Dbfetch
ID MH458419; SV 1; linear; genomic DNA; STD; HUM; 3546 BP.
XX
AC MH458419;
XX
DT 24-JAN-2019 (Rel. 139, Created)
DT 10-MAR-2021 (Rel. 144, Last updated, Version 4)
XX
DE Homo sapiens MHC class I antigen (HLA-F) gene, HLA-F*01:03:01:03 allele,
DE complete cds.
XX
KW .
XX
OS Homo sapiens (human)
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
XX
RN [1]
RP 1-3546
RX PUBMED; 30556320.
RA Paganini J., Ramdane A., Gouret P., Chiaroni J., Di Cristofaro J.;
RT "Validation of new HLA-F alleles assigned by next-generation sequencing";
RL HLA 93(2-3):131-132(2019).
XX
RN [2]
RP 1-3546
RA Paganini J., Di Cristofaro J.;
RT ;
RL Submitted (08-JUN-2018) to the INSDC.
RL Biologie des Groupes Sanguins, Etablissement Francais du Sang PACA Corse,
RL Faculte de Medecine 27, bd Jean Moulin, Marseille 13005, France
XX
DR MD5; 12b02675cd78964458b6fbb46874d49b.
XX
CC ##Assembly-Data-START##
CC Assembly Method :: Polypheme v. 1
CC Sequencing Technology :: Illumina; Sanger dideoxy sequencing
CC ##Assembly-Data-END##
XX
FH Key Location/Qualifiers
FH
FT source 1..3546
FT /organism="Homo sapiens"
FT /mol_type="genomic DNA"
FT /db_xref="taxon:9606"
FT gene <301..>3244
FT /gene="HLA-F"
FT /allele="HLA-F*01:03:01:03"
FT mRNA join(<301..364,495..764,1010..1285,1868..2143,2284..2400,
FT 2848..2880,3240..>3244)
FT /gene="HLA-F"
FT /allele="HLA-F*01:03:01:03"
FT /product="MHC class I antigen"
FT CDS join(301..364,495..764,1010..1285,1868..2143,2284..2400,
FT 2848..2880,3240..3244)
FT /codon_start=1
FT /gene="HLA-F"
FT /allele="HLA-F*01:03:01:03"
FT /product="MHC class I antigen"
FT /db_xref="GOA:Q5JZ47"
FT /db_xref="InterPro:IPR001039"
FT /db_xref="InterPro:IPR003006"
FT /db_xref="InterPro:IPR003597"
FT /db_xref="InterPro:IPR007110"
FT /db_xref="InterPro:IPR011161"
FT /db_xref="InterPro:IPR011162"
FT /db_xref="InterPro:IPR013783"
FT /db_xref="InterPro:IPR036179"
FT /db_xref="InterPro:IPR037055"
FT /db_xref="UniProtKB/TrEMBL:Q5JZ47"
FT /protein_id="AZS18901.1"
FT /translation="MAPRSLLLLLSGALALTDTWAGSHSLRYFSTAVSRPGRGEPRYIA
FT VEYVDDTQFLRFDSDAAIPRMEPREPWVEQEGPQYWEWTTGYAKANAQTDRVALRNLLR
FT RYNQSEAGSHTLQGMNGCDMGPDGRLLRGYHQHAYDGKDYISLNEDLRSWTAADTVAQI
FT TQRFYEAEEYAEEFRTYLEGECLELLRRYLENGKETLQRADPPKAHVAHHPISDHEATL
FT RCWALGFYPAEITLTWQRDGEEQTQDTELVETRPAGDGTFQKWAAVVVPPGEEQRYTCH
FT VQHEGLPQPLILRWEQSPQPTIPIVGIVAGLVVLGAVVTGAVVAAVMWRKKSSDRNRGS
FT YSQAAV"
XX
SQ Sequence 3546 BP; 733 A; 963 C; 1059 G; 791 T; 0 other;
gggaggggga gggcaaagtc ccagggcccc aggagtggct ctcaagggct caggccccga 60
ggcggtgtct ggggttggga ggctcagtat tgagaattcc ccatctcccc agagtttctc 120
tttctctccc aacccgtgtc aggtccttct tcctggatac tcataacgcg gccccatttc 180
tcactcccat tgggcgtcgc gtttctagag aagccaatca gtgtcgccgc agttcccagg 240
ttctaaagtc ccacgcaccc cgcgggactc atatttttcc cagacgcgga ggttggggtc 300
atggcgcccc gaagcctcct cctgctgctc tcaggggccc tggccctgac cgatacttgg 360
gcgggtgagt gcggggtcca gagagaaacg gcctctgtgg ggaggagtga ggggcccgcc 420
cggtgggggc gcaggactca gggagccgcc tccggaggag ggtctggcgg gtctcagccc 480
ctcctcgccc ccaggctccc actccttgag gtatttcagc accgctgtgt cgcggcccgg 540
ccgcggggag ccccgctaca tcgccgtgga gtacgtagac gacacgcaat tcctgcggtt 600
cgacagcgac gccgcgattc cgaggatgga gccgcgggag ccgtgggtgg agcaagaggg 660
gccgcagtat tgggagtgga ccacagggta cgccaaggcc aacgcacaga ctgaccgagt 720
ggccctgagg aacctgctcc gccgctacaa ccagagcgag gctggtgagt gaacccggcc 780
gggggcgcag gtcacgacca ccccccatcc gccacggacc gcccgggtcc ctcagagtct 840
ccggatccga aatctacccc gaggcagcgg gacccgccca gaccctccac ccgggagagt 900
cccaggcgcc tttacccagg ttcattttca gtttaggcca aaatccccgc gggttgggcg 960
gggagggggc ggggctagct gggcggggct gactgcgggg accggctagg gtctcacacc 1020
ctccagggaa tgaatggctg cgacatgggg cccgacggac gcctcctccg cgggtatcac 1080
cagcacgcgt acgacggcaa ggattacatc tccctgaacg aggacctgcg ctcctggacc 1140
gcggcggaca ccgtggctca gatcacccag cgcttctatg aggcagagga atatgcagag 1200
gagttcagga cctacctgga gggcgagtgc ctggagttgc tccgcagata cttggagaat 1260
gggaaggaga cgctacagcg cgcaggtacc aggggccatg ggcgccttcc ctatctcctg 1320
tagatctctt gggatggcct cgcacaaggt tgggaggaaa gtggacccaa tgctaggata 1380
tcgccctccc tctagtcctg agtaggaaga atcttcctgg ctttcgagat ccggtaccag 1440
agagtgactg tgagagtccg ccctgctctc tgggacaatt aagggatgaa atttctgagg 1500
gaatggaggg aagacagtcc ctggaatacc gatccgcggt cccctttgag ccctccaaca 1560
gccttgggcc ccgtgacttt tctctcaagt tttgttctct gcctcacact caatgtgttt 1620
gaggctctga ttccagtccc tcggcctcca cttaggtcag ggccagaagt ccctgctccc 1680
ccctcagaga ctctaacttt ccaaggaata ggagattttc ccaggtgtct gtgtccaggc 1740
tggtgtctgg gttctgtgct cccttcccca ccccaggtgt cctgtccatt ctcaggttgg 1800
tcacatgggt gctgctgggg tttcccatga ggagtgcaaa gtgcctgaat tttctgactc 1860
ttctcagatc ctccaaaggc acacgttgcc caccacccca tctctgacca tgaggccacc 1920
ctgaggtgct gggccctggg cttctaccct gcggagatca cgctgacctg gcagcgggat 1980
ggggaggaac agacccagga cacagagctt gtggagacca ggcctgcagg ggatggaacc 2040
ttccagaagt gggccgctgt ggtggtgcct cctggagagg aacagagata cacatgccat 2100
gtgcagcacg aggggctgcc ccagcccctc atcctgagat ggggtaagga gggagatggg 2160
taaagagggg aacgaggggt catgtctttt ctcagggaaa gcaggagccc ttctggagct 2220
cttcagcagg gtcagggctg aggcctggag atcagggccc ctcaccttcc cttcctttcc 2280
cagagcagtc tccccagccc accatcccca tcgtgggcat cgttgctggc cttgttgtcc 2340
ttggagctgt ggtcactgga gctgtggtcg ctgctgtgat gtggaggaag aagagctcag 2400
gtaggaaggg gtgaggagtg gagtctgagt tttcttgtcc cactgggggt tgcaagcccc 2460
aagtagaagt gtgccctgcc tcattactgg gaagcaccat ccacactcat gggtctaccc 2520
agcctgggcc ctgtgtgcca gcacctactc atttgtaaag ctcctgtgaa aatgaaggac 2580
agattcttca cttcgatgat tatggtggtg atgggacctg atcccagcag tcacaaatca 2640
caggggaagg tccctgctga tgacagacct caggagggca gttggtccag gacccacatc 2700
tgctttcttc atatttcttg atcctgccct ggatctacag ttacactttt ctggaaactt 2760
ctctgggatc aaagactagg ggtttgctct aggaccttat ggccctgcct cctttctggc 2820
ctctcacagg acattttctt cccatagata gaaacagagg gagctactct caggctgcag 2880
gtaagatgaa ggaggctgat ccctgagatt gttgggatat tgtggtcagg agcctatgag 2940
ggagctcacc caccccacag ttcctctagc cacatctgtg ggctctgacc aggtcctgtt 3000
tttgttctac cccaatcact gacagtgccc agggctctgg ggtgtctctc acagctaata 3060
aaggtgacac tccagggcag gggccctgat gtgagtgggg tgttgggggg gaacagaggg 3120
gactcagctg tgctattggg tttctttgac ttggatgtct tgagcatgaa atgggctatt 3180
tagagtgtta cctctcactg tgactgatac gaatttgttc atgaatattt tctctatagt 3240
gtgagacagc ttccttgtgt gggactgaga agcaagatat caatgtagca gaattgcact 3300
tgtgcctcac gaacatacat aaattttaaa aataaagaat aaaaatatat ctttttatag 3360
atacaggtag atatgttttt atagcatgca cgtaaatgtg tgtgtgtgtg tgtgtgtgaa 3420
gagaaagagt gaatagagag attaagattc ttttaatggt gaaaagatat acatatattt 3480
ggaactagcc agcttgactc agtttaggtg atcccaattt tggtggcaac aaccaaagca 3540
tcgtag 3546
//