Dbfetch
ID OR079582; SV 1; linear; genomic DNA; STD; HUM; 9635 BP. XX AC OR079582; XX DT 04-SEP-2023 (Rel. 144, Created) DT 09-NOV-2023 (Rel. 144, Last updated, Version 10) XX DE Homo sapiens isolate DE-SMS_A-600465-P2 ABC transporter TAP2 (TAP2) gene, DE TAP2*01:02var allele, complete cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-9635 RA Seger S., Busch Y., Schweizer A., Nowak I., Kempken-Sek N., Shealy G., RA Hey L., Schaefer M., Peter W.; RT ; RL Submitted (01-JUN-2023) to the INSDC. RL HLA-Laboratory, Stefan-Morsch-Foundation, Dambacher Weg 3-5, Birkenfeld RL 55765, Germany XX DR MD5; e709c29e91b7db1398212a1aba15d73b. XX CC ##Assembly-Data-START## CC Assembly Method :: NGSengine v. v2.29 CC Sequencing Technology :: Illumina; Oxford Nanopore Technologies CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..9635 FT /organism="Homo sapiens" FT /isolate="DE-SMS_A-600465-P2" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene <1..>9635 FT /gene="TAP2" FT /allele="TAP2*01:02var" FT mRNA join(<1..663,753..867,2631..2761,3045..3250,5580..5777, FT 5943..6071,7598..7786,7964..8137,8315..8474,8868..9004, FT 9370..>9635) FT /gene="TAP2" FT /allele="TAP2*01:02var" FT /product="ABC transporter TAP2" FT exon <1..663 FT /gene="TAP2" FT /allele="TAP2*01:02var" FT /number=1 FT 5'UTR <1..170 FT /gene="TAP2" FT /allele="TAP2*01:02var" FT CDS join(171..663,753..867,2631..2761,3045..3250,5580..5777, FT 5943..6071,7598..7786,7964..8137,8315..8474,8868..9004, FT 9370..9498) FT /codon_start=1 FT /gene="TAP2" FT /allele="TAP2*01:02var" FT /product="ABC transporter TAP2" FT /protein_id="WML75355.1" FT /translation="MRLPDLRPWTSLLLVDAALLWLLQGPLGTLLPQGLPGLWLEGTLR FT LGGLWGLLKLRGLLGFVGTLLLPLCLATPLTVSLRALVAGASRAPPARVASAPWSWLLV FT GYGAAGLSWSLWAVLSPPGAQEKEQDQVNNKVLMWRLLKLSRPDLPLLVAAFFFLVLAV FT LGETLIPHYSGRVIDILGGDFDPHAFASAIFFMCLFSFGSSLSAGCRGGCFTYTMSRIN FT LRIREQLFSSLLRQDLGFFQETKTGELNSRLSSDTTLMSNWLPLNANVLLRSLVKVVGL FT YGFMLSISPRLTLLSLLHMPFTIAAEKVYNTRHQEVLREIQDAVARAGQVVREAVGGLQ FT TVRSFGAEEHEVCRYKEALEQCRQLYWRRDLERALYLLVRRVLHLGVQMLMLSCGLQQM FT QDGELTQGSLLSFMIYQESVGSYVQTLVYIYGDMLSNVGAAEKVFSYMDRQPNLPSPGT FT LAPTTLQGVVKFQDVSFAYPNRPDRPVLKGLTFTLRPGEVTALVGPNGSGKSTVAALLQ FT NLYQPTGGQVLLDEKPISQYEHCYLHSQVVSVGQEPVLFSGSVRNNIAYGLQSCEDDKV FT MAAAQAAHADDFIQEMEHGIYTDVGEKGSQLAAGQKQRLAIARALVRDPRVLILDEATS FT ALDVQCEQALQDWNSRGDRTVLVIAHRLQTVQRAHQILVLQEGKLQKLAQL" FT exon 753..867 FT /gene="TAP2" FT /allele="TAP2*01:02var" FT /number=2 FT exon 2631..2761 FT /gene="TAP2" FT /allele="TAP2*01:02var" FT /number=3 FT exon 3045..3250 FT /gene="TAP2" FT /allele="TAP2*01:02var" FT /number=4 FT exon 5580..5777 FT /gene="TAP2" FT /allele="TAP2*01:02var" FT /number=5 FT exon 5943..6071 FT /gene="TAP2" FT /allele="TAP2*01:02var" FT /number=6 FT exon 7598..7786 FT /gene="TAP2" FT /allele="TAP2*01:02var" FT /number=7 FT exon 7964..8137 FT /gene="TAP2" FT /allele="TAP2*01:02var" FT /number=8 FT exon 8315..8474 FT /gene="TAP2" FT /allele="TAP2*01:02var" FT /number=9 FT exon 8868..9004 FT /gene="TAP2" FT /allele="TAP2*01:02var" FT /number=10 FT exon 9370..>9635 FT /gene="TAP2" FT /allele="TAP2*01:02var" FT /number=11 FT 3'UTR 9499..>9635 FT /gene="TAP2" FT /allele="TAP2*01:02var" XX SQ Sequence 9635 BP; 2253 A; 2250 C; 2325 G; 2807 T; 0 other; aggaggggtg tacggatgag caccggttac tcaggagagc tctcagggtt gaataggata 60 aaatgagaag ccgatggacg ggttaggcgg agccgggcgg gtaggagggc agggacaagg 120 attgggactc cacccccatg atttctcatc tcgtatccgt tgacagagcc atgcggctcc 180 ctgacctgag accctggacc tccctgctgc tggtggacgc ggctttactg tggctgcttc 240 agggccctct ggggactttg cttcctcaag ggctgccagg actatggctg gaggggaccc 300 tgcggctggg agggctgtgg gggctgctaa agctaagagg gctgctggga tttgtgggga 360 cactgctgct cccgctctgt ctggccaccc ccctgactgt ctccctgaga gccctggtcg 420 cgggggcctc acgtgctccc ccagccagag tcgcttcagc cccttggagc tggctgctgg 480 tggggtacgg ggctgcgggg ctcagctggt cactgtgggc tgttctgagc cctcctggag 540 cccaggagaa ggagcaggac caggtgaaca acaaagtctt gatgtggagg ctgctgaagc 600 tctccaggcc ggacctgcct ctcctcgttg ccgccttctt cttccttgtc cttgctgttt 660 tgggtgagtc aggagaggac gttgtgagtt ggaggtggta aaagggcctg ggcaccagca 720 cattcttgtg ttatttttca tgcctctttc aggtgagaca ttaatccctc actattctgg 780 tcgtgtgatt gacatcctgg gaggtgattt tgacccccat gcctttgcca gtgccatctt 840 cttcatgtgc ctcttctcct ttggcaggta ggtggtgggc agctgggtcc atttgctagc 900 cccaaatctt tataggggtc ttcacttccc taactccatt tctaggccct ttcaggcgca 960 aaacacaaaa atacttaaac taaaatatgg tgaatgtagt caccattctg tttcatctat 1020 ccattcattt cttccttcgt tcatattcat ccaatatctt caaagtttat ctgatcttat 1080 tataggaaca agttatgagt gaaggtagta caaaaggaat ttaagtctca ggtggaatgt 1140 ctctcagttg tctctcaaca ttcctaggtc catgaaattc catttctttc tgcctcctac 1200 ctcctacccc taagtctgtc tccaaagtat ctctccaggg tcactctctc aggatgggta 1260 tgcttctccc tctcactctt ctttcccagc tcatcttgct aatccctgaa gatcttactc 1320 tgaggcttat cacctttctt tccagaatca ttactctttt cccttcactt gctttccttt 1380 ctctttctag acatactcaa acaaacaaac tgtttgataa ggctgggact gggatgaggt 1440 gagcgaggca cctggggtgc aaagtttaag gaggtgtgca ctcaccttac ccaaatccca 1500 gccggcctga ttgtctctat ttttatggtc atacttaatt tagagtaccc tcgaaaacca 1560 tttcattgtg ccttcattcc atcctggctg ctttctgctg aaactacagt tgtgcactgc 1620 ataacgatgt ttaggtcaat gatgggccac atataagatg gtggacccac aagattataa 1680 taccatattt ttactgtacc ttttctatgt ttagatacac aaatacttac ttctgtgtta 1740 cagtcgccca cagtgttagg tgcagtcata tgttgtacag atttgtagcc taggagcaat 1800 aggctaaact acatggccta ggtgtgcagt aggctatgac atctaggttt gtgtaagtac 1860 actctatgat gttcatacaa caatgaaacc atctaatgac acatttctca gaacacatcc 1920 ctgtcattaa agtacaaacc ctcattatat catgtctgac tctcccaaac gcctcttcaa 1980 tatggtaact aaatttgtat tagaaacata tattttgtaa aatacatgct tttatgcttt 2040 atattttttc ctctaagtgt tactgtagca tgtagttggt ctaagaggga ttttccaact 2100 cgaaggatga aagatgggaa tcacatgact ctggggctcc agagaattgt gggggcaggg 2160 aatttattat tgcagttccc atgatgaagt atctatgatg acagagaagg gctttgggta 2220 tggggcagga aggagaccaa ggcggaggag acgcacagag ggacaagcct gagggacgct 2280 gggacagaag caagcactgg gatacttgtt ttcacaatat cttttccctt ctattgtagt 2340 tttctattgt gtctagtaca gagtgcactc cataaatact tgtaaatttg tacatgttat 2400 gattttgttc tcacatctag ctcaccatgt ctcctctttc ttcttcctct gtgtattcct 2460 tacctcttct ctctctgtgt gtctgtctct catttctttc tcttttgccc ctcctggcat 2520 gctttcccct gactttgcgc ttctctgcac tcctggcttg ctcctctgtt tcacccgctg 2580 gcttgctcct tctctgcatc tccctcccct cttattctcc taccccacag ctcactgtct 2640 gcaggctgcc gaggaggctg cttcacctac accatgtctc gaatcaactt gcggatccgg 2700 gagcagcttt tctcctccct gctgcgccag gacctcggtt tcttccagga gactaagaca 2760 ggtggggcct ggagtccagg tctgagattc ccatggacat cccttgcccc tcagtgacct 2820 tccacccaca gcctctcctc ctgccttcac ccgtatgcca ggacttgggg atgcttttct 2880 cttgtttggg acagggtgga gaagcagcct ccactgtccc tctgcaagtg aaggaggatg 2940 ttcagaggag ggggctgtgt cagagggaac ggtcaggagg gagtttctgg gggccctgca 3000 gtacacatgg tttccttttt cctcacctgc tctgtccttc ttaggggagc tgaactcacg 3060 gctgagctcg gataccaccc tgatgagtaa ctggcttcct ttaaatgcca atgtgctctt 3120 gcgaagcctg gtgaaagtgg tggggctgta tggcttcatg ctcagcatat cgcctcgact 3180 caccctcctt tctctgctgc acatgccctt cacaatagca gcggagaagg tgtacaacac 3240 ccgccatcag gtgagcgtgc atgtaaggga accccaaagg gagaataaaa ctgacaggtg 3300 aggaggcttc cacatttgtg gctagaggat cccctagaga gagatgttct cttctcagcc 3360 gttaggggag aaggtatatt gtagtatata ctacattttg tttgtccagc catccaacaa 3420 tggatatttg acttcagaag attcatgatt ctccagaact gtaaacaaaa atgtaaagtg 3480 tatgtgaagg tatgggggag ggaataggaa ggggagatga taggcgatga taacttttca 3540 ttagcttctc aaaggagtct gtacatcccc cgcccccact gcgaagatta aaaatggttt 3600 cttagaggct tttaggcagg gagattttcc ctttaaaatc agcagaagaa gtctggatgc 3660 agcataggga aaggaggcgt catcaggaag tcctaagtct gaatgtcagc tccaccttct 3720 ctttttctct tatattgtgg taaaacatac ataacataaa atttaccatt tcaaccattt 3780 gaagtgtaca gttcagtgac atttaggaaa cccacattgt tattgggtaa ccatcatcac 3840 catccatctc cagaactttt ttcatcttcc taaaatgaaa ctctgtaccc actaaatagt 3900 aactgcctac tacccccaac ccctggccgc tggcaacctc cattgtacct tctgtctcca 3960 tgaattgtga tgactccagg tgcggtacgt aagtggaacc atacagtatt tgtctttttg 4020 tgactggcat attttactta gcgtaatgtc ttcaggcctc atccatattg tagcatgtgt 4080 tagaatttcc tcccttttaa ggctgaataa tattctgttg tgtgcatata tcacattttg 4140 attatccatt catctgtcaa tggacatttg cgttgtttcc accttttggc tgttgtgaat 4200 tatgctgctg tggacatgag tgtacacctg tttgaaaccc tgcttttggt tcttttgggt 4260 atatacttag aagtggagct gctggatcat atggcaattc tatttaacaa tttttgagga 4320 accatgtatt agtccatttt tacgctgctg ataaagacat acccaagatt gggcaattta 4380 caaaagaaag aggtttattg gacttacagt tccatgtggc tgggaagacc tcacaatcat 4440 ggcggaaggt gaaagacaca tttcacatgg cagcagacaa gagaaaagac agcttgtgca 4500 ggggaattcc cctttttaaa accattatat ctcgtgagac ttattcaata tcacaagaac 4560 agcatgggaa agacttgccc tcatgattca attacctcct acccagtccc tcccacaaca 4620 catgggaatt caagatcaga tatgggtagg gacacagcca gatcgtatca aaccaccata 4680 cagttttcca tagcggcagc accattttaa attcccacca gcagtgcata aggtttccaa 4740 tttctccaca tcctcatcaa caccactttc tgttgtcttt tttttaatag ccattctaat 4800 ggtgattagg tgattaggat tatctcattg tggttttgat ttgcatttcc ctaatgatta 4860 gtaaatattg agcatctttt cgtgtgattt tggccactta tgtttctttc ttgaaagaat 4920 gtctgcaagt tctttgccca ttttctgatt tttttttaag ttgtgggagt tcactatatg 4980 ttttgcctat taatttccta tcagatatat gattcacaaa tattttcttg tatttcatgg 5040 ttgctttttc actctgttgc tagagttctt tgatgcacaa acgttttaaa ttctgatgaa 5100 gtctgattta tctatttttt gttgcctgtg cgtttggtgt tatatccaag aaatcactgc 5160 caaatctagt ggcatgaggc ttttcttcta cattttccta ggagttttat agtgttagct 5220 cttatgttta ggcctctgat ccatttggaa ttacatctcc acctttctta actatctgtg 5280 gctccttggg aaaactaccc ttctttcctg attcagacac tggggatggg aaaattacct 5340 caaatgaagg ttaaaaaaat tgcatgtatc tcctatacta cctaacactg agagctcaat 5400 aatattttgt tcccttgctc cttcactctt attccttctg gaaagaagag taaggaagag 5460 ggagagaaac agtttggtat ttttaggtag actagggagc atctcactgg ctggagtaag 5520 atgtgggggc ctgctgtctt tgcacatcag ccctggtgtt tgctggccct cttttccagg 5580 aagtgcttcg ggagatccag gatgcagtgg ccagggcggg gcaggtggtg cgggaagccg 5640 ttggagggct gcagaccgtt cgcagttttg gggccgagga gcatgaagtc tgtcgctata 5700 aagaggccct tgaacaatgt cggcagctgt attggcggag agacctggaa cgcgccttgt 5760 acctgctcgt aaggagggta agataccaga gtggttgtga aaggagccca ggaaaggggg 5820 agggcaaggg aagaggaaac tacagctggt tctagaggcc tttgcagctc agtctcatag 5880 aggcagagag ggggaaagaa tgggaagatt cccagcctca tctctttctt ctcctcttcc 5940 aggtgctgca cttgggtgtg cagatgctga tgctgagctg tgggctgcag cagatgcagg 6000 atggggagct cacccagggc agcctgcttt cctttatgat ctaccaggag agcgtgggga 6060 gctatgtgca ggtgagcgag aagccaagcc tgctctcctt ttttccctct ctttttcttt 6120 gtggactcct gggccttggg ctttatttgt tctttttaac aatacaatac aaaaccaaaa 6180 cccgcaagta attttgctat ggagaatttt aaacatatgc caaaaatgag acaaaataat 6240 attacaaact cacatgtata catcctgtgc tttaacaatg atcaactcat gcccaatctt 6300 gttggatctg tatccccagc cacttccccc cacccatatt attctgaagc aaatccaaga 6360 tattgtatac tttcatctgt aaatatttca gtatgtttct taaaaataca aacatcttta 6420 aaagtgtata acaacaaagc cattatcaca ccaaaaaatt aacagtagtt cttaaaattt 6480 atcaaatagt caattgtcaa atttccattt gtggtatcca tgtagtatat gtgtatgagt 6540 gtgtttatta tactttgctt aaatcaggat ccagaaatgg tccacatatt gtgactggtt 6600 gatacatctt ttaagtctgt ctgtctatct atctatccat ccatctatcc atccatccac 6660 ccatcaatcc atgtatctgt ctaaaagttt cccttgcaca gtttatttgt tgaagaaata 6720 ggttgtttgt cctgtggagt ttcttagggt ctggattttg ttgactgaat ccctgtggta 6780 ttatatgctc ttctgcctct gtacttcctg tctattgata gataaaccta gaagcttgtg 6840 agattgaggg gttttttttg gtctttttcc agcaacagta ctttttaggt ggtgatgcat 6900 tcttcctcca agaggcacac aatgtctggt tctctatttg tggcaacatc agccactgat 6960 gagcagtacc tacatccatg acagaattag ggctgcaaaa gggagatact ctatcattct 7020 tcatgtatta gctgaagtag tctatgaagg gagacttccc ctcatctacc atttcattac 7080 ccggtggtac agtttgatga ggaaaggcag agtgagcatt tagatctctt cctacattta 7140 ccagttctca aaaacagcta cttcatccag ggctttattt aaacattttc ctagacactt 7200 gataaacatc ttttttgtgt agagaactgc gctgggcact ctgacggcta caaaggtgag 7260 ttgggcacag tgcctgcatt taaggagctc cccgtctaat caagcaagac agaactgggc 7320 acaagtaata ggaagcagta actgaaaaga tctggggcta gaggcaatgc tgtatggtag 7380 gagaatggac tatatatcct ttatattgca aattggaaca ctggggtatt ggtgccactt 7440 ttaaattccg tccaaattgt acatttaaag gtggagaatc tcttttgagt atggaggagg 7500 agcagtgcag ttgtgagtgg agtgtgtgag gagttgggag ggtggtttct ggtagaagtg 7560 tgtttaatta gccggctctc ccattcctgt tttccagacc ctggtataca tatatgggga 7620 tatgctcagc aacgtgggag ctgcagagaa ggttttctcc tacatggacc gacagccaaa 7680 tctgccttca cctggcacgc ttgcccccac cactctgcag ggggttgtga aattccaaga 7740 cgtctccttt gcatatccca atcgccctga caggcctgtg ctcaaggtgc ctgaaagagg 7800 gaggaaacct ggacccttgc tctctgctgc taatgcataa ttggacatca cagcctatag 7860 ttcatttgcc tctgagaacc tggtcttgcc tctgctaaga agagaaatgg agggattttg 7920 agggagaagg ggcaggccct taactctttt tctggttttc taggggctga cgtttaccct 7980 acgtcctggt gaggtgacgg cgctggtggg acccaatggg tctgggaaga gcacagtggc 8040 tgccctgctg cagaatctgt accagcccac agggggacag gtgctgctgg atgaaaagcc 8100 catctcacag tatgaacact gctacctgca cagccaggtg ggtgaggagg gagaagacag 8160 gggacaggag aggggagcat gtacagagag aggatgggag atccacggga aggcgcacca 8220 ggtgttcatt ctgagggagg taggtgggga ggacaaaagg gcccctgcct tgggggttta 8280 cacatagtcc tctgcccctg tccccgctgc acaggtggtt tcagttgggc aggagcctgt 8340 gctgttctcc ggttctgtga ggaacaacat tgcttatggg ctgcagagct gcgaagatga 8400 taaggtgatg gcggctgccc aggctgccca cgcagatgac ttcatccagg aaatggagca 8460 tggaatatac acaggtatct tctacaaatt gtaagcttgc tccttcagta aaaaagagaa 8520 aatcagactt actcttagtg gtgaaggtcg tgtccctgta gcttgatgtt tgctgttcct 8580 ctgccctttc ctccattcct acgtctcctt ccccacacac tgaattcttc agcctccctc 8640 ttgatcaaga gtctttgttt gcagagagca atgcagcagt ggtgctccct ccatgggcag 8700 ccccgtcagg tccccacccc atggccctcc tcccactggg ccctccccgc actgggccct 8760 cccacctccc gaggtcctac tggaagtacc tgctgtgcac ttgtccctcc ttgtgtgttg 8820 tctgtgtcac ttgtatctga ggaagggaat ttctctgatt tcctcagatg taggggagaa 8880 gggaagccag ctggctgcgg gacagaaaca acgtctggcc attgcccggg cccttgtacg 8940 agacccgcgg gtcctcatcc tggatgaggc tactagtgcc ctagatgtgc agtgcgagca 9000 ggccgtgagt accgtgagag ggcaggggac agtggggcct gggaggggca tgctgggagg 9060 atcagactgt gcagaattgg gcagagggag gacgaaggac ctactagtgg aaacagtctg 9120 tgccttcttg gggttgggga atggaatccg gtggtgtgag ggcagcccca gttccctcct 9180 gggcttccat tcctccagct gtggcagtac agccgggaga gaagggcagt ccaggccttt 9240 atctactgcc ctttcctacc ttcttttatt tcacaccttc tttaccctaa atcataagag 9300 atggtgccca ggtggatgtg gtgtccatct cattcctgtc tttctgaggc actgtgatca 9360 ccccttcagc tgcaggactg gaattcccgt ggggatcgca cagtgctggt gattgctcac 9420 aggctgcaga cagttcagcg cgcccaccag atcctggtgc tccaggaggg caagctgcag 9480 aagcttgccc agctctagga gggacaggac ctctattccc gcctggtgca gcagcggctg 9540 atggactgag gccccaggga tactgggccc tcttctcagg ggcgtctcca ggacccagag 9600 ctgttcctgc tttgagtttc cctagagctg tgcgg 9635 //