Dbfetch
ID OP420525; SV 1; linear; genomic DNA; STD; HUM; 2990 BP.
XX
AC OP420525;
XX
DT 31-MAY-2023 (Rel. 144, Created)
DT 24-JAN-2024 (Rel. 144, Last updated, Version 2)
XX
DE Homo sapiens MHC class I antigen (HLA-B) gene, HLA-B*55extended allele,
DE complete cds.
XX
KW .
XX
OS Homo sapiens (human)
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
XX
RN [1]
RP 1-2990
RA Patel R.P., De Mendonca E.;
RT ;
RL Submitted (07-SEP-2022) to the INSDC.
RL Scientific development, Anthony Nolan histocompatibility laboratory, 77B
RL Fleet Road, LONDON NW3 2QU, United Kingdom
XX
DR MD5; 4b117b8990b03816a4b3c4ef7be1175f.
XX
CC ##Assembly-Data-START##
CC Assembly Method :: NGSengine v. 2.27
CC Sequencing Technology :: Illumina
CC ##Assembly-Data-END##
XX
FH Key Location/Qualifiers
FH
FT source 1..2990
FT /organism="Homo sapiens"
FT /mol_type="genomic DNA"
FT /db_xref="taxon:9606"
FT gene 1..2990
FT /gene="HLA-B"
FT /allele="HLA-B*55extended"
FT mRNA join(1..357,486..755,1001..1276,1852..2127,2232..2348,
FT 2790..2822,2929..2990)
FT /gene="HLA-B"
FT /allele="HLA-B*55extended"
FT /product="MHC class I antigen"
FT exon 1..357
FT /gene="HLA-B"
FT /allele="HLA-B*55extended"
FT /number=1
FT 5'UTR 1..284
FT /gene="HLA-B"
FT /allele="HLA-B*55extended"
FT CDS join(285..357,486..755,1001..1276,1852..2127,2232..2348,
FT 2790..2822,2929..2972)
FT /codon_start=1
FT /gene="HLA-B"
FT /allele="HLA-B*55extended"
FT /product="MHC class I antigen"
FT /protein_id="WBW48834.1"
FT /translation="MRVTAPRTLLLLLWGALALTETWAGSHSMRYFYTAMSRPGRGEPR
FT FIAVGYVDDTQFVRFDSDAASPREEPRAPWIEQEGPEYWDRNTQIYKAQAQTDRESLRN
FT LRGYYNQSEAGSHTWQTMYGCDLGPDGRLLRGHNQLAYDGKDYIALNEDLSSWTAADTA
FT AQITQRKWEAAREAEQLRAYLEGTCVEWLRRYLENGKETLQRADPPKTHVTHHPISDHE
FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRY
FT TCHVQHEGLPKPLTLRWEPSSQSTIPIVGIVAGLAVLAVVVIGAVVATVMCRRKSSGGK
FT GGSYSQAASSDSAQGSDVSLTA"
FT intron 358..485
FT /gene="HLA-B"
FT /allele="HLA-B*55extended"
FT /number=1
FT exon 486..755
FT /gene="HLA-B"
FT /allele="HLA-B*55extended"
FT /number=2
FT intron 756..1000
FT /gene="HLA-B"
FT /allele="HLA-B*55extended"
FT /number=2
FT exon 1001..1276
FT /gene="HLA-B"
FT /allele="HLA-B*55extended"
FT /number=3
FT intron 1277..1851
FT /gene="HLA-B"
FT /allele="HLA-B*55extended"
FT /number=3
FT exon 1852..2127
FT /gene="HLA-B"
FT /allele="HLA-B*55extended"
FT /number=4
FT intron 2128..2231
FT /gene="HLA-B"
FT /allele="HLA-B*55extended"
FT /number=4
FT exon 2232..2348
FT /gene="HLA-B"
FT /allele="HLA-B*55extended"
FT /number=5
FT intron 2349..2789
FT /gene="HLA-B"
FT /allele="HLA-B*55extended"
FT /number=5
FT exon 2790..2822
FT /gene="HLA-B"
FT /allele="HLA-B*55extended"
FT /number=6
FT intron 2823..2928
FT /gene="HLA-B"
FT /allele="HLA-B*55extended"
FT /number=6
FT exon 2929..2990
FT /gene="HLA-B"
FT /allele="HLA-B*55extended"
FT /number=7
FT 3'UTR 2973..2990
FT /gene="HLA-B"
FT /allele="HLA-B*55extended"
XX
SQ Sequence 2990 BP; 555 A; 893 C; 941 G; 601 T; 0 other;
gatcaggacg aagtcccatg tcccggacgg ggctctcagg gtctcaggct ccgagggccg 60
cgtctgcatt ggggaggcgc agcgttgggg attccccact cccacgagtt tcacttcttc 120
tcccaaccta tgtcgggtcc ttcttccagg atactcgtga cgcgtcccca tttcccactc 180
ccattgggtg tcgggtgtct agagaagcca atcagtgtcg ccggggtccc agttctaaag 240
tccccacgca cccacccgga ctcagagtct cctcagacac cgagatgcgg gtcacggcac 300
cccgaaccct cctcctgctg ctctgggggg ccctggccct gaccgagacc tgggccggtg 360
agtgcgggtc gggagggaaa tggcctctgt ggggaggagc gaggggaccg caggcggggg 420
cgcaggaccc ggggagccgc gccgggagga gggtctggcg ggtctcagcc cctcctcgcc 480
cccaggctcc cactccatga ggtatttcta caccgccatg tcccggcccg gccgcgggga 540
gccccgcttc atcgcagtgg gctacgtgga cgacacgcag ttcgtgaggt tcgacagcga 600
cgccgcgagt ccgagagagg agccgcgggc gccgtggata gagcaggagg ggccggagta 660
ttgggaccgg aacacacaga tctacaaggc ccaggcacag actgaccgag agagcctgcg 720
gaacctgcgc ggctactaca accagagcga ggccggtgag tgaccccggc ccggggcgca 780
ggtcacgact ccccatcccc cacgtacggc ccgggtcgcc ccgagtctcc gggtccgaga 840
tccgcctccc tgaggccgcg ggacccgccc agaccctcga ccggcgagag ccccaggcgc 900
gtttacccgg tttcattttc agttgaggcc aaaatccccg cgggttggtc ggggcggggc 960
ggggctcggg ggacggggct gaccgcgggg ccggggccag ggtctcacac ttggcagacg 1020
atgtatggct gcgacctggg gccggacggg cgcctcctcc gcgggcataa ccagttagcc 1080
tacgacggca aagattacat cgccctgaac gaggacctga gctcctggac cgcggcggac 1140
accgcggctc agatcaccca gcgcaagtgg gaggcggccc gtgaggcgga gcagctgaga 1200
gcctacctgg agggcacgtg cgtggagtgg ctccgcagat acctggagaa cgggaaggag 1260
acgctgcagc gcgcgggtac caggggcagt ggggagcctt ccccatctcc tataggtcgc 1320
cggggatggc ctcccacgag aagaggagga aaatgggatc agcgctagaa tgtcgccctc 1380
ccttgaatgg agaatggcat gagttttcct gagtttcctc tgagggcccc ctcttctctc 1440
taggacaatt aagggatgac gtctctgagg aaatggaggg gaagacagtc cctagaatac 1500
tgatcagggg tcctctttga cccctgcagc agccttggga accgtgactt ttcctctcag 1560
gccttgttct ctgcctcaca ctcagtgtgt ttggggctct gattccagca cttctgagtc 1620
actttacctc cactcagatc aggagcagaa gtccctgttc cccgctcaga gactcgaact 1680
ttccaatgaa taggagatta tcccaggtgc ctgcgtccag gctggtgtct gggttctgtg 1740
ccccttcccc accccaggtg tcctgtccat tctcaggctg gtcacatggg tggtcctagg 1800
gtgtcctatg agagatgcaa agcgcctgaa ttttctgact cttcccatca gaccccccaa 1860
agacacacgt gacccaccac cccatctctg accatgaggc caccctgagg tgctgggccc 1920
tgggcttcta ccctgcggag atcacactga cctggcagcg ggatggcgag gaccaaactc 1980
aggacactga gcttgtggag accagaccag caggagatag aaccttccag aagtgggcag 2040
ctgtggtggt gccttctgga gaagagcaga gatacacatg ccatgtacag catgaggggc 2100
tgccgaagcc cctcaccctg agatggggta aggaggggga tgaggggtca tatctcttct 2160
cagggaaagc aggagccctt ctggagccct tcagcagggt cagggcccct cgtcttcccc 2220
tcctttccca gagccatctt cccagtccac catccccatc gtgggcattg ttgctggcct 2280
ggctgtccta gcagttgtgg tcatcggagc tgtggtcgct actgtgatgt gtaggaggaa 2340
gagctcaggt agggaagggg tgaggggtgg ggtctgggtt ttcttgtccc actgggggtt 2400
tcaagcccca ggtagaagtg ttccctgcct cattactggg aagcagcatc cacacagggg 2460
ctaatgcagc ctgggaccct gtgtgccagc acttactctt ttgtgcagca catgtgacaa 2520
tgaaggacgg atgtatcacc ttgatggttg tggtgttggg gtcctgattt cagcattcat 2580
gagtcagggg aaggtccctg ctaaggacag accttaggag ggcagttggt ccaggaccca 2640
cacttgcttt cctcgtgttt cctgatcctg ccttgggtct gtagtcatac ttctggaaat 2700
tccttttggg tccaagacga ggaggttcct ctaagatctc atggccctgc ttcctcccag 2760
tcccctcaca ggacattttc ttcccacagg tggaaaagga gggagctact ctcaggctgc 2820
gtgtaagtgg tgggggtggg agtgtggagg agctcaccca ccccataatt cctcctgtcc 2880
cacgtctcct gcgggctctg accaggtcct gtttttgttc tactccagcc agcgacagtg 2940
cccagggctc tgatgtgtct ctcacagctt gaaaaggtga gattcttggg 2990
//