Dbfetch
ID LT966201; SV 1; linear; genomic DNA; STD; HUM; 3901 BP. XX AC LT966201; XX PR Project:PRJEB23834; XX DT 10-JAN-2018 (Rel. 135, Created) DT 18-FEB-2018 (Rel. 135, Last updated, Version 2) XX DE Homo sapiens, HLA-C pseudogene, cell line DKMS-LSL-C-1999, null allele DE HLA-C*08:new XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RA Albrecht V., Albrecht V., Boehme I.; RT ; RL Submitted (11-DEC-2017) to the INSDC. RL DKMS LIFE SCIENCE LAB, Quality & Service, Advanced Projects, Tatzberg 47 , RL Saxony, 01307 Dresden, Germany XX DR MD5; 2aa2f9199d22df6100b909d971857398. XX FH Key Location/Qualifiers FH FT source 1..3901 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /cell_line="DKMS-LSL-C-1999" FT /db_xref="taxon:9606" FT exon 1..568 FT /gene="HLA-C" FT /allele="HLA-C*08:new" FT /number=1 FT CDS join(496..568,699..968,1215..1488,2076..2351,2473..2592, FT 3032..3064,3172..3219,3384..3388) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-C" FT /allele="HLA-C*08:new" FT /note="MHC class I antigen null allele" FT /pseudogene="allelic" FT intron 569..698 FT /gene="HLA-C" FT /allele="HLA-C*08:new" FT /number=1 FT exon 699..968 FT /gene="HLA-C" FT /allele="HLA-C*08:new" FT /number=2 FT intron 969..1214 FT /gene="HLA-C" FT /allele="HLA-C*08:new" FT /number=2 FT exon 1215..1488 FT /gene="HLA-C" FT /allele="HLA-C*08:new" FT /number=3 FT intron 1489..2075 FT /gene="HLA-C" FT /allele="HLA-C*08:new" FT /number=3 FT exon 2076..2351 FT /gene="HLA-C" FT /allele="HLA-C*08:new" FT /number=4 FT intron 2352..2472 FT /gene="HLA-C" FT /allele="HLA-C*08:new" FT /number=4 FT exon 2473..2592 FT /gene="HLA-C" FT /allele="HLA-C*08:new" FT /number=5 FT intron 2593..3031 FT /gene="HLA-C" FT /allele="HLA-C*08:new" FT /number=5 FT exon 3032..3064 FT /gene="HLA-C" FT /allele="HLA-C*08:new" FT /number=6 FT intron 3065..3171 FT /gene="HLA-C" FT /allele="HLA-C*08:new" FT /number=6 FT exon 3172..3219 FT /gene="HLA-C" FT /allele="HLA-C*08:new" FT /number=7 FT intron 3220..3383 FT /gene="HLA-C" FT /allele="HLA-C*08:new" FT /number=7 FT exon 3384..3901 FT /gene="HLA-C" FT /allele="HLA-C*08:new" FT /number=8 XX SQ Sequence 3901 BP; 761 A; 1087 C; 1206 G; 847 T; 0 other; ttattttgct ggatgtagtt taatattacc tgaggtaagg taaggcaaag agtgggaggc 60 agggagtcca gttcagggac ggggattcca ggagaagtga aggggaaggg gctgggcgca 120 gcctgggggt ctctccctgg tttccacaga cagatccttg gccaggactc aggcacacag 180 tgtgacaaag atgcttggtg taggagaaga gggatcagga cgaagtccca ggtcccgggc 240 ggggctctca gggtctcagg ctccaagggc cgtgtctgca ctggggaggc gccgcgttga 300 ggattctcca ctcccctgag tttcacttct tcttccaacc tgcgtcgggt ccttcttcct 360 gaatactcat gacgcgtccc caattcccac tcccattggg tgtcgggttc tagagaagcc 420 aatcagcgtc tccgcagtcc cggttctaaa gtccccagtc acccacccgg actcggattc 480 tccccagacg ccgagatgcg ggtcatggcg ccccgaaccc tcatcctgct gctctcggga 540 gccctggccc tgaccgagac ctgggcctgt gagtgcgagg ttgggaggga aacggcctct 600 gcggagagga gcgaggggcc cgcccggcga gggcgcagga cccggggagc cgcgcaggga 660 ggagggtcgg gcgggtctca gcccctcctc gcccccaggc tcccactcca tgaggtattt 720 ctacaccgcc gtgtcccggc ccggccgcgg agagccccgc ttcatcgcag tgggctacgt 780 ggacgacacg cagttcgtgc agttcgacag cgacgccgcg agtccaagag gggagccgcg 840 ggcgccgtgg gtggagcagg aggggccgga gtattgggac cgggagacac agaagtacaa 900 gcgccaggca cagactgacc gagtgagcct gcggaacctg cgcggctact acaaccagag 960 cgaggccggt gagtgacccc ggcccggggc gcaggtcacg acccctcccc atcccccacg 1020 gacggcccgg gtcgccccga gtctcccggt ctgagatcca ccccgaggct gcggaacccg 1080 cccagaccct cgaccggaga gagccccagt cacctttacc cggtttcatt ttcagtttag 1140 gccaaaatcc ccgcgggttg gtcggggctg gggcggggct cgggggacgg ggctgaccac 1200 gggggcgggg ccagggtctc accctccaga ggatgtatgg ctgcgacctg gggcccgacg 1260 ggcgcctcct ccgcgggtat aaccagttcg cctacgacgg caaggattac atcgccctga 1320 atgaggacct gcgctcctgg accgccgcgg acaaggcggc tcagatcacc cagcgcaagt 1380 gggaggcggc ccgtgaggcg gagcagcgga gagcctacct ggagggcacg tgcgtggagt 1440 ggctccgcag atacctggag aacgggaaga agacgctgca gcgcgcgggt accaggggca 1500 gtggggagcc ttccccatct cctgtagatc tcccgggatg gcctcccacg aggaggggag 1560 gaaaatggga tcagcgctgg aatatcgccc tcccttgaat ggagaatggg atgagttttc 1620 ctgagtttct tctgagggcc ccctctgctc tctaggacaa ttaagggatg aagtccttga 1680 ggaaatggag gggaagacag tccctggaat actgatcagg ggtccccttt gaccactttg 1740 accactgcag cagctgtggt caggctgctg acctttctct caggccttgt tctctgcctc 1800 acgctcaatg tgtttaaagg tttgattcca gcttttctga gtccttcggc ctccactcag 1860 gtcaggacca gaagtcgctg ttcctccctc agagactaga actttccaat gaataggaga 1920 ttatcccagg tgcctgtgtc caggctggcg tctgggttct gtgccccctt ccccacccca 1980 ggtgtcctgt ccattctcag gatggtcaca tgggcactgt tggagtgtcg caagagagat 2040 acaaagtgtc tgaattttct gactcttccc gtcagaacac ccaaagacac acgtgaccca 2100 ccatcccgtc tctgaccatg aggccaccct gaggtgctgg gccctgggct tctaccctgc 2160 ggagatcaca ctgacctggc agcgggatgg cgaggaccaa actcaggaca ccgagcttgt 2220 ggagaccagg ccagcaggag atggaacctt ccagaagtgg gcagctgtgg tggtgccttc 2280 tggagaagag cagagataca cgtgccatgt gcagcacgag gggctgccag agcccctcac 2340 cctgagatgg ggtaaggagg gggatgaggg gtcatgtgtc ttctcaggga aagcagaagt 2400 cctggagccc ttcagccggg tcagggctga ggcttggggg tcagggcccc tcaccttccc 2460 ctcctttccc agggccatct tcccagccca ccatccccat cgtgggcatc gttgctggcc 2520 tggctgtcct ggctgtccta gctgtcctag gagctgtgat ggctgttgtg atgtgtagga 2580 ggaagagctc aggtagggaa ggggtgagga gtggggtctg ggttttcttg tcccactggg 2640 agtttcaagc cccaggtaga agtgtgcccc acctcgttac tggaagcacc atccacacat 2700 gggccatccc agcctgggac cctgtgtgct agcacttact ctgttgtgaa gcacatgaca 2760 atgaaggaca gatgtatcac cttgatgatt atggtgttgg ggtccttgat tccagcattc 2820 atgagtcagg ggaaggtccc tgctaaggac agaccttagg agggcagttg ctccagaacc 2880 cacagctgct ttccccgtgt ttcctgatcc tgccctgggt ctgcagtcat agttctggaa 2940 acttctcttg ggtccaagac taggaggttc ccctaagatc gcatggccct gcctcctccc 3000 tgtcccctca cagggcattt tcttcccaca ggtggaaaag gagggagctg ctctcaggct 3060 gcgtgtaagt gatggcggtg ggcgtgtgga ggagctcacc caccccataa ttcctcttgt 3120 cccacatctc ctgcgggctc tgaccaggtc tttttttttg ttctacccca gccagcaaca 3180 gtgcccaggg ctctgatgag tctctcatcg cttgtaaagg tgagattctg gggagctgaa 3240 gtggtcgggg gtggggcaga gggaaaaggc ctaggtaatg gggatccttt gattgggacg 3300 tttcgaatgt gtggtgagct gttcagagtg tcatcactta ccatgactga cctgaatttg 3360 ttcatgacta ttgtgttctg tagcctgaga cagctgcctg tgtgggactg agatgcagga 3420 tttcttcaca cctttccttt gtgacttcaa gagcctctgg catctctttc tgcaaaggca 3480 tctgaatgtg tctgcgttcc tgttagcata atgtgaggag gtggagagac agcccacccc 3540 cgtgtccacc gtgacccctg tccccacact gacctgtgtt ccctccccga tcatctttcc 3600 tgttccagag aagtgggctg gatgtctcca tctctgtctc aactttacgt gtactgagct 3660 gcaacttctt acttccctac tgaaaataag aatctgaata taaatttgtt ttctcaaata 3720 tttgctatga gaggttgatg gattaattaa ataagtcaat tcctggaagt tgagagagca 3780 aataaagacc tgagaacctt ccagaatccg catgttcgct gtgctgagtc tgttgcaggt 3840 gggggtgggg aaggctgtga ggagacgagt gtggacgggg cctgtgccta gttgctgttc 3900 a 3901 //