Dbfetch
ID OR513766; SV 1; linear; genomic DNA; STD; HUM; 5711 BP. XX AC OR513766; XX DT 13-OCT-2023 (Rel. 144, Created) DT 14-OCT-2023 (Rel. 144, Last updated, Version 1) XX DE Homo sapiens clone DE-SMS_A-644981 MHC class II DR alpha chain (HLA-DRA) DE gene, HLA-DRA-DRA*01:01:01:01var allele, complete cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-5711 RA Malik A., Busch Y., Schweizer A., Shealy G., Diegel P., Hey L., RA Schaefer M., Peter W.; RT ; RL Submitted (01-SEP-2023) to the INSDC. RL HLA-Laboratory, Stefan-Morsch-Foundation, Dambacher Weg 3-5, Birkenfeld RL 55765, Germany XX DR MD5; c4e49c0ef67784a877aa350e27ca9e08. XX CC ##Assembly-Data-START## CC Assembly Method :: NGSengine v. v2.30 CC Sequencing Technology :: Illumina CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..5711 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="DE-SMS_A-644981" FT /db_xref="taxon:9606" FT gene <1..>5711 FT /gene="HLA-DRA" FT /allele="DRA*01:01:01:01var" FT mRNA join(<1..441,2855..3100,3592..3873,4163..>5711) FT /gene="HLA-DRA" FT /allele="DRA*01:01:01:01var" FT /product="MHC class II DR alpha chain" FT exon <1..441 FT /gene="HLA-DRA" FT /allele="DRA*01:01:01:01var" FT /number=1 FT 5'UTR <1..359 FT /gene="HLA-DRA" FT /allele="DRA*01:01:01:01var" FT CDS join(360..441,2855..3100,3592..3873,4163..4317) FT /codon_start=1 FT /gene="HLA-DRA" FT /allele="DRA*01:01:01:01var" FT /product="MHC class II DR alpha chain" FT /protein_id="WNV59884.1" FT /translation="MAISGVPVLGFFIIAVLMSAQESWAIKEEHVIIQAEFYLNPDQSG FT EFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALANIAVDKANLEIMTKRSNY FT TPITNVPPEVTVLTNSPVELREPNVLICFIDKFTPPVVNVTWLRNGKPVTTGVSETVFL FT PREDHLFRKFHYLPFLPSTEDVYDCRVEHWGLDEPLLKHWEFDAPSPLPETTENVVCAL FT GLTVGLVGIIIGTIFIIKGVRKSNAAERRGPL" FT intron 442..2854 FT /gene="HLA-DRA" FT /allele="DRA*01:01:01:01var" FT /number=1 FT exon 2855..3100 FT /gene="HLA-DRA" FT /allele="DRA*01:01:01:01var" FT /number=2 FT intron 3101..3591 FT /gene="HLA-DRA" FT /allele="DRA*01:01:01:01var" FT /number=2 FT exon 3592..3873 FT /gene="HLA-DRA" FT /allele="DRA*01:01:01:01var" FT /number=3 FT intron 3874..4162 FT /gene="HLA-DRA" FT /allele="DRA*01:01:01:01var" FT /number=3 FT exon 4163..>5711 FT /gene="HLA-DRA" FT /allele="DRA*01:01:01:01var" FT /number=4 FT 3'UTR 4318..>5711 FT /gene="HLA-DRA" FT /allele="DRA*01:01:01:01var" XX SQ Sequence 5711 BP; 1564 A; 1211 C; 1237 G; 1699 T; 0 other; tcactaatgt gcttcaggta tatccctgtc tagaagtcag attggggtta aagagtctgt 60 ccgtgattga ctaacagtct taaatacttg atttgttgtt gttgttgtcc tgtttgttta 120 agaactttac ttctttatcc aatgaacgga gtatcttgtg tcctggaccc tttgcaagaa 180 cccttcccct agcaacagat gcgtcatctc aaaatatttt tctgattggc caaagagtaa 240 ttgatttgca ttttaatggt cagactctat tacaccccac attctctttt cttttattct 300 tgtctgttct gcctcactcc cgagctctac tgactcccaa aagagcgccc aagaagaaaa 360 tggccataag tggagtccct gtgctaggat ttttcatcat agctgtgctg atgagcgctc 420 aggaatcatg ggctatcaaa ggtaggtgct gagggaatga aatctgggac gatagactac 480 gaagcattgg agaaaagacc tatggacatt tggaagataa tgtgtggagt gaaagaatag 540 tgtgacaggt attatgtggt ctcgacagaa agtataacaa attgtggttt ggtggagttc 600 ttccctcacc acaaactgaa gtaagtcaaa tttggtttag agggtcaaaa ctgagttgtg 660 tattgatgaa tagcacggtc ctgctacaag ccaaactggg ggtgggggtg ggggtggggg 720 aggaagaata ttttctggca agcattaaca agttatattt ctgggcttta attattcttt 780 ctggaaaatt agtaaaatta aaaactaaaa accacacata gttttgctag aattaaatga 840 aaaaaaaagt tattagccct gttcttatct gaatacatga tacagtagtt attttttgga 900 gtgtaaatcc tgtcggtata tattgagcac atatattgtg ttgaagatta ctagaaggaa 960 aagtcatcaa aaagcaacaa tttaccccag gaaaagggga gggaaggcat gctgatatga 1020 gttgcctcat gggacagtga tagccattcc ctgccttccc atctccatgg tacagcagat 1080 cttatatcat gttaacttag taatatttcc aagagagtag aaaaataagt aaggaaatgg 1140 ggaatctgat attattgtct ctcatctcca gagcaacatt ggtgctgttg taaagatgta 1200 ctgtagaaaa gtattcttca cccagcgtga cccccacaga aggtgtcagg tagacttgaa 1260 ataagcaaag taataaccca gctcccatac ccatagtggc aattgtagat ttctattgcc 1320 ccaaaagagc catacatagg gatacttacc tagaaagaca gaggatcttc ccttggtttg 1380 tgaagaggca gctagtatat ttgtgtgtgt ttgcatagat gcaaacggta aataaattcc 1440 taggtttatc aatacacagt caaacattaa aatctctcat cttggctggg cacggtggct 1500 cacgcctgta atcccagcac tttgggaggc cgaggcgggc ggatcacgag gtcaagagat 1560 cgagaccgtc ctgggcaaca tggtgaaacc ccgtctctac taaaaataca aaaaattagc 1620 tgggtatggt ggcacacgcc tgtagtccca gctactcggg aggctgaggc aggagaattg 1680 cttgagcccg ggaggcggag gttgcagtga gctgagatgg tgccactgca ctccagcctg 1740 gcgatagagc aagactccgt ctcaaacaac caaaccaaaa caaaacaaaa tatctcacct 1800 tatctttgaa gactaaggaa aaaaaaaatc tcccactcat cgatacactc cacagaggca 1860 gcatactctc ccagtgtagc tttctctttt catgttcatt attcccttgg tgttggttat 1920 tctcaatgtc aatcgtaaca gaacatcttc cataataaca gtcccaattt aaggagcatt 1980 aagataaaag gtggaattgc caaggtcaat ccagacgaga accttctcat agaggtaacc 2040 accgtgtggg tttggatgct gggaagcagg gggactatga cgctacaagg tctcagtctt 2100 aatttttgga gtacttcagt ccccaggtat attttccata gatttggccc ttaaataaag 2160 agaagcttct gactctaaaa tgtaaacagt gcttgttaca gtcttgttga tatattaaga 2220 aattactcac cttatctcat ttaatcttaa aaacaaaccc ctgacaggat caaaaccaca 2280 gcaggactac ataataggaa aactatacat aaataggtag aataatctgc tcaggatcac 2340 taggtaagtt gctgaataag aattcaagat gtttttgatc ccagagttta aaacccaacc 2400 tttcaaacag tgtttccttc ttcttagagt acaatgttct gagaaagaga tcctctggaa 2460 ttctggccta agtgtattta atgcccgggt aaagaaagtg agagaacatt tctctttagg 2520 ggctgctgct ggatttctaa aaagaaaata atttctcagc tagtaacatg gagccaaaca 2580 acagcttcac aagactctgg gttctttagc cctcatctcc ttcaatccac cctctttata 2640 accagtcctt cttgtttttc ccctcccagc tttgttcagc agcatgccct tcacccagac 2700 cttgtcttgt cactcatccc tactcgccat cattctttca ttcctcttgg cccaatctct 2760 ctccaccact tcctgcctac atgtatgtag gttattcatt tccctctctt gattcccccc 2820 acccaactct ctttctccat ttcttgcctt tcagaagaac atgtgatcat ccaggccgag 2880 ttctatctga atcctgacca atcaggcgag tttatgtttg actttgatgg tgatgagatt 2940 ttccatgtgg atatggcaaa gaaggagacg gtctggcggc ttgaagaatt tggacgattt 3000 gccagctttg aggctcaagg tgcattggcc aacatagctg tggacaaagc caacctggaa 3060 atcatgacaa agcgctccaa ctatactccg atcaccaatg gtacctccct ctctgctgca 3120 ctcctggaca tgggaatcca tagtttgaaa gtagttgctt cagctctttg tgttagatta 3180 ttgtaactga ttttccctcc aagggcctaa ccttgccatt aacaagcccc aaattctcat 3240 gccagaggtc tgagaacttt atgggtttga tcctatcttg ttgtgctcaa gtcttgtctc 3300 tgtcatccat ggtctcctac gaagtcattg ccctaagttc atgctagggg agccagaagg 3360 gaagtccttg gatatcttat acctcaatat tggctcaatt tcttggggag ggggtgctgt 3420 cagagattgt tatctgagga tgtgacatag atttctcagg gcacaatttc aactactttt 3480 tcagctttag ggtttttaga tacgtttgta ccacaattga gcatgggagg gagaggggtg 3540 agcctaagca gtgatggctg atttctgtca cgtctgtcat gtgtccccca gtacctccag 3600 aggtaactgt gctcacgaac agccctgtgg aactgagaga gcccaacgtc ctcatctgtt 3660 tcatcgacaa gttcacccca ccagtggtca atgtcacgtg gcttcgaaat ggaaaacctg 3720 tcaccacagg agtgtcagag acagtcttcc tgcccaggga agaccacctt ttccgcaagt 3780 tccactatct ccccttcctg ccctcaactg aggacgttta cgactgcagg gtggagcact 3840 ggggcttgga tgagcctctt ctcaagcact ggggtatgga ccaacactca atctccttta 3900 tttcaaggtt tcctcctatg atgcttgtgt gaaactcggt gttctaactg tttcataata 3960 tctgctacaa ttaatataac tgtcttctcc tactatccag cttcctcctt tttttaatct 4020 gtaattctct caatacatca ttctgtcttc ctcttcttta atctatgaat aacttttctc 4080 tttattaaga accctacatt tgattctgag tgttacttct tcccacactc attaccatgt 4140 actctgcctt atctcccccc agagtttgat gctccaagcc ctctcccaga gactacagag 4200 aacgtggtgt gtgccctggg cctgactgtg ggactggtgg gcatcattat tgggaccatc 4260 ttcatcatca agggagtgcg caaaagcaat gcagcagaac gcagggggcc tctgtaaggc 4320 acatggaggt gagttaggtg tggtcagagg aagacatata tggagatatc tgagggagga 4380 aaacagggtg gggaaaggaa atgtaatgca tttaagagac aaggtaggaa cagatgtggc 4440 tcttgatttc tctttgctag aatgaatcag acattggtat catctggtat cccaaagctt 4500 cagggtctgt catccctttc tatagacggg caccttgatc acggctccag tcttagaaat 4560 catctccagt acctaaaacc attgtttcac attagaatac tgagtctagg gatctagaaa 4620 atacattaga atatggagtc tagggatcta gaaaatactg agtctaggga tctagaaaaa 4680 taagcctcaa gatttgggca catcctagct tgtatttcct ggggcaggtc atcagttcag 4740 aagcatttcc agatcctggc tcctttcagg ttagggtcaa ttcattgcat gaaatgggaa 4800 tctcttagag gccaatgcct gcttttgctt ctttagtctc aaatgtagta tgagaaactc 4860 taaaaaaagg taaagcatgg ttgcttatta tgttcagttg gagagtagga actaactgta 4920 tacagttagt tcatgttgga aaggttagat gaacattgaa agaattttgc aaagtcaaag 4980 gattaagaga gaagaggaag gaatctgaag caaggagctc aaaacggatc ttaaattcct 5040 tggtaactat gtgtgtcttg ctataggtga tggtgtttct tagagagaag atcactgaag 5100 aaacttctgc tttaatgact ttacaaagct ggcaatatta caatccttga cctcagtgaa 5160 agcagtcatc ttcagcgttt tccagcccta tagccacccc aagtgtggtt atgcctcctc 5220 gattgctccg tactctaaca tctagctggc ttccctgtct attgcctttt cctgtatcta 5280 ttttcctcta tttcctatca ttttattatc accatgcaat gcctctggaa taaaacatac 5340 aggagtctgt ctctgctatg gaatgcccca tggggcatct cttgtgtact tattgtttaa 5400 ggtttcctca aactgtgatt tttctgaaca caataaacta ttttgatgat cttgggtgga 5460 atttttggtg tttaagccag ttctttgggt ggcggtgggg ggtggggagt cggtcctggg 5520 gaatatatgt gatcctttcc cggtaaaata tctgaatgtt gaatttatct tataaattct 5580 agaattcatc agacatatcc cggttcattt gggcttggtc tcattttgtg catctgcagg 5640 caaccctctt gttgtggtct agtcctcatc aggaaaacct aaagtggggt tggtttgttg 5700 ggagatctct a 5711 //