Dbfetch
ID OL546390; SV 1; linear; genomic DNA; STD; HUM; 3502 BP.
XX
AC OL546390;
XX
DT 08-NOV-2022 (Rel. 144, Created)
DT 16-NOV-2022 (Rel. 144, Last updated, Version 1)
XX
DE Homo sapiens MHC class I antigen (HLA-A) gene, HLA-A*24var allele, complete
DE cds.
XX
KW .
XX
OS Homo sapiens (human)
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
XX
RN [1]
RP 1-3502
RA Kwok J.S.Y., Cheung S.K.F., Ho J.C.Y., Chan Y.;
RT ;
RL Submitted (14-NOV-2021) to the INSDC.
RL Division of Transplantation and Immunogenetics, Department of Pathology,
RL Queen Mary Hospital, 102 Pokfulam Road, Pokfulam, Hong Kong HKG, Hksar
XX
DR MD5; 6225ada60bb8b1b58467653e98834220.
XX
CC ##Assembly-Data-START##
CC Assembly Method :: NGSengine v. 2.22.0; TypeStream Visual v.
CC 2.1.0
CC Sequencing Technology :: Illumina
CC ##Assembly-Data-END##
XX
FH Key Location/Qualifiers
FH
FT source 1..3502
FT /organism="Homo sapiens"
FT /mol_type="genomic DNA"
FT /db_xref="taxon:9606"
FT gene <1..>3502
FT /gene="HLA-A"
FT /allele="HLA-A*24var"
FT mRNA join(<1..373,504..773,1015..1290,1870..2145,2248..2364,
FT 2807..2839,2982..3029,3198..>3502)
FT /gene="HLA-A"
FT /allele="HLA-A*24var"
FT /product="MHC class I antigen"
FT exon <1..373
FT /gene="HLA-A"
FT /allele="HLA-A*24var"
FT /number=1
FT 5'UTR <1..300
FT /gene="HLA-A"
FT /allele="HLA-A*24var"
FT CDS join(301..373,504..773,1015..1290,1870..2145,2248..2364,
FT 2807..2839,2982..3029,3198..3202)
FT /codon_start=1
FT /gene="HLA-A"
FT /allele="HLA-A*24var"
FT /product="MHC class I antigen"
FT /protein_id="UYZ39137.1"
FT /translation="MAVMAPRTLVLLLSGALALTQTWAGSHSMRYFSTSVSRPGRGEPR
FT FIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDEETGKVKAHSQTDRENLRI
FT ALRYYNQSEAGSHTLQMMFGCDVGSDGRFLRGYHQYAYDGKDYIALKEDLRSWTAADTA
FT AQITKRKWEAAHVAEQQRAYLEGTCVDGLRRYLENGKETLQRTDPPKTHMTHHPISDHE
FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRY
FT TCHVQHEGLPKPLTLRWEPSSQPTVPIVGIIAGLVLLGAVITGAVVAAVMWRRNSSDRK
FT GGSYSQAASSDSAQGSDVSLTACKV"
FT variation 485
FT /gene="HLA-A"
FT /replace="c"
FT /note="c.485T>C"
FT exon 504..773
FT /gene="HLA-A"
FT /allele="HLA-A*24var"
FT /number=2
FT exon 1015..1290
FT /gene="HLA-A"
FT /allele="HLA-A*24var"
FT /number=3
FT exon 1870..2145
FT /gene="HLA-A"
FT /allele="HLA-A*24var"
FT /number=4
FT exon 2248..2364
FT /gene="HLA-A"
FT /allele="HLA-A*24var"
FT /number=5
FT exon 2807..2839
FT /gene="HLA-A"
FT /allele="HLA-A*24var"
FT /number=6
FT exon 2982..3029
FT /gene="HLA-A"
FT /allele="HLA-A*24var"
FT /number=7
FT exon 3198..>3502
FT /gene="HLA-A"
FT /allele="HLA-A*24var"
FT /number=8
FT 3'UTR 3203..>3502
FT /gene="HLA-A"
FT /allele="HLA-A*24var"
XX
SQ Sequence 3502 BP; 674 A; 1017 C; 1060 G; 751 T; 0 other;
cagaagcaga ggggtcaggg cgaagtccca gggccccagg cgtggctctc agggtctcag 60
gccccgaagg cggtgtatgg attggggagt cccagccttg gggattcccc aactccgcag 120
tttcttttct ccctctccca acctatgtag ggtccttctt cctggatact cacgacgcgg 180
acccagttct cactcccatt gggtgtcggg tttccagaga agccaatcag tgtcgtcgcg 240
gtcgctgttc taaagtccgc acgcacccac cgggactcag attctcccca gacgccgagg 300
atggccgtca tggcgccccg aaccctcgtc ctgctactct cgggggccct ggccctgacc 360
cagacctggg caggtgagtg cggggtcggg agggaaacgg cctctgcggg gagaagcaag 420
gggcccgcct ggcgggggcg caagacccgg gaagccgcgc cgggaggagg gtcgggcggg 480
tctcagccac tcctcgtccc caggctccca ctccatgagg tatttctcca catccgtgtc 540
ccggcccggc cgcggggagc cccgcttcat cgccgtgggc tacgtggacg acacgcagtt 600
cgtgcggttc gacagcgacg ccgcgagcca gaggatggag ccgcgggcgc cgtggataga 660
gcaggagggg ccggagtatt gggacgagga gacagggaaa gtgaaggccc actcacagac 720
tgaccgagag aacctgcgga tcgcgctccg ctactacaac cagagcgagg ccggtgagtg 780
accccggccc ggggcgcagg tcacgacccc tcatccccca cggacgggcc gggtcgccca 840
cagtctccgg gtccgagatc caccccgaag ccgcgggacc ccgagaccct tgccccggga 900
gaggcccagg cgccttaacc cggtttcatt ttcagtttag gccaaaaatc cccccgggtt 960
ggtcggggcc gggcggggct cgggggactg ggctgaccgc ggggtcgggg ccaggttctc 1020
acaccctcca gatgatgttt ggctgcgacg tggggtcgga cgggcgcttc ctccgcgggt 1080
accaccagta cgcctacgac ggcaaggatt acatcgccct gaaagaggac ctgcgctctt 1140
ggaccgcggc ggacacggca gctcagatca ccaagcgcaa gtgggaggcg gcccatgtgg 1200
cggagcagca gagagcctac ctggagggca cgtgcgtgga cgggctccgc agatacctgg 1260
agaacgggaa ggagacgctg cagcgcacgg gtaccagggg ccacggggcg cctacctgat 1320
cgcctgtagg tctcccgggc tggcctccca caaggagggg agacaattgg gaccaacact 1380
agaatatcgc cctccctctg gtcctgaggg agaggaatcc tcctgggttt ccagatcctg 1440
taccagagag tgactctgag gttccgccct gctctctgac acaattaagg gataaaatct 1500
ctgacggaat gacggaaaga cgatccctcg aatactgatg actggttccc tttgacaccg 1560
gcagcagcct tgggaccgtg acttttcctc tcaggccttg ttctctgctt cacactcaat 1620
gtgtgtgggg gtctgagtcc agcacttctg agtccctcag cctccactca ggtcaggacc 1680
agaagtcgct gttccctcct cagggaatag aagattatcc caggtgcctg tgtccaggct 1740
ggtgtctggg ttctgtgctc tcttccccat cccgggtgtc ctgtccattc tcaagatggc 1800
cacatgcatg ctggtggagt gtcccatgac agatgcaaaa tgcctgaatt ttctgactct 1860
tcccgtcaga cccccccaag acacatatga cccaccaccc catctctgac catgaggcca 1920
ctctgagatg ctgggccctg ggcttctacc ctgcggagat cacactgacc tggcagcggg 1980
atggggagga ccagacccag gacacggagc ttgtggagac caggcctgca ggggatggaa 2040
ccttccagaa gtgggcagct gtggtggtac cttctggaga ggagcagaga tacacctgcc 2100
atgtgcagca tgagggtctg cccaagcccc tcaccctgag atggggtaag gagggagatg 2160
ggggtgtcat gtctcttagg gaaagcagga gcctctctgg agacctttag cagggtcagg 2220
gcccctcacc ttcccctctt ttcccagagc catcttccca gcccaccgtc cccatcgtgg 2280
gcatcattgc tggcctggtt ctccttggag ctgtgatcac tggagctgtg gtcgctgctg 2340
tgatgtggag gaggaacagc tcaggtggag aaggggtgaa gggtggggtc tgagatttct 2400
tgtctcactg agggttccaa gccccagcta gaaatgtgcc ctgtctcatt actgggaagc 2460
accatccaca atcatgggcc gacccagcct gggccctgtg tgccagcact tactcttttg 2520
taaagcacct gtgacaatga aggacagatt tatcaccttg attatggcgg tgatgggacc 2580
tgatcccagc agtcacaagt cacaggggaa ggtccctgac gacagatctc aggagggcga 2640
ttggtccagg gcccacatct gctttcttca tgtttcctga tcctgccctg ggtctgcagt 2700
cacacatttc tggaaacttc tctggggtcc aagactagga ggttcctcta ggaccttaag 2760
gccctggctc ctttctggta tctcacagga cattttcttc ccacagatag aaaaggaggg 2820
agctactctc aggctgcaag taagtatgaa ggaggctgat gcctgaggtc cttgggatat 2880
tgtgtttggg agcccatggg ggagctcaac caccccacaa ttcctcctct agccacatct 2940
tctgtgggat ctgaccaggt tctgtttttg ttctacccca ggcagtgaca gtgcccaggg 3000
ctctgatgtg tctctcacag cttgtaaagg tgagagcttg gagggcctga tgtgtgttgg 3060
gtgttgggcg gaacagtgga cacagctgtg ctatggggtt tctttgcatt ggatgtattg 3120
agcatgcgat gggctgttta aagtgtgacc cctcactgtg acagatatga agttgttcat 3180
gaattttttt tctatagtgt gagacagctg ccttgtgtgg gactgagagg caagagttgt 3240
tcctgccctt ccctttgtga cttgaagaac cctgactttg tttctgcaaa ggcacctgca 3300
tgtgtctgtg ttcatgtagg cataatgtga ggaggtgggg agaccacccc acccccatgt 3360
ccaccatgac cctcttccca cgctgacctg tgctccctcc ccaatcatct ttcctgttgc 3420
agagaggtgg ggctgaggtg tctccatctc tgtctcaact tcatggtgca ctgagctgta 3480
acttcttcct tccctattaa aa 3502
//