Dbfetch
ID MK170185; SV 1; linear; genomic DNA; STD; HUM; 1798 BP. XX AC MK170185; XX DT 10-DEC-2018 (Rel. 139, Created) DT 10-DEC-2018 (Rel. 139, Last updated, Version 1) XX DE Homo sapiens MHC class I antigen (HLA-A) gene, HLA-A*33:NEW allele, DE complete cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RC Publication Status: Available-Online prior to print RP 1-1798 RX PUBMED; 30421532. RA Cargou M., Elsermans V., Top I., Guidicelli G., Visentin J.; RT "Characterization of the novel HLA-A*03:315 allele by sequencing-based RT typing"; RL HLA. 0:0(2018). XX RN [2] RP 1-1798 RA Cargou M., Elsermans V., Top I., Guidicelli G., Visentin J.; RT ; RL Submitted (14-NOV-2018) to the INSDC. RL Immunology and Immunogenetics Laboratory, Bordeaux University Hospital, RL Place Amelie Raba-Leon, Bordeaux 33076, France XX DR MD5; 6005e762f480dd77549a90538bf88055. XX CC ##Assembly-Data-START## CC Assembly Method :: TypeStream Visual v. 1.1.0.27232; MIA FORA CC FLEX v. 3.1 CC Sequencing Technology :: Illumina; IonTorrent CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..1798 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene <1..>1798 FT /gene="HLA-A" FT /allele="HLA-A*33:NEW" FT mRNA join(<1..73,174..443,544..819,920..1195,1296..1412, FT 1513..1545,1646..1693,1794..>1798) FT /gene="HLA-A" FT /allele="HLA-A*33:NEW" FT /product="MHC class I antigen" FT CDS join(1..73,174..443,544..819,920..1195,1296..1412, FT 1513..1545,1646..1693,1794..1798) FT /codon_start=1 FT /gene="HLA-A" FT /allele="HLA-A*33:NEW" FT /product="MHC class I antigen" FT /db_xref="GOA:A0A3S8IFC7" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:A0A3S8IFC7" FT /protein_id="AZH23738.1" FT /translation="MAVMAPRTLLLLLLGALALTQTWAGSHSMRYFTTSVSRPGRGEPR FT FIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDRNTRNVKAHSQIDRVDLGT FT LRGYYNQSEAGSHTIQMMYGCDVGSDGRFLRGYQQDAYDGKDYIALNEDLRSWTAADMA FT AQITQRKWEAARVAEQLRAYLEGTCVEWLRRHLENGKETLQRTDPPRTHMTHHAVSDHE FT ATLRCWALSFYPAEITLTWQRDGDDQTQDTELVETRPAGDGTFQKWASVVVPSGQEQRY FT TCHVQHEGLPKPLTLRWEPSSQPTIPIVGIIAGLVLFGAVFAGAVVAAVRWRRKSSDRK FT GGSYSQAASSDSAQGSDMSLTACKV" FT gap 74..173 FT /estimated_length=unknown FT gap 444..543 FT /estimated_length=unknown FT gap 820..919 FT /estimated_length=unknown FT gap 1196..1295 FT /estimated_length=unknown FT gap 1413..1512 FT /estimated_length=unknown FT gap 1546..1645 FT /estimated_length=unknown FT gap 1694..1793 FT /estimated_length=unknown XX SQ Sequence 1798 BP; 213 A; 331 C; 369 G; 185 T; 700 other; atggccgtca tggcgccccg aaccctcctc ctgctactct tgggggccct ggccctgacc 60 cagacctggg cggnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 120 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnngctccca 180 ctccatgagg tatttcacca catccgtgtc ccggcccggc cgcggggagc cccgcttcat 240 cgccgtgggc tacgtggacg acacgcagtt cgtgcggttc gacagcgacg ccgcgagcca 300 gaggatggag ccgcgggcgc cgtggataga gcaggagggg ccggagtatt gggaccggaa 360 cacacggaat gtgaaggccc actcacagat tgaccgagtg gacctgggga ccctgcgcgg 420 ctactacaac cagagcgagg ccgnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 480 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 540 nnngttctca caccatccag atgatgtatg gctgcgacgt ggggtcggac gggcgcttcc 600 tccgcgggta ccagcaggac gcctacgacg gcaaggatta catcgccttg aacgaggacc 660 tgcgctcttg gaccgcggcg gacatggcgg ctcagatcac ccagcgcaag tgggaggcgg 720 cccgtgtggc ggagcagttg agagcctacc tggagggcac gtgcgtggag tggctccgca 780 gacacctgga gaacgggaag gagacgctgc agcgcacggn nnnnnnnnnn nnnnnnnnnn 840 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 900 nnnnnnnnnn nnnnnnnnna cccccccagg acgcatatga ctcaccacgc tgtctctgac 960 catgaggcca ccctgaggtg ctgggccctg agcttctacc ctgcggagat cacactgacc 1020 tggcagcggg atggggacga ccagacccag gacacggagc tcgtggagac caggcctgca 1080 ggggatggaa ccttccagaa gtgggcgtct gtggtggtgc cttctggaca ggagcagaga 1140 tacacctgcc atgtgcagca tgagggtctc cccaagcccc tcaccctgag atgggnnnnn 1200 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1260 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnagccg tcttcccagc ccaccatccc 1320 catcgtgggc atcattgctg gcctagttct ctttggagct gtgttcgctg gagctgtggt 1380 cgctgctgtg aggtggagga ggaagagctc agnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1440 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1500 nnnnnnnnnn nnatagaaaa ggagggagct actctcaggc tgcaannnnn nnnnnnnnnn 1560 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1620 nnnnnnnnnn nnnnnnnnnn nnnnngcagt gacagtgccc agggctctga tatgtctctc 1680 acagcttgta aagnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1740 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnntgtga 1798 //