Dbfetch
ID MG680150; SV 1; linear; genomic DNA; STD; HUM; 2981 BP.
XX
AC MG680150;
XX
DT 01-FEB-2018 (Rel. 135, Created)
DT 08-MAR-2018 (Rel. 136, Last updated, Version 2)
XX
DE Homo sapiens isolate NT01873 MHC class I antigen (HLA-B) gene,
DE HLA-B*40:01:07 allele, complete cds.
XX
KW .
XX
OS Homo sapiens (human)
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
XX
RN [1]
RC Publication Status: Available-Online prior to print DOI: 10.1111/iji.12357
RP 1-2981
RX DOI; .1111/iji.12357.
RX PUBMED; 29405566.
RA Marsh S.G.;
RT "Nomenclature for factors of the HLA system, update December 2017";
RL Int. J. Immunogenet. 45(2):88-93(2018).
XX
RN [2]
RP 1-2981
RA Lazaro A.M., Hou L., Enriquez E., Persaud M., Hurley C.K.;
RT "Novel HLA Class I alleles";
RL Unpublished.
XX
RN [3]
RP 1-2981
RA Lazaro A.M., Hou L., Enriquez E., Persaud M., Hurley C.K.;
RT ;
RL Submitted (14-DEC-2017) to the INSDC.
RL Oncology, C.W.Bill Young DoD Marrow Donor Recruitment and Research Program,
RL 11333 Woodglen Dr, Rockville, MD 20852, United States of America
XX
DR MD5; 1110026e41fe48dc81b99c3c4ddec425.
XX
FH Key Location/Qualifiers
FH
FT source 1..2981
FT /organism="Homo sapiens"
FT /chromosome="6"
FT /isolate="NT01873"
FT /mol_type="genomic DNA"
FT /db_xref="taxon:9606"
FT gene <276..>2951
FT /gene="HLA-B"
FT /allele="HLA-B*40:01:07"
FT mRNA join(<276..348,477..746,992..1267,1842..2117,2211..2327,
FT 2769..2801,2908..>2951)
FT /gene="HLA-B"
FT /allele="HLA-B*40:01:07"
FT /product="MHC class I antigen"
FT CDS join(276..348,477..746,992..1267,1842..2117,2211..2327,
FT 2769..2801,2908..2951)
FT /codon_start=1
FT /gene="HLA-B"
FT /allele="HLA-B*40:01:07"
FT /product="MHC class I antigen"
FT /db_xref="GOA:C6K6H8"
FT /db_xref="InterPro:IPR001039"
FT /db_xref="InterPro:IPR003006"
FT /db_xref="InterPro:IPR003597"
FT /db_xref="InterPro:IPR007110"
FT /db_xref="InterPro:IPR010579"
FT /db_xref="InterPro:IPR011161"
FT /db_xref="InterPro:IPR011162"
FT /db_xref="InterPro:IPR013783"
FT /db_xref="InterPro:IPR036179"
FT /db_xref="InterPro:IPR037055"
FT /db_xref="UniProtKB/TrEMBL:C6K6H8"
FT /protein_id="AUT12111.1"
FT /translation="MRVTAPRTVLLLLSAALALTETWAGSHSMRYFHTAMSRPGRGEPR
FT FITVGYVDDTLFVRFDSDATSPRKEPRAPWIEQEGPEYWDRETQISKTNTQTYRESLRN
FT LRGYYNQSEAGSHTLQRMYGCDVGPDGRLLRGHNQYAYDGKDYIALNEDLRSWTAADTA
FT AQISQRKLEAARVAEQLRAYLEGECVEWLRRYLENGKDKLERADPPKTHVTHHPISDHE
FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRY
FT TCHVQHEGLPKPLTLRWEPSSQSTVPIVGIVAGLAVLAVVVIGAVVAAVMCRRKSSGGK
FT GGSYSQAACSDSAQGSDVSLTA"
XX
SQ Sequence 2981 BP; 554 A; 893 C; 936 G; 598 T; 0 other;
gaagtcccag gccccgggcg gggctctcag ggtctcaggc tccgagggcc gcgtctgcaa 60
tggggaggcg cagcgttggg gattccccac tcccacgagt ttcacttctt ctcccaacct 120
atgtcgggtc cttcttccag gatactcgtg acgcgtcccc atttcccact cccattgggt 180
gtcgggtgtc tagagaagcc aatcagcgtc gccgtggtcc cagttctaaa gtccccacgc 240
acccacccgg actcagaatc tcctcagacg ccgagatgcg ggtcacggca ccccgaaccg 300
tcctcctgct gctctcggcg gccctggccc tgaccgagac ctgggccggt gagtgcgggt 360
cggcagggaa atggcctctg tggggaggag cgaggggacc gcaggcgggg gcgcaggacc 420
cggggagccg cgccgggagg agggtcgggc gggtctcagc tcctcctcgc ccccaggctc 480
ccactccatg aggtatttcc acaccgccat gtcccggccc ggccgcgggg agccccgctt 540
catcaccgtg ggctacgtgg acgacacgct gttcgtgagg ttcgacagcg acgccacgag 600
tccgaggaag gagccgcggg cgccatggat agagcaggag gggccggagt attgggaccg 660
ggagacacag atctccaaga ccaacacaca gacttaccga gagagcctgc ggaacctgcg 720
cggctactac aaccagagcg aggccggtga gtgaccccgg cccggggcgc aggtcacgac 780
tccccatccc ccacgtacgg cccgggtcgc cccgagtctc cgggtccgag atccgacccc 840
ctgaggccgc gggacccgcc cagaccctcg accggcgaga gccccaggcg cgtttacccg 900
gtttcatttt cagttgaggc caaaatcccc gcgggttggt cggggcgggg cggggctcgg 960
gggactgggc tgaccgcggg gccggggcca gggtctcaca ccctccagag gatgtacggc 1020
tgcgacgtgg ggccggacgg gcgcctcctc cgcgggcata accagtacgc ctacgacggc 1080
aaggattaca tcgccctgaa cgaggacctg cgctcctgga ccgccgcgga cacggcggct 1140
cagatctccc aacgcaagtt ggaggcggcc cgtgtggcgg agcagctgag agcctacctg 1200
gagggcgagt gcgtggagtg gctccgcaga tacctggaga acgggaagga caagctggag 1260
cgcgctggta ccaggggcag tggggagcct tccccatctc ctataggtcg ccggggatgg 1320
cctcccacga gaagaggagg aaaatgggat cagcgctaga atgtcgccct ccgttgaatg 1380
gagaatggca tgagttttcc tgagtttcct ctgagggccc cctcttctct ctagacaatt 1440
aaggaatgac gtctctgagg aaatggaggg gaagacagtc cctagaatac tgatcagggg 1500
tcccctttga cccctgcagc agccttggga accgtgactt ttcctctcag gccttgttct 1560
ctgcctcaca ctcagtgtgt ttggggctct gattccagca cttctgagtc actttacctc 1620
cactcagatc aggagcagaa gtccctgttc cccgctcaga gactcgaact ttccaatgaa 1680
taggagatta tcccaggtgc ctgcgtccag gctggtgtct gggttctgtg ccccttcccc 1740
accccaggtg tcctgtccat tctcaggctg gtcacatggg tggtcctagg gtgtcccatg 1800
aaagatgcaa agcgcctgaa ttttctgact cttcccatca gaccccccaa agacacacgt 1860
gacccaccac cccatctctg accatgaggc caccctgagg tgctgggccc tgggtttcta 1920
ccctgcggag atcacactga cctggcagcg ggatggcgag gaccaaactc aggacactga 1980
gcttgtggag accagaccag caggagatag aaccttccag aagtgggcag ctgtggtggt 2040
gccttctgga gaagagcaga gatacacatg ccatgtacag catgaggggc tgccgaagcc 2100
cctcaccctg agatggggta aggaggggga tgaggggtca tatctcttct cagggaaagc 2160
aggagccctt cagcagggtc agggcccctc atcttcccct cctttcccag agccgtcttc 2220
ccagtccacc gtccccatcg tgggcattgt tgctggcctg gctgtcctag cagttgtggt 2280
catcggagct gtggtcgctg ctgtgatgtg taggaggaag agttcaggta gggaaggggt 2340
gaggggtggg gtctgggttt tcttgtccca ctgggggttt caagccccag gtagaagtgt 2400
tccctgcctc attactggga agcagcatgc acacaggggc taacgcagcc tgggaccctg 2460
tgtgccagca cttactcttt tgtgcagcac atgtgacaat gaaggatgga tgtatcacct 2520
tgatggttgt ggtgttgggg tcctgattcc agcattcatg agtcagggga aggtccctgc 2580
taaggacaga ccttaggagg gcagttggtc caggacccac acttgctttc ctcgtgtttc 2640
ctgatcctgc cctgggtctg tagtcatact tctggaaatt ccttttgggt ccaagactag 2700
gaggttcctc taagatctca tggccctgct tcctcccagt gccctcacag gacattttct 2760
tcccacaggt ggaaaaggag ggagctactc tcaggctgcg tgtaagtggt gggggtggga 2820
gtgtggagga gctcacccac cccataattc ctcctgtccc acgtctcctg cgggctctga 2880
ccaggtcctg tttttgttct actccaggca gcgacagtgc ccagggctct gatgtgtctc 2940
tcacagcttg aaaaggtgag attcttgggg tctagagtgg g 2981
//