gggaaggtgg ctgttggaca ggagttgtca atgtgtgcct 4920 tgttgcaaag atgacctttg aggaaagatt tgagggacat gaggatgtct ggggaagttc 4980 tttctaggca aggaaactcc agtccaaatg cactagggca ggaaggtgtc tgtgttccca 5040 gaagagcaag gaggccagga gggctggaca gagaaactag atgaggtcag aggtatggcc 5100 agagcaggtg ggcttgaggg gagtggggtt gcgtctgacc tctgctctga gtgggatggg 5160 gagttagagg acagttttga gcagaagaga gccatgatat gacttctttc ttaaaaggat 5220 ctctgatggc tgtgctgaga acagaattga gaggtgaggg atgagggagg cagaagggaa 5280 aacagtagga atcgagtgca gtattccagg ctggagatat cggtttcctt gactggggtg 5340 tgagcacagg aaata 5355 //