Dbfetch
ID MN067531; SV 1; linear; genomic DNA; STD; HUM; 5952 BP. XX AC MN067531; XX DT 12-AUG-2019 (Rel. 141, Created) DT 12-AUG-2019 (Rel. 141, Last updated, Version 1) XX DE Homo sapiens MHC class II antigen (HLA-DRB1) gene, HLA-DRB1*06 allele, DE partial cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-5952 RA Seshasubramanian V., Sathish Kannan A.D., Naganathan C., Manisekar N.K., RA Narayan S., Periathiruvadi S.; RT ; RL Submitted (13-JUN-2019) to the INSDC. RL Jeenomics, Jeevan Stem Cell Foundation, No.22, Wheatcrofts Road, RL Nungambakkam, Chennai, Tamilnadu 600034, India XX DR MD5; 748c5154ab1e0470e3a50426c3486dc2. XX CC ##Assembly-Data-START## CC Assembly Method :: MIA FORA NGS FLEX v. 4.1 CC Assembly Name :: IMGT/HLA Release 3.33.0 CC Coverage :: 40 X CC Sequencing Technology :: Illumina CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..5952 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene <1..>5952 FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*06" FT mRNA join(<70..178,1621..1890,4424..4705,5211..5321,5805..>5828) FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*06" FT /product="MHC class II antigen" FT CDS join(70..178,1621..1890,4424..4705,5211..5321,5805..>5828) FT /codon_start=1 FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*06" FT /product="MHC class II antigen" FT /protein_id="QDY64818.1" FT /translation="MSWKKALRIPGGLRAPTVTLMLAMLSTPVAEGRDPPEDFVLQFKA FT MCYFTNGTERVRYVTRYIYNREEDVRFDSDVGVYRAVTPQGRPDAEYWNSQKDILERTR FT AELDTVCRHNYEVAFRGILQRRVEPTVTISPSRTEALNHHNLLVCSVTDFYPGQIKVRW FT FRNDQEETAGIVSTPLIRNGDWTFQILVMLEMTPQHGDVYTCHVEHPSLQSPITVEWRA FT QSESAQNKMLSGIGGFVLGLIFLGLGLIIRQRSQKGPQGPPPA" XX SQ Sequence 5952 BP; 1540 A; 1334 C; 1461 G; 1617 T; 0 other; tgccagctac atcagatcca tcaggtctga gctgtgttga ctaccactac ttttcccttt 60 gtctcaatta tgtcttggaa gaaggctttg cggatccccg gaggccttcg ggcaccaact 120 gtgaccttga tgctggcgat gctgagcacc ccagtggctg agggcagaga ccctcccggt 180 aagtgcaggg cagctgctct ccagagccgc cactctggga acaggcattc cttgggctgg 240 ggtaggggga tggtgatctc catgatctcg gacacaatct ttcatcaaca tttcctctct 300 tttgggaaag aaagctatgt tgcattccca tttatctttt agtgatgagg tgaggacaat 360 ccaatcccca tcctacaggc ttaagcctgg aagaagagga gagaggagag gaaagaggag 420 ataaagtgta catttactac cagtgatagg acaaagtgag catgggatta tttttgaaaa 480 tatgaatttc tccaaagaca cagcaggatt tgccgtttag gcgtgcccca agattttgcc 540 tggactaaat attatgggat cctgcattgg gaaatacaag gcagcaatga tgtctgtagt 600 ctccgtattt gaggaaaatt agtctgtatt cccaactgac tggagcgttt gtggaggcaa 660 aatcttggta ctgagggaag ctgactggct gaccacagag agggagtctt caggtttcac 720 tgatttatgg gcaaatggtg acttgagtgg gattcagagg cccgagttga tggtggacta 780 aatttagaag aaaggaggat gcaaagaggg gaaataacac aattgtgaaa ccactcactt 840 cagacacaga acaatacttt atgtaaattc tctctccttc taacatcctg tgtgtagata 900 tcatgatttt cctttacaca attatacttg tgatatggat attctgttac ataacctgct 960 caagctggtg actgccacag tttaattgga atctagttta tcaaattcaa aagcttgtgc 1020 tctttccatg aataaatgtt tctatctagg actcagaggt gtaggtcctt tctaacatag 1080 aagggagtga acctcaacgg gacttggtag ggtaaatcca ggcatgggaa ggaaggtatt 1140 ttacccaggg accaagagaa tacgcgtatc agaacgagga caggcttaat tcctggacct 1200 gtctcgtcat tcccttgaac tctcaagttt ttgtggatta actatatctc tgaggtatcc 1260 aggagcttca tgaaaaatgg gatttcatgc gagaacgccc tgatccctct aagtgtagag 1320 gtccatgtaa aatcagcccg actgcctctt cgctgagttc actggctcag gcagggacag 1380 ggctttcctc cctttcctgg ctgtaggaag gcagattccc gaagccccca gagagggcgg 1440 gcagggctga gcagagccgc cgggaggatc ccagttctgg agcgccagac acgggcaggc 1500 gggaactgga ggtcgcgcgg gcggttccac agctccgggc cgggtcaggg cggcggctgc 1560 gggggcggcc gggctagggc caggctgggg cctgactgac cggccggtga ttccccgcag 1620 aggatttcgt gctccagttt aaggccatgt gctacttcac caatgggacg gagcgcgtgc 1680 gttatgtgac cagatacatc tataaccgag aggaggacgt gcgcttcgac agcgacgtgg 1740 gggtgtatcg ggcggtgacg ccgcaggggc ggcctgacgc cgagtactgg aacagccaga 1800 aggacatcct ggagaggacc cgagcggagt tggacacggt gtgcagacac aactacgagg 1860 tggcgttccg cgggatcttg cagaggagag gtgagcgtgg ttgaccctcc gtgaggcgca 1920 cccttggccg ggaccccgag tctctgtgcc gggaggggcg atgggggcgc ggcctctgaa 1980 atctgagcct cgttcattcc acgccaggag acaggaggcg gcggaggggg tggtgggggc 2040 aggtgcaccg gaggagcggg gacctagggc agagcagggg gacaagcaga gttgactagg 2100 ctgcctagtg tccccccagc ctccccgtcc gtcggcttcg tcctctgctc tgcaggtttc 2160 tcgccttctg ccttgtgcgt ttgcctcctc gtgccttacc tttactaagc agttctctct 2220 gcccccagtg cccaccctct tcccctgccc gcctgccccg ctagtactgc cccacccagc 2280 aaggcccacg tacgcagctc gcgcctcagg aagcttcagg cttggcctgg tggagttagg 2340 gctgccccac aactgcgctc agggcatcca gcaattacag ttgcgaaata agatattttg 2400 actttttggc ttcaaatcat tattcatcgt aattctgttt tcttaaatgg ctatcactca 2460 tggcggagat ctttgaggcg agagactgtt taattattgc atgcttggta cctgacacat 2520 tgactggtat gtggtatgag ctcaatgatc ttccgttaaa ttcatgaata aatgtactca 2580 gctgccaatc catttaggtt cgagaaaaaa cagaggctta caaatggact taattaatta 2640 ctttctatca ttttgcttaa tgcttcaaag taaactctta ttgacttgga tcttaataga 2700 atttgtgaat acaaagtctg aggaaaaaag tgtttgctaa aaataaaaac agtgcttgaa 2760 tgatgttgta aggcagagtt ttaatttctt agaaaagctg aacaaatggc acaatgcaaa 2820 gagcagaagt ttgggaataa ataggttgaa gccattaaat tattggataa aaatagtttc 2880 aagttgcttt tggcctaggt tctccccttc ccccatcact atccacttca ggaataaaca 2940 ttctgaaagt caattttacc cattcaggtg gcacttattt ctagacagtt gccttatcaa 3000 ataccatata tgttatgtca tttaatctca cagttacctg tgcattagag attagcatca 3060 ccactttgta tatgctaata ttggtacatg ataaacactt taagtaatca acccacaatt 3120 actcaccaag accttaagcc tcccaaagta tacaacattc ttatgttcct cactgcacat 3180 ctgtagagtc taagagatgt aaggccttgt taaagccagt tttgaccaga agcagcaatg 3240 agtctattcc tgtttgttct ccatgttaat ggggcattga aaattcactg attaatcaat 3300 ccctagtctg accccagtgt tacctatgca ggttcacaaa actttcagtt tactttatac 3360 tcccttgcct tcttttgact cacaacctaa tgccagcaag tacttatatt tttgctattt 3420 cagttctatt tccataaaat ttattttatc atcttttctc ataaatttgc gccctctatt 3480 tttactccca gtctgtttaa gatgaacaaa tcttataagg ccacataggt gactgtgatt 3540 tcagttggac tccaggaagg agaacctgaa gaaaagttca agtccaagca gaaactgtga 3600 tttcttccgg atgatggctc aagagtgccg tctaattggg gtgcaacctg ctgacctcag 3660 caaatcccag ttatatgtat atgttcacat tacaggctca ttaacccagg cagacctctg 3720 cacagatctc agaatatttt ctatagagaa cgtacatgat aatgtctgat ttcagaacaa 3780 gaaagtaatt ctcaatacca aggaaatgga gtggggtaga cagctagtaa ttaaactcac 3840 ttgtgcgtta aaaagaaatt aaggaaaaaa agaaaatgag agaacatatt actaaataag 3900 gaaagcacac attaaatatt tgctatagtt tcacactaag agaataaagg aaatgcaata 3960 aagtggcctg aaaagtaaag gatgagatgt gtaaagaggc ggggaaagat gtgtcatttt 4020 ttttactatg agcagcaatc tgagaagata aaggaatggg caaacgtgat gtttgatcag 4080 tgttatttgt tttcaaggcc tgcctacttt ttttttcaaa tattacaaat ttttgaagta 4140 acattctttt tgttttttgc tgtctgttac tagattctat aaagtaaatt ctataaagta 4200 aattatgtta cacattctat aaaggcaggg accatggtat gttgtttatc tttggattct 4260 cagtgattgt caaatttata tttgttgaat gaaccttgat ccaagacttg gactccaggt 4320 atctttccac tctggttcca aggagggacc ttcctcatgg tggacgtgct gtgtggtctc 4380 acatctcact cctatgtctt ttcctgtctg ttactgccct cagtggagcc cacagtgacc 4440 atctccccat ccaggacaga ggccctcaac caccacaacc tgctggtctg ctcggtgaca 4500 gatttctatc caggccagat caaagtccgg tggtttcgga atgaccagga ggagacagct 4560 ggcattgtgt ccacccccct tattaggaac ggtgactgga ccttccagat cctggtgatg 4620 ctggaaatga ctccccagca tggagacgtc tacacctgcc acgtggagca ccccagcctc 4680 cagagcccca tcaccgtgga gtggcgtaag gggatattga gtttctgtta ctatgggccc 4740 cacaagacaa agagctcctt ctgatccatt ccttcccatc tcttatccct gatgtcacta 4800 ctgagctggg aatcacagaa gactagacat ctcttgctcc atggcaagtg catcagaaga 4860 atcctgatct catcaccttt ccagatgcta gggaaattac tctacgtact gttgctctag 4920 atcccagtcc cgacagctct cagggactga ttcttagggc tggtgattga gatcttaggg 4980 tctaaggtta tggatgagtt cctgaggagc agagacttac ttccctactc tctcacctac 5040 tcactgtatc caaggaccta ttggctttct ctcccttacg ggtggtctga atggaggact 5100 agcttccttt gacgccttca cctcctgcac ctcagactgg acttcagctc ctcagcaggg 5160 atgctatggg gtgtggagac aaacactgac actcaggctg tactccttag gggctcagtc 5220 tgaatctgcc cagaacaaga tgctgagtgg cattggaggc ttcgtgctgg ggctgatctt 5280 cctcgggctg ggccttatca tccgtcaaag gagtcagaaa ggtgaggaac cctggaggaa 5340 aaggggaaga tgggctgcga cccagaccct ttgttcagag aggtcctgtc tttggacgta 5400 gctctttcct cctgaccctg agaggaagaa ggctaggctg gaggtgggag gagacaggac 5460 aagattggaa aaggcattgg aatctgattt tactggttga aaggtagccc tgtcacagag 5520 ctgactgata gagcttattg caggacaccc ttaccattta tcattgtctc actggctcct 5580 ttccaaaagc ttcctccatt aagagggtca gagcctcggc ctccttgcct tctagtgaaa 5640 atttcctttg ttttagggga ttttaaatta gggtgcttaa ggccttgaag aacatgggtg 5700 ggaagagaat ataactaatt aagtcatgtg tgtcattttc ctttgggatg agagagtgtc 5760 tgtttgtgta atgagacctt tctctgcata acttcctttt gtaggacctc aagggcctcc 5820 accagcaggt aatatttcag ccatgatcca gtatagggag gacacaggta taagggggaa 5880 gagcataagc tgagtggacc tgaccacatg atctctgttc atggtatatt tgctgctatg 5940 aggatcaaga ct 5952 //