Dbfetch
ID OK019990; SV 1; linear; genomic DNA; STD; HUM; 3994 BP. XX AC OK019990; XX DT 20-JUN-2024 (Rel. 144, Created) DT 21-JUN-2024 (Rel. 144, Last updated, Version 1) XX DE Homo sapiens isolate MDA0000313 MHC class I antigen (HLA-B) gene, DE HLA-B*15:21:01:01V allele, complete cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3994 RA Cao K., Mai C., Kim D.; RT ; RL Submitted (01-SEP-2021) to the INSDC. RL Pathology/Laboratory Medicine, University of Texas MD Anderson Cancer RL Center, 6565 MD Anderson BLVD, Houston, TX 77030, USA XX DR MD5; e66705ea00a37d581d71d09b02ae2291. XX CC ##Assembly-Data-START## CC Assembly Method :: One Lambda TSV v. 2.0 CC Assembly Name :: One Lambda AllType NGS CC Sequencing Technology :: Illumina CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..3994 FT /organism="Homo sapiens" FT /isolate="MDA0000313" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene <285..>2972 FT /gene="HLA-B" FT /allele="HLA-B*15:21:01:01V" FT mRNA join(<285..357,486..755,1001..1276,1852..2127,2232..2348, FT 2790..2822,2929..>2972) FT /gene="HLA-B" FT /allele="HLA-B*15:21:01:01V" FT /product="MHC class I antigen" FT CDS join(285..357,486..755,1001..1276,1852..2127,2232..2348, FT 2790..2822,2929..2972) FT /codon_start=1 FT /gene="HLA-B" FT /allele="HLA-B*15:21:01:01V" FT /product="MHC class I antigen" FT /protein_id="UHH90631.1" FT /translation="MRVTAPRTVLLLLSGALALTETWAGSHSMRYFYTAMSRPGRGEPR FT FIAVGYVDDTQFVRFDSDAASPRMAPRAPWIEQEGPEYWDRNTQICKTNTQTYRESLRN FT LRGYYNQSEAGSHIIQRMYGCDVGPDGRLLRGYDQSAYDGKDYIALNEDLSSWTAADTA FT AQITQRKWEAAREAEQLRAYLEGLCVEWLRRYLENGKETLQRADPPKTHVTHHPISDHE FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPKPLTLRWEPSSQSTIPIVGIVAGLAVLAVVVIGAVIATVMCRRKSSGGK FT GGSYSQAASSDSAQGSDVSLTA" XX SQ Sequence 3994 BP; 752 A; 1132 C; 1207 G; 903 T; 0 other; gatcaggacg aagtcccagg tcccggacgg ggctctcagg gtctcaggct ccgagagcct 60 tgtctgcatt ggggaggcgc agcgttgggg attccccact cccacgagtt tcacttcttc 120 tcccaaccta tgtcgggtcc ttcttccagg atactcgtga cgcgtcccca tttcccactc 180 ccattgggtg tcgggtgtct agagaagcca atcagtgtcg ccggggtccc agttctaaag 240 tccccacgca cccacccgga ctcagaatct cctcagacgc cgagatgcgg gtcacggcgc 300 cccgaaccgt cctcctgctg ctctcgggag ccctggccct gaccgagacc tgggccggtg 360 agtgcgggtc gggagggaaa tggcctctgt ggggaggagc gaggggaccg caggcggggg 420 cgcaggaccc ggggagccgc gccgggagga gggtcgggcg ggtctcagcc cctcctcgcc 480 cccaggctcc cactccatga ggtatttcta caccgccatg tcccggcccg gccgcgggga 540 gccccgcttc atcgcagtgg gctacgtgga cgacacccag ttcgtgaggt tcgacagcga 600 cgccgcgagt ccgaggatgg cgccccgggc gccatggata gagcaggagg ggccggagta 660 ttgggaccgg aacacacaga tctgcaagac caacacacag acttaccgag agagcctgcg 720 gaacctgcgc ggctactaca accagagcga ggccggtgag tgaccccggc ccggggcgca 780 ggtcacgact ccccatcccc cacgtacggc ccgggtcgcc ccgagtctcc gggtccgaga 840 tccgcccccc tgaggccgcg ggacccgccc aaaccctcga ccggcgagag ccccaggcgc 900 gtttacccgg tttcattttc agttgaggcc aaaatccccg cgggttggtc ggggcggggc 960 ggggctcggg ggacggggct gaccgcgggg ccggggccag ggtctcacat catccagagg 1020 atgtatggct gcgacgtggg gccggacggg cgcctcctcc gcgggtatga ccagtccgcc 1080 tacgacggca aggattacat cgccctgaac gaggacctga gctcctggac cgcggcggac 1140 acggcggctc agatcaccca gcgcaagtgg gaggcggccc gtgaggcgga gcagctgaga 1200 gcctacctgg agggcctgtg cgtggagtgg ctccgcagat acctggagaa cgggaaggag 1260 acgctgcagc gcgcgggtac caggggcagt ggggagcctt ccccatctcc tataggtcgc 1320 cggggatggc ctcccacgag aagaggagga aaatgggatc agcgctagaa tgtcgccctc 1380 ccttgaatgg agaatggcat gagttttcct gagtttcctc tgagggcccc ctcttctctc 1440 taggacaatt aagggatgac gtctctgagg aaatggaggg gaagacagtc cctaggatag 1500 tgatcagggg tcccctttga cccctgcagc agccttggga accgtgactt ttcctctcag 1560 gccttgttct ctgcctcaca ctcagtgtgt ttggggctct gattccagca cttctgagtc 1620 actttacctc cactcagatc aggagcagaa gtccctgttc cccgctcaga gactcgaact 1680 ttccaatgaa taggagatta tcccaggtgc ctgcgtccag gctggtgtct gggttctgtg 1740 ccccttcccc accccaggtg tcctgtccat tctcaggctg gtcacatggg tggtcctagg 1800 gtgtcccatg agagatgcaa agcgcctgaa ttttctgact cttcccatca gaccccccaa 1860 agacacatgt gacccaccac cccatctctg accatgaggc caccctgagg tgctgggccc 1920 tgggcttcta ccctgcggag atcacactga cctggcagcg ggatggcgag gaccaaactc 1980 aggacaccga gcttgtggag accagaccag caggagatag aaccttccag aagtgggcag 2040 ctgtggtggt gccttctgga gaagagcaga gatacacatg ccatgtacag catgaggggc 2100 tgccgaagcc cctcaccctg agatggggta aggaggggga tgaggggtca tatctgttct 2160 cagggaaagc aggagccctt ctggagccct tcagcagggt cagggcccct catcttcccc 2220 tcctttccca gagccatctt cccagtccac catccccatc gtgggcattg ttgctggcct 2280 ggctgtccta gcagttgtgg tcatcggagc tgtgatcgct actgtgatgt gtaggaggaa 2340 gagctcaggt agggaagggg tgaggggtgg ggtctgggtt ttcttgtccc actgggggtt 2400 tcaagcccca ggtagaagtg ttccctgcct cattactggg aagcagcatc cacacagggg 2460 ctaacgcagc ctgggaccct gtgtgccagc acttactctt ttgtgcagca catgtgacaa 2520 tgaaggacag atgtatcgcc ttgatggttg tggtgttggg gtcctgattc cagcattcat 2580 gagtcagggg aaggtccctg ctaaggacag accttaggag ggcagttggt ccaggaccca 2640 cacttgcttt cctcgtgttt cctgatcctg ccctgggtct gtagtcatac ttctggaaat 2700 tccttttggt tccaagacga ggaggttcct ctaagatctc atggtcctgc ttcctcccag 2760 tcccctcaca ggacattttc ttcccacagg tggaaaagga gggagctact ctcaggctgc 2820 gtgtaagtgg tgggggtggg agtgtggagg agctcaccca ccccataatt cctcctgtcc 2880 cacgtctcct gcgggctctg accaggtcct gtttttgttc tactccagcc agcgacagtg 2940 cccagggctc tgatgtgtct ctcacagctt gaaaaggtga gattcttggg gtctagagtg 3000 ggtggggtgg cgggtctggg ggtgggtggg gcagtgggga aaggcctggg taatggagat 3060 tctttgattg ggatgtttcg cgtgtgtcgt gggctgttca gagtgtcatc acttaccatg 3120 actaaccaga atttgttcat gactgttgtt ttctgtagcc tgagacagct gtcttgtgag 3180 ggaccgagat gcaggatttc ttcacgcctc ccctttgtga cttcaagagc ctctggcatc 3240 tctttctgca aaggcacctg aatgtgtctg cgtccctgtt agcataatgt gaggaggtgg 3300 agagacagcc cacccttgtg tccactgtga cccctgttcc catgctgatc tgtgtttcct 3360 ccccagtcat ctttcttgtt ccagagaggt ggggctggat gtctccatct ctgtctcaac 3420 tttatgtgca ctgagctgca acttcttact tccctactga aaataagaat ctgaatataa 3480 atttgttttc tcaaatattt gctatgagag gttgatggat taattaaata agtcaattcc 3540 tggaatttga aagagcaaat aaagacctga gaaccttcca gaatctgcat gttcgctgtg 3600 ctgagtctgt tgcaggtggg gtgtggagaa ggctgtgggg ggccgagtgt ggatggggcc 3660 tgtgcccatt tggtgttgag tccatcatgg gctttatgtg gttagtcgtc agctgggtca 3720 ccttcactgc tccattgtcc ttgtcccttc agtggaaact tgtccagcgg gagctgtgac 3780 cacagaggct cacacatcgc ccagggcggc ccctgcacac gggggtctct gtgcattctg 3840 agacaaattt tcagagccat tcacctcctg ccctgcttct agagctcctt ttctgctctg 3900 ctcttctgcc ctctctccct gccctggttc tagtgatctt ggtgctgaat ccaatcccaa 3960 ctcatgaatc tgtaaagcag agtctaattt agac 3994 //