Dbfetch
ID OY496858; SV 1; linear; genomic DNA; STD; HUM; 5347 BP. XX AC OY496858; XX PR Project:PRJEB64519; XX DT 26-JUL-2023 (Rel. 144, Created) DT 27-JUL-2023 (Rel. 144, Last updated, Version 1) XX DE Homo sapiens HLA-C gene for MHC class I antigen, allele HLA-C*02:02:02:NEW XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RA Lucas J., Lucas AM J.; RT ; RL Submitted (25-JUL-2023) to the INSDC. RL ANTHONY NOLAN RESEARCH INSTITUTE, 77C Fleet Road, London, NW3 2QU, United RL Kingdom XX DR MD5; db0fc3738678d0d6fe48a812ae996753. XX FH Key Location/Qualifiers FH FT source 1..5347 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="AN302617" FT /db_xref="taxon:9606" FT CDS join(677..749,880..1149,1395..1670,2258..2533,2655..2774, FT 3214..3246,3354..3401,3565..3569) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-C" FT /allele="HLA-C*02:02:02:NEW" FT /product="MHC class I antigen" FT /function="antigen presenting molecule" FT /protein_id="CAJ0990204.1" FT /translation="MRVMAPRTLLLLLSGALALTETWACSHSMRYFYTAVSRPSRGEPH FT FIAVGYVDDTQFVRFDSDAASPRGEPRAPWVEQEGPEYWDRETQKYKRQAQTDRVNLRK FT LRGYYNQSEAGSHTLQRMYGCDLGPDGRLLRGYDQSAYDGKDYIALNEDLRSWTAADTA FT AQITQRKWEAAREAEQWRAYLEGECVEWLRRYLENGKETLQRAEHPKTHVTHHPVSDHE FT ATLRCWALGFYPTEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPEPLTLRWEPSSQPTIPIVGIVAGLAVLAVLAVLGAVVAVVMCRRKSSGG FT KGGSCSQAASSNSAQGSDESLIACKA" FT exon 677..749 FT /gene="HLA-C" FT /allele="HLA-C*02:02:02:NEW" FT /number=1 FT intron 750..879 FT /gene="HLA-C" FT /allele="HLA-C*02:02:02:NEW" FT /number=1 FT exon 880..1149 FT /gene="HLA-C" FT /allele="HLA-C*02:02:02:NEW" FT /number=2 FT intron 1150..1394 FT /gene="HLA-C" FT /allele="HLA-C*02:02:02:NEW" FT /number=2 FT exon 1395..1670 FT /gene="HLA-C" FT /allele="HLA-C*02:02:02:NEW" FT /number=3 FT intron 1671..2257 FT /gene="HLA-C" FT /allele="HLA-C*02:02:02:NEW" FT /number=3 FT exon 2258..2533 FT /gene="HLA-C" FT /allele="HLA-C*02:02:02:NEW" FT /number=4 FT intron 2534..2654 FT /gene="HLA-C" FT /allele="HLA-C*02:02:02:NEW" FT /number=4 FT exon 2655..2774 FT /gene="HLA-C" FT /allele="HLA-C*02:02:02:NEW" FT /number=5 FT intron 2775..3213 FT /gene="HLA-C" FT /allele="HLA-C*02:02:02:NEW" FT /number=5 FT exon 3214..3246 FT /gene="HLA-C" FT /allele="HLA-C*02:02:02:NEW" FT /number=6 FT intron 3247..3353 FT /gene="HLA-C" FT /allele="HLA-C*02:02:02:NEW" FT /number=6 FT exon 3354..3401 FT /gene="HLA-C" FT /allele="HLA-C*02:02:02:NEW" FT /number=7 FT intron 3402..3564 FT /gene="HLA-C" FT /allele="HLA-C*02:02:02:NEW" FT /number=7 FT exon 3565..3569 FT /gene="HLA-C" FT /allele="HLA-C*02:02:02:NEW" FT /number=8 XX SQ Sequence 5347 BP; 1138 A; 1389 C; 1629 G; 1191 T; 0 other; aaaaaggaaa ctggtctcta tgagaatctc tacctggtgc tttcagacaa aacttcacca 60 ggtttaaaga gaaaactcct gactctacac gtccattccc agggcgagct cactgtctgg 120 catcaagttc cccatggtga gtttccctgt acaagagtcc aaggggagag gtaagtgtcc 180 tttattttgc tggatgtagt ttaatattac ctgaggtaag gtaaggcaaa gagtgggagg 240 cagggagtcc agttcaggga cggggattcc aggagaagtg aaggggaagg ggctgggcgc 300 agcctggggg tctctccctg gtttccacag acagatcctt ggccaggact caggcacaca 360 gtgtgacaaa gatgcttggt gtaggagaag agggatcagg acgaagtccc aggtcccggg 420 cggggctctc agggtctcag gctccaaggg ccgtgtctgc actggggagg cgccgcgttg 480 aggattctcc actcccctga gtttcacttc ttctcccaac ctgcgacggg tccttcttcc 540 tgaatactca tgacgcgtcc ccaattccca ctcccattgg gtgtcgggtt ctagagaagc 600 caatcagcgt ctccgcagtc ccggttctaa agtccccagt cacccacccg gactcggatt 660 ctccccagac gccgagatgc gggtcatggc gccccgaacc ctcctcctgc tgctctcggg 720 agccctggcc ctgaccgaga cctgggcctg tgagtgcggg gttgggaggg aaacggcctc 780 tgcggagagg agcgaggggc ccgcccggcg agggcgcagg acccggggag ccgcgcaggg 840 aggagggtcg ggcgggtctc agcccctcct ctcccccagg ctcccactcc atgaggtatt 900 tctacaccgc tgtgtcccgg cccagccgcg gagagcccca cttcatcgca gtgggctacg 960 tggacgacac gcagttcgtg cggttcgaca gcgacgccgc gagtccaaga ggggagccgc 1020 gggcgccgtg ggtggagcag gaggggccgg agtattggga ccgggagaca cagaagtaca 1080 agcgccaggc acagactgac cgagtgaacc tgcggaaact gcgcggctac tacaaccaga 1140 gcgaggccgg tgagtgaccc cggcccgggg cgcaggtcac gacccctccc catcccccac 1200 ggacggcccg ggtcgccccg agtctccggg tctgagatcc accccgaggc tgcggaaccc 1260 gcccagaccc tcgaccggag agagccccag tcacctttac ccggtttcat tttcagttta 1320 ggccaaaatc cccgcgggtt ggtcggggct ggggcggggc tcgggggacg ggctgaccac 1380 gggggcgggg ccagggtctc acaccctcca gaggatgtac ggctgcgacc tggggcccga 1440 cgggcgcctc ctccgcgggt atgaccagtc cgcctacgac ggcaaggatt acatcgccct 1500 gaacgaggac ctgcgctcct ggaccgccgc ggacacagcg gctcagatca cccagcgcaa 1560 gtgggaggcg gcccgtgagg cggagcagtg gagagcctac ctggagggcg agtgcgtgga 1620 gtggctccgc agatacctgg agaacgggaa ggagacgctg cagcgcgcgg gtaccagggg 1680 cagtggggag ccttccccat ctcctgtaga tctcccggga tggcctccca cgaggagggg 1740 aggaaaatgg gatcagcgct agaatatcgc cctcccttga atggagaatg ggatgagttt 1800 tcctgagttt cctctgaggg ccccctctgc tctctaggac aattaaggga tgaagtcctt 1860 gaggaaatgg aggggaagac agtccctgga atactgatca ggggtcccct ttgaccactt 1920 tgaccactgc agcagctgtg gtcaggctgc tgacctttct ctcaggcctt gttctctgcc 1980 tcacgctcaa tgtgtttgaa ggtttgattc cagcttttct gagtccttcg gcctccactc 2040 aggtcaggac cagaagtcgc tgttcctccc tcagagacta gaactttcca atgaatagga 2100 gattatccca ggtgcctgtg tccaggctgg cgtctgggtt ctgtgccccc ttccccaccc 2160 caggtgtcct gtccattctc aggatagtca catgggcgct gttggagtgt cgcaagagag 2220 atacaaagtg tctgaatttt ctgactcttc ccgtcagaac acccaaagac acacgtgacc 2280 caccatcccg tctctgacca tgaggccacc ctgaggtgct gggccctggg cttctaccct 2340 acggagatca cactgacctg gcagcgggat ggcgaggacc aaactcagga caccgagctt 2400 gtggagacca ggccagcagg agatggaacc ttccagaagt gggcagctgt ggtggtgcct 2460 tctggagaag agcagagata cacgtgccat gtgcagcacg aggggctgcc ggagcccctc 2520 accctgagat ggggtaagga gggggatgag gggtcatgtg tcttctcagg gaaagcagaa 2580 gtcctggagc ccttcagctg ggtcagggct gaggcttggg ggtcagggcc cctcaccttc 2640 ccctcctttc ccagagccat cttcccagcc caccatcccc atcgtgggca tcgttgctgg 2700 cctggctgtc ctggctgtcc tagctgtcct aggagctgtg gtggctgttg tgatgtgtag 2760 gaggaagagc tcaggtaggg aaggggtgag gagtggggtc tgggttttct tgtcccactg 2820 ggagtttcaa gccccaggta gaagtgtgcc ccacctcgtt actggaagca ccatccacac 2880 atgggccatc ccagcctggg accctgtgtg ccagcactta ctctgttgtg aagcacatga 2940 caatgaagga cagatgtatc accttgatga ttatggtgtt ggggtccttg attccagcat 3000 tcatgagtca ggggaaggtc cctgctaagg acagacctta ggagggcagt tgctccagaa 3060 cccacagctg ctttccccgt gtttcctgat cctgccctgg gtctgcagtc atagttctgg 3120 aaacttctct tgggtccaag actaggaggt tcccctaaga ttgcatggcc ctgcctcctc 3180 cctgtcccct cacagggcat tttcttccca caggtggaaa aggagggagc tgctctcagg 3240 ctgcgtgtaa gtgatggcgg caggcgtgtg gaggagctca cccaccccat aattcctctt 3300 gtcccacatc tcctgcgggc tctgaccagg tctttttttt tgttctaccc cagccagcaa 3360 cagtgcccag ggctctgatg agtctctcat cgcttgtaaa ggtgagattc tgggagctga 3420 agtggtcggg ggtggggcag agggaaaagg cctaggtaat ggggatcctt tgatagggac 3480 gtttcgaatg tgtggtgagc tgttcagagt gtcatcactt accatgactg acctgaattt 3540 gttcatgact attgtgttct gtagcctgag acagctgcct gtgtgggact gagatgcagg 3600 atttcttcac acctctcctt tgtgacttca agagcctctg gcatctcttt ctacaaaggc 3660 atctgaatgt gtctgcgttc ctgttagcat aatgtgagga ggtggagaga cagcccaccc 3720 ccgtgtccac cgtgacccct gtccccacac tgacctgtgt tccctccccg atcatctttc 3780 ctgttccaga gaagtgggct ggatgtctcc atctctgtct caactttacg tgtactgagc 3840 tgcaacttct tccctactga aaataagaat ctgaatataa atttgttttc tcaaatattt 3900 gctatgagag gttgatggat taattaaata agtcaattcc tggaagttga gagagcaaat 3960 aaagacctga gaaccttcca gaatccgcat gttcgctgtg ctgagtctgt tgcaggtggg 4020 ggtggggaag gctgtgagga gacgagtgtg gacggggcct gtgcctagtt gctgttcagt 4080 tcttcatggg ctttatgtgg tcagtcctca gctgggtcac cttcactgct ccattgtcct 4140 tgtcccttca gtggaaactt gtccagcggg agctgtgacc acagaggctc acacatcgcc 4200 cagggcagcc cctgcacacg ggagtccctg tgctttctga gacaaatttt cagacccatt 4260 cagctcctgc cctccttcta gggctcctct tctgctttgg tctcctgccc tctctccctt 4320 ccctgattcc agtaatcttc gtgctgactc caatcccaac tcatgaatct aaagcagagc 4380 ctaatttaga tttatatttg tttgtaaaat tgggtccata gtctagaatt gttccttcct 4440 gaagagagaa acctgattgt gtgctgcagt gtgtggggcg gttggtgtgg gaggagggat 4500 aggggaggga ggacacacaa gcagccctgc tgagaaaagt acaggcggcc tcggtgtcag 4560 tgtgagggga ccttgtgctg cagctgccac aaaacagcac ttggcctgag gctatgttaa 4620 taaagatact ggctttagag taggaggtgc tctacactga tcattcaact gacctttgtt 4680 gtcagccaga cacaggacag aaaagttctg catctgggga acaccattga agtaaaatca 4740 gaaaaatatc tgagcatatg cttcagtggt aagaggcaga cgatacatac actataacca 4800 cagtaagaaa agaaagtgat ggaaggtggt aagtgccatg aggcaggtga tccgggtatg 4860 ggcagtgggg acagggaagg tggctgttgg acaggagttg tcaatgtgtg ccttgttgca 4920 aagatgacct ttgaggaaag atttgaggga catgaggatg tctggggaag ttctttctag 4980 gcaaggaaac tccagtccaa atgtactagg gcaggaaggt gtctgtgttc ccagaagagc 5040 aaggaggcca ggagggctgg acagagaaac tagatgaggt cagaggtatg gccagagcag 5100 gtgggcttga ggggagtggg gttgcgtctg acctcgctct gagtgggatg gggagttaga 5160 ggacagtttt gagcagaaga gagccatgat atgacttctt tcttaaaagg atctctgatg 5220 gctgtgctga gaacagaatt gagaggcgag ggatgaggga ggcagaaggg aaaacagtag 5280 gaatcgagtg cagtattcca ggctggagat gtcggttacc ttgactgggg tgtgagcaca 5340 ggaaata 5347 //