Dbfetch
ID LT986548; SV 1; linear; genomic DNA; STD; HUM; 3503 BP.
XX
AC LT986548;
XX
PR Project:PRJEB25250;
XX
DT 15-MAR-2018 (Rel. 136, Created)
DT 15-MAR-2018 (Rel. 136, Last updated, Version 6)
XX
DE Homo sapiens, HLA-A gene for MHC class I antigen, cell line
DE DKMS-LSL-A-2382, allele HLA-A*01:new
XX
KW .
XX
OS Homo sapiens (human)
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
XX
RN [1]
RA Albrecht V., Albrecht V., Boehme I.;
RT ;
RL Submitted (05-MAR-2018) to the INSDC.
RL DKMS LIFE SCIENCE LAB, Quality & Service, Advanced Projects, Tatzberg 47 ,
RL Saxony, 01307 Dresden, Germany
XX
DR MD5; 2e5c3b5f96e8c68955dcdea43117d877.
DR Ensembl-Gn; ENSG00000224320; homo_sapiens.
DR Ensembl-Gn; ENSG00000229215; homo_sapiens.
DR Ensembl-Tr; ENST00000431930; homo_sapiens.
DR Ensembl-Tr; ENST00000443552; homo_sapiens.
DR Ensembl-Tr; ENST00000549869; homo_sapiens.
DR Ensembl-Tr; ENST00000552193; homo_sapiens.
XX
FH Key Location/Qualifiers
FH
FT source 1..3503
FT /organism="Homo sapiens"
FT /mol_type="genomic DNA"
FT /cell_line="DKMS-LSL-A-2382"
FT /db_xref="taxon:9606"
FT exon 1..373
FT /gene="HLA-A"
FT /allele="HLA-A*01:new"
FT /number=1
FT CDS join(301..373,504..773,1015..1290,1870..2145,2248..2364,
FT 2807..2839,2982..3029,3199..3203)
FT /codon_start=1
FT /transl_table=1
FT /gene="HLA-A"
FT /allele="HLA-A*01:new"
FT /product="MHC class I antigen"
FT /function="antigen presenting molecule"
FT /db_xref="GOA:Q5SUL5"
FT /db_xref="InterPro:IPR001039"
FT /db_xref="InterPro:IPR003006"
FT /db_xref="InterPro:IPR003597"
FT /db_xref="InterPro:IPR007110"
FT /db_xref="InterPro:IPR010579"
FT /db_xref="InterPro:IPR011161"
FT /db_xref="InterPro:IPR011162"
FT /db_xref="InterPro:IPR013783"
FT /db_xref="InterPro:IPR036179"
FT /db_xref="InterPro:IPR037055"
FT /db_xref="UniProtKB/TrEMBL:Q5SUL5"
FT /protein_id="SPF82221.1"
FT /translation="MAVMAPRTLLLLLSGALALTQTWAGSHSMRYFFTSVSRPGRGEPR
FT FIAVGYVDDTQFVRFDSDAASQKMEPRAPWIEQEGPEYWDQETRNMKAHSQTDRANLGT
FT LRGYYNQSEDGSHTIQIMYGCDVGPDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMA
FT AQITKRKWEAVHAAEQRRVYLEGRCVDGLRRYLENGKETLQRTDPPKTHMTHHPISDHE
FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRY
FT TCHVQHEGLPKPLTLRWELSSQPTIPIVGIIAGLVLLGAVITGAVVAAVMWRRKSSDRK
FT GGSYTQAASSDSAQGSDVSLTACKV"
FT intron 374..503
FT /gene="HLA-A"
FT /allele="HLA-A*01:new"
FT /number=1
FT exon 504..773
FT /gene="HLA-A"
FT /allele="HLA-A*01:new"
FT /number=2
FT intron 774..1014
FT /gene="HLA-A"
FT /allele="HLA-A*01:new"
FT /number=2
FT exon 1015..1290
FT /gene="HLA-A"
FT /allele="HLA-A*01:new"
FT /number=3
FT intron 1291..1869
FT /gene="HLA-A"
FT /allele="HLA-A*01:new"
FT /number=3
FT exon 1870..2145
FT /gene="HLA-A"
FT /allele="HLA-A*01:new"
FT /number=4
FT intron 2146..2247
FT /gene="HLA-A"
FT /allele="HLA-A*01:new"
FT /number=4
FT exon 2248..2364
FT /gene="HLA-A"
FT /allele="HLA-A*01:new"
FT /number=5
FT intron 2365..2806
FT /gene="HLA-A"
FT /allele="HLA-A*01:new"
FT /number=5
FT exon 2807..2839
FT /gene="HLA-A"
FT /allele="HLA-A*01:new"
FT /number=6
FT intron 2840..2981
FT /gene="HLA-A"
FT /allele="HLA-A*01:new"
FT /number=6
FT exon 2982..3029
FT /gene="HLA-A"
FT /allele="HLA-A*01:new"
FT /number=7
FT intron 3030..3198
FT /gene="HLA-A"
FT /allele="HLA-A*01:new"
FT /number=7
FT exon 3199..3503
FT /gene="HLA-A"
FT /allele="HLA-A*01:new"
FT /number=8
XX
SQ Sequence 3503 BP; 666 A; 1011 C; 1070 G; 756 T; 0 other;
caggagcaga ggggtcaggg cgaagtccca gggccccagg cgtggctctc agggtctcag 60
gccccgaagg cggtgtatgg attggggagt cccagccttg gggattcccc aactccgcag 120
tttcttttct ccctctccca acctacgtag ggtccttcat cctggatact cacgacgcgg 180
acccagttct cactcccatt gggtgtcggg tttccagaga agccaatcag tgtcgtcgcg 240
gtcgctgttc taaagtccgc acgcacccac cgggactcag attctcccca gacgccgagg 300
atggccgtca tggcgccccg aaccctcctc ctgctactct cgggggccct ggccctgacc 360
cagacctggg cgggtgagtg cggggtcggg agggaaaccg cctctgcggg gagaagcaag 420
gggccctcct ggcgggggcg caggaccggg ggagccgcgc cgggaggagg gtcgggcagg 480
tctcagccac tgctcgcccc caggctccca ctccatgagg tatttcttca catccgtgtc 540
ccggcccggc cgcggggagc cccgcttcat cgccgtgggc tacgtggacg acacgcagtt 600
cgtgcggttc gacagcgacg ccgcgagcca gaagatggag ccgcgggcgc cgtggataga 660
gcaggagggg ccggagtatt gggaccagga gacacggaat atgaaggccc actcacagac 720
tgaccgagcg aacctgggga ccctgcgcgg ctactacaac cagagcgagg acggtgagtg 780
accccggccc ggggcgcagg tcacgacccc tcatccccca cggacgggcc aggtcgccca 840
cagtctccgg gtccgagatc caccccgaag ccgcgggact ccgagaccct tgtcccggga 900
gaggcccagg cgcctttacc cggtttcatt ttcagtttag gccaaaaatc cccccgggtt 960
ggtcggggcg gggcggggct cgggggactg ggctgaccgc ggggtcgggg ccaggttctc 1020
acaccatcca gataatgtat ggctgcgacg tggggccgga cgggcgcttc ctccgcgggt 1080
accggcagga cgcctatgac ggcaaggatt acatcgccct gaacgaggac ctgcgctctt 1140
ggaccgcggc ggacatggca gctcagatca ccaagcgcaa gtgggaggcg gtccatgcgg 1200
cggagcagcg gagagtctac ctggagggcc ggtgcgtgga cgggctccgc agatacctgg 1260
agaacgggaa ggagacgctg cagcgcacgg gtaccagggg ccacggggcg cctccctgat 1320
cgcctataga tctcccgggc tggcctccca caaggagggg agacaattgg gaccaacact 1380
agaatatcac cctccctctg gtcctgaggg agaggaatcc tcctgggttt ccagatcctg 1440
taccagagag tgactctgag gttccgccct gctctctgac acaattaagg gataaaatct 1500
ctgaaggagt gacgggaaga cgatccctcg aatactgatg agtggttccc tttgacaccg 1560
gcagcagcct tgggcccgtg acttttcctc tcaggccttg ttctctgctt cacactcaat 1620
gtgtgtgggg gtctgagtcc agcacttctg agtctctcag cctccactca ggtcaggacc 1680
agaagtcgct gttcccttct cagggaatag aagattatcc caggtgcctg tgtccaggct 1740
ggtgtctggg ttctgtgctc tcttccccat cccgggtgtc ctgtccattc tcaagatggc 1800
cacatgcgtg ctggtggagt gtcccatgac agatgcaaaa tgcctgaatt ttctgactct 1860
tcccgtcaga cccccccaag acacatatga cccaccaccc catctctgac catgaggcca 1920
ccctgaggtg ctgggccctg ggcttctacc ctgcggagat cacactgacc tggcagcggg 1980
atggggagga ccagacccag gacacggagc tcgtggagac caggcctgca ggggatggaa 2040
ccttccagaa gtgggcggct gtggtggtgc cttctggaga ggagcagaga tacacctgcc 2100
atgtgcagca tgagggtctg cccaagcccc tcaccctgag atggggtaag gagggagatg 2160
ggggtgtcat gtctcttagg gaaagcagga gcctctctgg agacctttag cagggtcagg 2220
gcccctcacc ttcccctctt ttcccagagc tgtcttccca gcccaccatc cccatcgtgg 2280
gcatcattgc tggcctggtt ctccttggag ctgtgatcac tggagctgtg gtcgctgccg 2340
tgatgtggag gaggaagagc tcaggtggag aaggggtgaa gggtggggtc tgagatttct 2400
tgtctcactg agggttccaa gccccagcta gaaatgtgcc ctgtctcatt actgggaagc 2460
accttccaca atcatgggcc gacccagcct gggccctgtg tgccagcact tactcttttg 2520
taaagcacct gttaaaatga aggacagatt tatcaccttg attacggcgg tgatgggacc 2580
tgatcccagc agtcacaagt cacaggggaa ggtccctgag gacagacctc aggagggcta 2640
ttggtccagg acccacacct gctttcttca tgtttcctga tcccgccctg ggtctgcagt 2700
cacacatttc tggaaacttc tctggggtcc aagactagga ggttcctcta ggaccttaag 2760
gccctggctc ctttctggta tctcacagga cattttcttc ccacagatag aaaaggaggg 2820
agttacactc aggctgcaag taagtatgaa ggaggctgat gcctgaggtc cttgggatat 2880
tgtgtttggg agcccatggg ggagctcacc caccccacaa ttcctcctct agccacatct 2940
tctgtgggat ctgaccaggt tctgtttttg ttctacccca ggcagtgaca gtgcccaggg 3000
ctctgatgtg tctctcacag cttgtaaagg tgagagcttg gagggcctga tgtgtgttgg 3060
gtgttgggtg gaacagtgga cacagctgtg ctatggggtt tctttgcgtt ggatgtattg 3120
agcatgcgat gggctgttta aggtgtgacc cctcactgtg atggatatga atttgttcat 3180
gaatattttt ttctatagtg tgagacagct gccttgtgtg ggactgagag gcaagagttg 3240
ttcctgccct tccctttgtg acttgaagaa ccctgacttt gtttctgcaa aggcacctgc 3300
atgtgtctgt gttcgtgtag gcataatgtg aggaggtggg gagagcaccc cacccccatg 3360
tccaccatga ccctcttccc acgctgacct gtgctccctc tccaatcatc tttcctgttc 3420
cagagaggtg gggctgaggt gtctccatct ctgtctcaac ttcatggtgc actgagctgt 3480
aacttcttcc ttccctatta aaa 3503
//