Dbfetch
ID MH269359; SV 1; linear; genomic DNA; STD; HUM; 3037 BP. XX AC MH269359; XX DT 11-FEB-2019 (Rel. 139, Created) DT 11-FEB-2019 (Rel. 139, Last updated, Version 1) XX DE Homo sapiens MHC class I protein (HLA-C) gene, HLA-C*07:01:01New7 allele, DE complete cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3037 RA Balz V., Krause S., Enczmann J.; RT "New HLA class 1 alleles"; RL Unpublished. XX RN [2] RP 1-3037 RA Balz V., Krause S., Enczmann J.; RT ; RL Submitted (27-APR-2018) to the INSDC. RL University Hospital Duesseldorf, Institute for Transplantation Diagnostics RL and Cell Therapeutics, Medical Faculty, Moorenstr. 5, Duesseldorf, NRW RL 40225, Germany XX DR MD5; ea535f6382d27d677181be00b37f1dd3. XX CC ##Assembly-Data-START## CC Assembly Method :: NGSengine v. 2.9.0 CC Sequencing Technology :: Illumina CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..3037 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene 1..3037 FT /gene="HLA-C" FT /allele="HLA-C*07:01:01New7" FT mRNA join(1..170,300..569,820..1095,1683..1958,2083..2202, FT 2643..2675,2783..2830,2995..3037) FT /gene="HLA-C" FT /allele="HLA-C*07:01:01New7" FT /product="MHC class I protein" FT exon 1..170 FT /gene="HLA-C" FT /allele="HLA-C*07:01:01New7" FT /number=1 FT 5'UTR 1..97 FT /gene="HLA-C" FT /allele="HLA-C*07:01:01New7" FT CDS join(98..170,300..569,820..1095,1683..1958,2083..2202, FT 2643..2675,2783..2830,2995..2999) FT /codon_start=1 FT /gene="HLA-C" FT /allele="HLA-C*07:01:01New7" FT /product="MHC class I protein" FT /db_xref="GOA:O19617" FT /db_xref="HGNC:HGNC:4933" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:O19617" FT /protein_id="QAX33619.1" FT /translation="MRVMAPRALLLLLSGGLALTETWACSHSMRYFDTAVSRPGRGEPR FT FISVGYVDDTQFVRFDSDAASPRGEPRAPWVEQEGPEYWDRETQNYKRQAQADRVSLRN FT LRGYYNQSEDGSHTLQRMYGCDLGPDGRLLRGYDQSAYDGKDYIALNEDLRSWTAADTA FT AQITQRKLEAARAAEQLRAYLEGTCVEWLRRYLENGKETLQRAEPPKTHVTHHPLSDHE FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGQEQRY FT TCHMQHEGLQEPLTLSWEPSSQPTIPIMGIVAGLAVLVVLAVLGAVVTAMMCRRKSSGG FT KGGSCSQAACSNSAQGSDESLITCKA" FT intron 171..299 FT /gene="HLA-C" FT /allele="HLA-C*07:01:01New7" FT /number=1 FT exon 300..569 FT /gene="HLA-C" FT /allele="HLA-C*07:01:01New7" FT /number=2 FT intron 570..819 FT /gene="HLA-C" FT /allele="HLA-C*07:01:01New7" FT /number=2 FT exon 820..1095 FT /gene="HLA-C" FT /allele="HLA-C*07:01:01New7" FT /number=3 FT intron 1096..1682 FT /gene="HLA-C" FT /allele="HLA-C*07:01:01New7" FT /number=3 FT exon 1683..1958 FT /gene="HLA-C" FT /allele="HLA-C*07:01:01New7" FT /number=4 FT intron 1959..2082 FT /gene="HLA-C" FT /allele="HLA-C*07:01:01New7" FT /number=4 FT exon 2083..2202 FT /gene="HLA-C" FT /allele="HLA-C*07:01:01New7" FT /number=5 FT intron 2203..2642 FT /gene="HLA-C" FT /allele="HLA-C*07:01:01New7" FT /number=5 FT exon 2643..2675 FT /gene="HLA-C" FT /allele="HLA-C*07:01:01New7" FT /number=6 FT intron 2676..2782 FT /gene="HLA-C" FT /allele="HLA-C*07:01:01New7" FT /number=6 FT exon 2783..2830 FT /gene="HLA-C" FT /allele="HLA-C*07:01:01New7" FT /number=7 FT intron 2831..2994 FT /gene="HLA-C" FT /allele="HLA-C*07:01:01New7" FT /number=7 FT exon 2995..3037 FT /gene="HLA-C" FT /allele="HLA-C*07:01:01New7" FT /number=8 FT 3'UTR 3000..3037 FT /gene="HLA-C" FT /allele="HLA-C*07:01:01New7" XX SQ Sequence 3037 BP; 568 A; 888 C; 961 G; 620 T; 0 other; ggtgtcgggt tctagagaag ccaatcagcg tctccgcagt cccggttcta aagtccccag 60 tcacccaccc ggactcacat tctccccaga ggccgagatg cgggtcatgg cgccccgagc 120 cctcctcctg ctgctctcgg gaggcctggc cctgaccgag acctgggcct gtgagtgcgg 180 ggttgggagg gaagcggcct ctgcggagag gagcgagggg cccgcccggc gagggcgcag 240 gacccgggga gccgcgcagg gaggtgggtc gggcgggtct cagccctcct cgcccccagg 300 ctcccactcc atgaggtatt tcgacaccgc cgtgtcccgg cccggccgcg gagagccccg 360 cttcatctca gtgggctacg tggacgacac gcagttcgtg cggttcgaca gcgacgccgc 420 gagtccgaga ggggagccgc gggcgccgtg ggtggagcag gaggggccgg agtattggga 480 ccgggagaca cagaactaca agcgccaggc acaggctgac cgagtgagcc tgcggaacct 540 gcgcggctac tacaaccaga gcgaggacgg tgagtgaccc cggcccgggg cgcaggtcac 600 gacccctccc catcccccac ggacggcccg ggtcgccccg agtctccccg tctgagatcc 660 accccaaggt ggatctgcgg aacccgccca gaccctcgac cggagagagc cccagtcgcc 720 tttacccggt ttcattttcg gtttaggcca aaatccccgc gggttggtcg gggcggggcg 780 gggctcgggg gactgggctg accgcggggg cggggccagg gtctcacacc ctccagagga 840 tgtatggctg cgacctgggg cccgacgggc gcctcctccg cgggtatgac cagtccgcct 900 acgacggcaa ggattacatc gccctgaacg aggacctgcg ctcctggacc gccgcggaca 960 ccgcggctca gatcacccag cgcaagttgg aggcggcccg tgcggcggag cagctgagag 1020 cctacctgga gggcacgtgc gtggagtggc tccgcagata cctggagaac gggaaggaga 1080 cgctgcagcg cgcaggtacc aggggcagtg gggagccttc cccatctcct atagatctcc 1140 cgggatggcc tcccacgagg aggggaggaa aatgggatca gcactggaat atcgccctcc 1200 cttgaatgga gaatggcatg agttttcctg agtttcctct gagggccccc tctgctctct 1260 aggacaatta agggatgaag tctctgagga aatggagggg aagacagtcc ctggaatact 1320 gatcaggggt ctcctttgac cactttgacc actgcagcag ctgtggtcag gctgctgacc 1380 tttctctcag gccttgttct ctgcctcaca ctcaatgtgt ctgaaggttt gattccagct 1440 tttctgagtc ctgcagcctc cactcaggtc aggaccagaa gtcgctgttc ctccctcaga 1500 gactagaact ttccaatgaa taggagatta tcccaggtgc ctgtgtccag gctggcgtct 1560 gggttctgtg ccgccttccc caccccaggt gtcctgtcca ttctcaggat ggtcacatgg 1620 gcgctgctgg agtgtcccaa gagagatgca aagtgtctga attttctgac tcttcccgtc 1680 agaaccccca aagacacacg tgacccacca ccccctctct gaccatgagg ccaccctgag 1740 gtgctgggcc ctgggcttct accctgcgga gatcacactg acctggcagc gggatgggga 1800 ggaccagacc caggacaccg agcttgtgga gaccaggcca gcaggagatg gaaccttcca 1860 gaagtgggca gctgtggtgg tgccttctgg acaagagcag agatacacgt gccatatgca 1920 gcacgagggg ctgcaagagc ccctcaccct gagctggggt aaggagggga atggggggtc 1980 acatctctta tcagagaaag cagaagtcct tctggagccc ttcagccggg tcagggctga 2040 ggcttggggg tcagggcccc tcaccttctc ctcctttccc agagccatct tcccagccca 2100 ccatccccat catgggcatc gttgctggcc tggctgtcct ggttgtccta gctgtccttg 2160 gagctgtggt caccgctatg atgtgtagga ggaagagctc aggtagggaa ggggtgaaga 2220 gcggggtctg ggttttcttg tcccactggg agtttcaagc cccaggtaga agtgtgcccc 2280 gccttgttac tggaagcacc atccacacat gggccatccc agcctgggac cctgtgtgcc 2340 agcacttact cttttgtgaa gcacatgtga caatgaagga cggatgtatc accttgatga 2400 ttatggtgtt ggggtcctga ttccagcatt catgagtcag gggaaggtcc ctgctaagga 2460 cagaccttag gagggcagtt ggtccagaac ccacaactgc tttccccatg tttcctgatc 2520 ctgccctggg tctgcagtcg tagttctgga aacttctctt gggtccaaga ctaggaggtt 2580 cccctaagat cacatggccc tgcctcctcc cagtcccctc atagggcatt ttcttcccac 2640 aggtggaaaa ggagggagct gctctcaggc tgcgtgtaag tgatggcggc gggcgtgtgg 2700 aggagctcac ctactccata attcctcttg tcccacatct cctgcgggct ctgaccaggt 2760 cttttttttt gttctacccc aggcagcaac agtgcccagg gctctgatga gtctctcatc 2820 acttgtaaag gtgagattct ggggagctga agtggtcggg ggtggggcag agggaaaagg 2880 cctgggtaat ggggattctt tgattgggac gtttcgagtg tgtggtgggc cgttcagagt 2940 gtcatcactt accatgactg acctgaattt gttcatgact attgtgttct gtagcctgag 3000 acagctgcct gtgtgggact gagatgcagg atttctt 3037 //