Dbfetch
ID MN154486; SV 1; linear; genomic DNA; STD; HUM; 3404 BP. XX AC MN154486; XX DT 20-FEB-2020 (Rel. 143, Created) DT 20-FEB-2020 (Rel. 143, Last updated, Version 1) XX DE Homo sapiens isolate 2018-271-00982 MHC class I antigen (HLA-A) gene, DE HLA-A*68:01:01:02var allele, complete cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3404 RA York S.L., Ivery K.J., Williams J.D.; RT ; RL Submitted (08-JUL-2019) to the INSDC. RL DNA Identity, LabCorp, 1440 York Ct, Burlington, NC 277215, USA XX DR MD5; 4b44f75ee992839dda035af42a343810. XX CC ##Assembly-Data-START## CC Assembly Method :: LAA2 v. 10/2018 CC Coverage :: >100 X CC Sequencing Technology :: PacBio CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..3404 FT /organism="Homo sapiens" FT /isolate="2018-271-00982" FT /mol_type="genomic DNA" FT /country="Argentina" FT /db_xref="taxon:9606" FT gene <248..>3164 FT /gene="HLA-A" FT /allele="HLA-A*68:01:01:02var" FT mRNA join(<248..320,451..720,962..1237,1838..2113,2213..2329, FT 2768..2800,2943..2990,3160..>3164) FT /gene="HLA-A" FT /allele="HLA-A*68:01:01:02var" FT /product="MHC class I antigen" FT CDS join(248..320,451..720,962..1237,1838..2113,2213..2329, FT 2768..2800,2943..2990,3160..3164) FT /codon_start=1 FT /gene="HLA-A" FT /allele="HLA-A*68:01:01:02var" FT /product="MHC class I antigen" FT /protein_id="QIA58919.1" FT /translation="MAVMAPRTLVLLLSGALALTQTWAGSHSMRYFYTSVSRPGRGEPR FT FIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDRNTRNVKAQSQTDGVDLGT FT LRGYYNQSEAGSHTIQMMYGCDVGSDGRFLRGYRQDAYDGKDYIALKEDLRSWTAADMA FT AQTTKHKWEAAHVAEQWRAYLEGTCVEWLRRYLENGKETLQRTDAPKTHMTHHAVSDHE FT ATLRCWALSFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWVAVVVPSGQEQRY FT TCHVQHEGLPKPLTLRWEPSSQPTIPIVGIIAGLVLFGAVITGAVVAAVMWRRKSSDRK FT GGSYSQAASSDSAQGSDVSLTACKV" XX SQ Sequence 3404 BP; 650 A; 985 C; 1040 G; 729 T; 0 other; gtctcaggcc ccgaaggcgg tgtatggatt ggggagtccc agccttgggg attccccaac 60 tccgcagttt cttttctccc tctcccaacc tatgtagggt ccttcttcct ggatactcac 120 gacgcggacc cagttctcac tcccattggg tgtcgggttt ccagagaagc caatcagtgt 180 cgtcgcggtc gcggttctaa agtccgcacg cacccaccgg gactcagatt ctccccagac 240 gccgaggatg gccgtcatgg cgccccgaac cctcgtcctg ctactctcgg gggccctggc 300 cctgacccag acctgggcgg gtgagtgcgg ggtcgggagg gaaacggcct ctgtggggag 360 aagcaagggg cccgcccggc gggggcgcag gacccgggaa gccgcgcctg gaggagggtc 420 gggcgggtct cagccactcc tcgcccccag gctcccactc catgaggtat ttctacacct 480 ccgtgtcccg gcccggccgc ggggagcccc gcttcatcgc cgtgggctac gtggacgaca 540 cgcagttcgt gcggttcgac agcgacgccg cgagccagag gatggagccg cgggcgccgt 600 ggatagagca ggaggggccg gagtattggg accggaacac acggaatgtg aaggcccagt 660 cacagactga cggagtggac ctggggaccc tgcgcggcta ctacaaccag agcgaggccg 720 gtgagtgacc ccggcccggg gcgcaggtca cgacccctca tcccccacgg acgggccagg 780 tcgcccacag tctccgggtc cgagatccgc cccgaagccg cgggaccccg agacccttgc 840 cccgggagag gcccaggcgc ctttacccgg tttcattttc agtttaggcc aaaaatcccc 900 ccgggttggt cggggcgggg cggggctcgg gggaccgggc tgacctcggg gtccgggcca 960 ggttctcaca ccatccagat gatgtatggc tgcgacgtgg ggtcggacgg gcgcttcctc 1020 cgcgggtacc ggcaggacgc ctacgacggc aaggattaca tcgccctgaa agaggacctg 1080 cgctcttgga ccgcggcgga catggcagct cagaccacca agcacaagtg ggaggcggcc 1140 catgtggcgg agcagtggag agcctacctg gagggcacgt gcgtggagtg gctccgcaga 1200 tacctggaga acgggaagga gacgctgcag cgcacgggta ccaggggcca cggggcgcct 1260 ccctgatcgc ctgtagatct cccgggctgg cctcccacaa ggaggggaga caattgggac 1320 caacactaga atatcgccct ccctctggtc ctgagggaga ggaatcctcc tgggtttcca 1380 gatcctgtac cagagagtga ctctgaggtt ccgccctgct ctctgacaca attaagggat 1440 aaaatctctg aaggaatgac gggaagacga tccctcgaat actgatgagt ggttcccttt 1500 gacacacaca ggcagcagcc ttgggcccgt gacttttcct ctcaggcctt gttctctgct 1560 tcacactcaa tgtgtgtggg ggtctgagtc cagcacttct gagtccctca gcctccactc 1620 aggtcaggac cagaagtcgc tgttccctct tcagggacta gaattttcca cggaatagga 1680 gattatccca ggtgcctgtg tccaggctgg tgtctgggtt ctgtgctccc ttccccatcc 1740 caggtgtcct gtccattctc aagatagcca catgtgtgct ggaggagtgt cccatgacag 1800 atgcaaaatg cctgaatgat ctgactcttc ctgacagacg cccccaaaac gcatatgact 1860 caccacgctg tctctgacca tgaagccacc ctgaggtgct gggccctgag cttctaccct 1920 gcggagatca cactgacctg gcagcgggat ggggaggacc agacccagga cacggagctc 1980 gtggagacca ggcctgcagg ggatggaacc ttccagaagt gggtggctgt ggtggtgcct 2040 tctggacagg agcagagata cacctgccat gtgcagcatg agggtttgcc caagcccctc 2100 accctgagat ggggtaagga gggagacggg ggtgtcatgt cttttaggga aagcaggagc 2160 ctctctgacc tttagcaggg tcagggcccc tcaccttccc ctcttttccc agagccgtct 2220 tcccagccca ccatccccat cgtgggcatc attgctggcc tggttctctt tggagctgtg 2280 atcactggag ctgtggtcgc tgctgtgatg tggaggagga agagctcagg tggggaaggg 2340 gtgaagggtg ggtctgagat ttcttgtctc actgagggtt ccaagaccca ggtagaagtg 2400 tgccctgcct cgttactggg aagcaccacc cacaattatg ggcctaccca gcctgggccc 2460 tgtgtgccag cacttactct tttgtaaagc acctgttaaa atgaaggaca gatttatcac 2520 cttgattaca gcggtgatgg gacctgatcc cagcagtcac aagtcacagg ggaaggtccc 2580 tgaggacctt caggagggcg gttggtccag gacccacacc tgctttcttc atgtttcctg 2640 atcccgccct gggtctgcag tcacacattt ctggaaactt ctctgaggtc caagacttgg 2700 aggttcctct aggaccttaa ggccctgact cctttctggt atctcacagg acattttctt 2760 cccacagata gaaaaggagg gagctactct caggctgcaa gtaagtatga aggaggctga 2820 tgcctgaggt ccttgggata ttgtgtttgg gagcccatgg gggagctcac ccaccccaca 2880 attcctcctc tagccacatc ttctgtggga tctgaccagg ttctgttttt gttctacccc 2940 aggcagtgac agtgcccagg gctctgatgt gtctctcaca gcttgtaaag gtgagagcct 3000 ggagggcctg atgtgtgttg ggtgttgggc ggaacagtgg acacagctgt gctatggggt 3060 ttctttccat tggatgtatt gagcatgcga tgggctgttt aaagtgtgac ccctcactgt 3120 gacagatacg aatttgttca tgaatatttt tttctatagt gtgagacagc tgccttgtgt 3180 gggactgaga ggcaagagtt gttcctgccc ttccctttgt gacttgaaga accctgactt 3240 tgtttctgca aaggcacctg catgtgtctg tgttcgtgta ggcataatgt gaggaggtgg 3300 ggagaccacc ccacccccat gtccaccatg accctcttcc cacgctgacc tgtgctccct 3360 ccccaatcat ctttcctgtt ccagagaggt ggggctgagg tgtc 3404 //