Dbfetch
ID OR992439; SV 1; linear; genomic DNA; STD; HUM; 6799 BP. XX AC OR992439; XX DT 11-JAN-2024 (Rel. 144, Created) DT 12-MAR-2024 (Rel. 144, Last updated, Version 4) XX DE Homo sapiens MHC class II antigen (HLA-DQB1) gene, HLA-DQB1*06 allele, DE complete cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-6799 RA Zou H.-Y.; RT ; RL Submitted (19-DEC-2023) to the INSDC. RL Immunogentics and Histocompatiblity Testing Laboratory, Shenzhen Blood RL Center, Nigang West Road, Shenzhen, Guangdong 518035, China XX DR MD5; c854c13c373f72557b0272a4639d8d78. XX CC ##Assembly-Data-START## CC Assembly Method :: TSV v. V2.1 CC Sequencing Technology :: Illumina CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..6799 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene 1..6799 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*06" FT mRNA join(1..519,1957..2226,4776..5057,5567..5677,6142..6165, FT 6775..6799) FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*06" FT /product="MHC class II antigen" FT 5'UTR 1..410 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*06" FT CDS join(411..519,1957..2226,4776..5057,5567..5677,6142..6165, FT 6775..6788) FT /codon_start=1 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*06" FT /product="MHC class II antigen" FT /protein_id="WRK12826.1" FT /translation="MSWKKALRIPGDLRVATVTLMLAMLSSLLAEGRDSPEDFVFQFKG FT MCYFTNGTERVRLVTRYIYNREEYARFDSDVGVYRAVTPQGRPSAEYWNSQKEVLEGTR FT AELDTVCRHNYEVAFRGILQRRVEPTVTISPSRTEALNHHNLMVCSVTDFYPGQIKVRW FT FRNDQEETAGVVSTPLIRNGDWTFQILVMLEMTPQRGDVYTCHVEHPSLQSPITVEWRA FT QSESAQSKMLSGVGGFVLGLIFLGLGLIIRQRSQKGPQGPPPAGLLH" FT 3'UTR 6789..6799 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*06" XX SQ Sequence 6799 BP; 1667 A; 1473 C; 1573 G; 1793 T; 293 other; taatttgctt tattaaaaat cccaagtata ataacaactg gtttttaaca atattacaga 60 gatgtttact gttgaatcgc atttttttct tttgcctctc aaaatccccg aggcattcgt 120 tcttcagctc ttctataatc gagaggaaat tttcacctca gatgttcatc cagtacaatt 180 tgaagacgtc acagtgccag gcactggatt gagaaccttc acaaaaaaaa tgtctgccca 240 gagacagatg aggtccttca gctccagtgc tgattggttc ttttccgagg gaccatccaa 300 tcctgccact cacggaaaca tccacaggtt tttattcttt ctgccaggta catcagatcc 360 atcaggtccg agctgtgttg actaccactg cttttccctt cgtctcagtt atgtcttgga 420 agaaggcttt gcggatcccc ggagaccttc gggtagcaac tgtcaccttg atgctggcga 480 tgctgagctc cctactggct gagggcagag actctcccgg taagtgcagg gcagctgctc 540 tccagagccg ccactctggg aacaggctct ccttgggctg gggtatgggg gatggtgatc 600 tctatgatct tggacacaat ctttcatcaa catttcctct ctcttgggaa agaaagctat 660 gttgcattcc catttatctt ttagtgatga gatgaggaca atccaatccc catcctacag 720 gcttaagcct ggaagaggag gagagaggag agaaagagga gataaagtgt acatttacta 780 ccagcgatag gacaaagtga gcatggggtt atttttgaag atatgaattt ctccaaagac 840 acagcaggat ttgtcattta ggcgtgcccc aagactgcct ggacttagga ttatgagatc 900 ctgcattgga aaatgtgagg cagcaatggt gtctgtagtc tctgtatttg aggaaaattt 960 gtctctattc ctgaccgagt ggagcatttg tggaggcaaa atcttggtgc tgagggaagc 1020 tgactggctg accacagaga gggagtcttc gggtttcact gatttatggg caaatggtga 1080 cttgagtggg attcagagac ccgagttaat ggtggactga atttagtagg aaggaggatg 1140 taaagaaggg aaataacaca tattgtgaaa ccactcactt cagacagaac aatactttat 1200 ataacttctc tctcactcct tctaacatcc tgtgtgtaga tatcatgatt ttcttttaca 1260 caattatact tgtgatatgg atattctgtt acataacctg cccaaactgg tgactgccac 1320 agtttaattg gaatctagtt tatcaaattc aaaagcttgt gctctttcca tgaataaatg 1380 tctctatcta ggactcagag gtgtaggtcc tttccaacat agaagggagt gaacctcaac 1440 gggacttggg agggtaaann nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1500 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1560 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1620 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1680 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1740 nnnnnnnnnn naggaaggca gattccagaa gcccgcaaag aaggcgggca gagctgggca 1800 gagccgccgg gaggatccca ggtctggagc gccaggcacg ggcgggcggg aactggaggt 1860 cgcgcgggcg gttccacagc tccaggccgg gtcagggcgg cggctgcggg ggcggccggg 1920 ctggggcctg actgaccggc cggtgattcc ccgcagagga tttcgtgttc cagtttaagg 1980 gcatgtgcta cttcaccaac gggacggagc gcgtgcgtct tgtgaccaga tacatctata 2040 accgagagga gtacgcgcgc ttcgacagcg acgtgggggt gtaccgcgcg gtgacgccgc 2100 aggggcggcc tagcgccgag tactggaaca gccagaagga agtcctggag gggacccggg 2160 cggagttgga cacggtgtgc agacacaact acgaggtggc gttccgcggg atcttgcaga 2220 ggagaggtga gcgtcgtcgc ccctccgtga ggcccaccct tggccgagac cccgagtttc 2280 tgtgccggga ggggcgatgg gggcgaggtc tctgaaatct gagcccagtt cattccaccc 2340 caggggaaag gaggcggcgg cggggtggtg ggggcaggtg catcggaggg gcggggacct 2400 agggcagagc agggggacaa gcagagttgg ccaggctgcc tagtgtcccc cccagcctcc 2460 ccgtccgtcg gcctcgtcct ccgctctgca cgtttctcgc ctcgtgcctt atgtgtttgc 2520 ctcctcgtac cttaccttcg ctaagcagtt ctctctgccc ccagtgccca ccctcttccc 2580 ctgcccgccg gcctcgctag cactgcccca cccagcaagg cccacgtgcg cagcttgcgc 2640 cgcaggaagc ttcaggcttg gcctggtgga gttagggctg ccccacagct gcgcgcaggg 2700 catccagcaa ttacagttgc gaaataagat attttgactt tttggcttca aatcattatt 2760 catcgtaatt ctgttttctt aaatggctac cactaatggc ggagatcttt gaggcgagag 2820 actgtttaat tattgcatgc ctggtacctg acacattgac tggtatgtgg tgtgagctca 2880 atgatcttct gttaaattca tgaataaatg tactcagctg ccaatccagt taggttcaag 2940 aaaaaaacag aggcttacaa atgaacttta tcaattattt tctaacattt tgcttaatgc 3000 tttcaagtaa actcttactg acttggatct taatagaatt tgtgaataca aagtctgagg 3060 aaaatgtgtt tgctaaaaat aaaaacaatg cttgaatgat gttgtaaggc agagttttaa 3120 tttcttagaa aagctgaaca aatagcacta tgcaaagatc agaagtttgg gaataaatag 3180 gttgaagcta ttaaattatt ggataaaaat agtttcaggt tgcttttggc ctaggttatc 3240 ccctcccccc catcactatc cacttcagga ataaacattc tgaaagtcaa ttttacccat 3300 tcaggaagca cttatttcta gacagttgcc ttatcaaata ccatctatgt tatgtcattt 3360 aatctcacag ctacctgtgc attagagatt agcatcacca ctttatatat cctaatattg 3420 gtacatgata aacactttaa gtaatcagcc cacaattact caccaagatc ttaagcctcc 3480 caaagtacac aacattctta tgttcctcac tacacatatg tagagtctaa gggatgtaag 3540 gccttgttaa agccagtttt gaccagaagc agcaatgagt ctattcctgt ttgttctgtg 3600 tgttaatgcg gcattgaaaa ttcatgatta atcaatccct agtctgaccc cggtgttatc 3660 tatgcaggtt cacaaaactt ttagtttgct ttacactccc ttgccttctt ttgactcaca 3720 tcctaatgcc agcaagtact tatatttttg ctatttcagt tttatttcca taaaatttat 3780 tttatcatct tttctcataa atttgtgccc tctattttta ctcccagtct gttgaagatg 3840 aacaaatctt ataaggccac atagctgact ctgatttcag ttggcctcca ggaaggagaa 3900 cctaaagaaa agttcaagtc caagcagaaa ccatgattcc ttccggatga tggctcaaga 3960 gtgccattta attggggtgc cacctgctga cctcagcaaa tcccagttat atgtatatgt 4020 tcacattaca ggctcattag cccaggccga cctctgcacg gatctcagaa tattttctgt 4080 ggagaacata cacgataatg tctgatttca gaacaagaaa gtaattgtca atagcaagga 4140 aatggagtag ggtagacagc tagtaattaa actcacttgt gcgttaaaaa gaaattaagg 4200 aaaaaaagaa aatgagagaa catattacta aataaagaaa gcacacatta aatatttgct 4260 atagtttcac actaagagaa taaaggaaat gtgataaagt ggcctaaaag gaaaggatga 4320 gatgtgtaaa agaggcgggg aaagatgtgt catttttttt actatgagca gcaatctgag 4380 aagataaagg aattgagttg tggacaaaca tgatgtttga tcaagggtta tttgttttga 4440 aggcctgcct actttttttt caaatattac aaacttttga aataacattc tacttttttt 4500 tcaaatatta caaacttttg aaataacatt ctttttgttt tttgctgtct gttactagat 4560 tgcacattct ataaatgcag ggaccatagt atgttattta tctttgaatt ctcagtgatt 4620 gtcaaattta tatttgttga atgaacctta atccaagact tcgactccag gtatctttcc 4680 actctggtcc aaggagggat ccttcctcat ggtagacgtg gtgtgtgttc tcacatctca 4740 ctcctatgtc ttttcctgtc tgttactgcc ctcagtggag cccacagtga ccatctcccc 4800 atccaggaca gaggccctca accaccacaa cctgatggtc tgctcggtga cagatttcta 4860 tccaggccag atcaaagtcc ggtggtttcg gaatgatcag gaggagacag ccggcgttgt 4920 gtccaccccc cttattagga atggtgactg gactttccag atcctggtga tgctggaaat 4980 gactccccag cgtggagatg tctacacctg ccacgtggag caccccagcc tccagagccc 5040 catcaccgtg gagtggcgta aggggatatt gagtttctgt tactatgggc ccacaagaca 5100 aagagctcct tctgacccat tccttcccat ctcttatccc tgatgtcact actgagctgg 5160 gaatcacagg agactagagc acctcttgct ccatggcaag tgcatcagaa gaatcctggt 5220 ctcatcacct ttccagatgc tagggaaatt actctacata ctgttgctct gaatcccagt 5280 cctgatagct ctgagggact gattcttagg gctggtgact gggatcttag ggtctaaggt 5340 tatggatgag ttcttgaaga gcagagattt gcttccccac tctctcacct attcactgta 5400 tccaaggacc tattggctgg tctttcccct ccttaggggt ggtctgaatg gagaactagg 5460 ttcctttgat gccttcacct tctgcacctc agactggact tcaactcctc agcagggatg 5520 ctatggggtg tggggacaaa cacagacact cagttctgct ctttaggggc tcagtctgaa 5580 tctgcccaga gcaagatgct gagtggcgtt ggaggcttcg tgctggggct gatcttcctt 5640 gggctgggcc ttatcatccg tcaaaggagt cagaaaggtg aggaacccca ggggaaaagg 5700 ggaagatggg ctgtgaccca gaccctctgt tcagagtggt cctgtctgta gattagctct 5760 ttcctcctga ccctgagaag aagtgcgagg agacaggaca agatgggagg aggcattgga 5820 atctgatttt actggttgaa aggtagcgct gtcacagagc tgactgatag agcttattcc 5880 agggcatcct taccattcat cattgtctca ctggctcctt tccaaaagct tcctccatta 5940 agagggtcag agcctcagct tcctttcttt ctagtgacaa tttcctttgt tttaggggat 6000 tttaaattag ggtgctgaag gcctggaaga acatgggtgg gaagagaatg taactctaag 6060 tcatgtgtgt cattttcctt tggggtgaga gagtggctgt ttgtgtaatg agacctttct 6120 ctgcataact tccttttgta agacctcaag ggcctccacc agcaggtaat atttcagcca 6180 tgatccagtg tggggaggca caggtataag agggaagagc atgagctgag tgtacctgac 6240 cacagtggtc catgttcatg gcctatttgc tgctatgagg atcaagactt aggggagaag 6300 tttgccagtt tctaggaatc tccagacatt gttccccaga accaagcctt aactttggtg 6360 gcatcttctt gtgaaatgtg gagccagaac cacagcttaa atgttagaca ctaggatgat 6420 gcccactttg tgccacatga tggtggctac tgcctgtaag cattttccag tgactgaaag 6480 aggctgctag tggtcgggaa gagatatcat ccaatttcct aaaaagactg aacccttcat 6540 attccccaga agaataacag ctgttcccca cctcccacac atctgcatca agctgaagtt 6600 ctgtgtcctc atgagctgat ttcacctttg cacagatctt gggggaggtg atgacaatac 6660 accctggacc tcaactttct ctgtctgaag ctgcaggggg cccctgaagg gtgggggaga 6720 tggcaggccc accaggatac cctgtgctga tcaatgctct tctctcttct ccagggcttc 6780 tgcactgact cctgagact 6799 //