Dbfetch
ID LT966113; SV 1; linear; genomic DNA; STD; HUM; 2977 BP.
XX
AC LT966113;
XX
PR Project:PRJEB23855;
XX
DT 10-JAN-2018 (Rel. 135, Created)
DT 10-JAN-2018 (Rel. 135, Last updated, Version 1)
XX
DE Homo sapiens, HLA-B gene for MHC class I antigen, cell line
DE DKMS-LSL-B-2308, allele HLA-B*49:new
XX
KW .
XX
OS Homo sapiens (human)
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
XX
RN [1]
RA Albrecht V., Albrecht V., Boehme I.;
RT ;
RL Submitted (11-DEC-2017) to the INSDC.
RL DKMS LIFE SCIENCE LAB, Quality & Service, Advanced Projects, Tatzberg 47 ,
RL Saxony, 01307 Dresden, Germany
XX
DR MD5; fb1d7aa1e1a38aa047a3cbce5f6ec536.
XX
FH Key Location/Qualifiers
FH
FT source 1..2977
FT /organism="Homo sapiens"
FT /mol_type="genomic DNA"
FT /cell_line="DKMS-LSL-B-2308"
FT /db_xref="taxon:9606"
FT exon 1..357
FT /gene="HLA-B"
FT /allele="HLA-B*49:new"
FT /number=1
FT CDS join(285..357,486..755,1006..1281,1857..2132,2237..2353,
FT 2795..2827,2934..2977)
FT /codon_start=1
FT /transl_table=1
FT /gene="HLA-B"
FT /allele="HLA-B*49:new"
FT /product="MHC class I antigen"
FT /function="antigen presenting molecule"
FT /db_xref="GOA:A0A2K4XG87"
FT /db_xref="InterPro:IPR001039"
FT /db_xref="InterPro:IPR003006"
FT /db_xref="InterPro:IPR003597"
FT /db_xref="InterPro:IPR007110"
FT /db_xref="InterPro:IPR010579"
FT /db_xref="InterPro:IPR011161"
FT /db_xref="InterPro:IPR011162"
FT /db_xref="InterPro:IPR013783"
FT /db_xref="InterPro:IPR036179"
FT /db_xref="InterPro:IPR037055"
FT /db_xref="UniProtKB/TrEMBL:A0A2K4XG87"
FT /protein_id="SOU90267.1"
FT /translation="MRVTAPRTVLLLLSAALALTETWAGSHSMRYFHTAMSRPGRGEPR
FT FITVGYVDDTLFVRFDSDATSPRKEPRAPWIEQEGPEYWDRETQISKTNTQTYRENLRI
FT ALRYYNQSEAGSHTWQRMYGCDLGPDGRLLRGYNQLAYDGKDYIALNEDLSSWTAADTA
FT AQITQRKWEAAREAEQLRAYLEGLCVEWLRRYLENGKETPQRADPPKTHVTHHPISDHE
FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRY
FT TCHVQHEGLPKPLTLRWEPSSQSTIPIVGIVAGLAVLAVVVIGAVVATVMCRRKSSGGK
FT GGSYSQAASSDSAQGSDVSLTA"
FT intron 358..485
FT /gene="HLA-B"
FT /allele="HLA-B*49:new"
FT /number=1
FT exon 486..755
FT /gene="HLA-B"
FT /allele="HLA-B*49:new"
FT /number=2
FT intron 756..1005
FT /gene="HLA-B"
FT /allele="HLA-B*49:new"
FT /number=2
FT exon 1006..1281
FT /gene="HLA-B"
FT /allele="HLA-B*49:new"
FT /number=3
FT intron 1282..1856
FT /gene="HLA-B"
FT /allele="HLA-B*49:new"
FT /number=3
FT exon 1857..2132
FT /gene="HLA-B"
FT /allele="HLA-B*49:new"
FT /number=4
FT intron 2133..2236
FT /gene="HLA-B"
FT /allele="HLA-B*49:new"
FT /number=4
FT exon 2237..2353
FT /gene="HLA-B"
FT /allele="HLA-B*49:new"
FT /number=5
FT intron 2354..2794
FT /gene="HLA-B"
FT /allele="HLA-B*49:new"
FT /number=5
FT exon 2795..2827
FT /gene="HLA-B"
FT /allele="HLA-B*49:new"
FT /number=6
FT intron 2828..2933
FT /gene="HLA-B"
FT /allele="HLA-B*49:new"
FT /number=6
FT exon 2934..2977
FT /gene="HLA-B"
FT /allele="HLA-B*49:new"
FT /number=7
XX
SQ Sequence 2977 BP; 552 A; 903 C; 930 G; 592 T; 0 other;
gatcaggacg aagtcccagg ccccgggcgg ggctctcagg gtctcaggct ccgagggccg 60
cgtctgcaat ggggaggcgc agcgttgggg attccccact cccacgagtt tcacttcttc 120
tcccaaccta tgtcgggtcc ttcttccagg atactcgtga cgcgtcccca tttcccactc 180
ccattgggtg tcgggtgtct agagaagcca atcagcgtcg ccgtggtccc agttctaaag 240
tccccacgca cccacccgga ctcagaatct cctcagacgc cgagatgcgg gtcacggcac 300
cccgaaccgt cctcctgctg ctctcggcgg ccctggccct gaccgagacc tgggccggtg 360
agtgcgggtc ggcagggaaa tggcctctgt ggggaggagc gaggggaccg caggcggggg 420
cgcaggaccc ggggagccgc gccgggagga gggtcgggcg ggtctcagcc cctcctcgcc 480
cccaggctcc cactccatga ggtatttcca caccgccatg tcccggcccg gccgcgggga 540
gccccgcttc atcaccgtgg gctacgtgga cgacacgctg ttcgtgaggt tcgacagcga 600
cgccacgagt ccgaggaagg agccgcgggc gccatggata gagcaggagg ggccggagta 660
ttgggaccgg gagacacaga tctccaagac caacacacag acttaccgag agaacctgcg 720
gatcgcgctc cgctactaca accagagcga ggccggtgag tgaccccggc ccggggcgca 780
ggtcacgact ccccatcccc cacgtacggc ccgggtcgcc ccgagtctcc gggtccgaga 840
tccgcccccc tgaggccgcg ggacccgccc agaccctcga ccggcgagag ccccaggcgc 900
gtttacccgg tttcattttc agttgaggcc aaaatccccg cgggttggtc ggggcggggc 960
ggggcggggc tcgggggacg gggctgaccg cggggcctgg gccagggtct cacacttggc 1020
agaggatgta tggctgcgac ctggggcccg acgggcgcct cctccgcggg tataaccagt 1080
tagcctacga cggcaaggat tacatcgccc tgaacgagga cctgagctcc tggaccgcgg 1140
cggacaccgc ggctcagatc acccagcgca agtgggaggc ggcccgtgag gcggagcagc 1200
tgagagccta cctggagggc ctgtgcgtgg agtggctccg cagatacctg gagaacggga 1260
aggagacgcc gcagcgcgcg ggtaccaggg gcagtgggga gccttcccca tctcctatag 1320
gtcgccgggg atggcctccc acgagaagag gaggaaaatg ggatcagcgc tagaatgtcg 1380
ccctcccttg aatggagaat ggcatgagtt ttcctgagtt tcctctgagg gccccctctt 1440
ctctctagga caattaaggg atgacgtctc tgaggaaatg gaggggaaga cagtccctag 1500
aatactgatc aggggtcccc tttgacccct gcagcagcct tgggaaccgt gacttttcct 1560
ctcaggcctt gttctctgcc tcacactcag tgtgtttggg gctctgattc cagcacttct 1620
gagtcacttt acctccactc agatcaggag cagaagtccc tgttccccac tcagagactc 1680
gaactttcca atgaatagga gattatccca ggtgcctgcg tccaggctgg tgtctgggtt 1740
ctgtgcccct tccccacccc aggtgtcctg tccattctca ggctggtcac atgggtggtc 1800
ctagggtgtc ccatgagaga tgcaaagcgc ctgaattttc tgactcttcc catcagaccc 1860
cccaaagaca catgtgaccc accaccccat ctctgaccat gaggccaccc tgaggtgctg 1920
ggccctgggc ttctaccctg cggagatcac actgacctgg cagcgggatg gcgaggacca 1980
aactcaggac accgagcttg tggagaccag accagcagga gatagaacct tccagaagtg 2040
ggcagctgtg gtggtgcctt ctggagaaga gcagagatac acatgccatg tacagcatga 2100
ggggctgccg aagcccctca ccctgagatg gggtaaggag ggggatgagg ggtcatatct 2160
gttctcaggg aaagcaggag cccttctgga gcccttcagc agggtcaggg cccctcatct 2220
tcccctcctt tcccagagcc atcttcccag tccaccatcc ccatcgtggg cattgttgct 2280
ggcctggctg tcctagcagt tgtggtcatc ggagctgtgg tcgctactgt gatgtgtagg 2340
aggaagagct caggtaggga aggggtgagg ggtggggtct gggttttctt gtcccactgg 2400
gggtttcaag ccccaggtag aagtgttccc tgcctcatta ctgggaagca gcatccacac 2460
aggggctaac gcagcctggg accctgtgtg ccagcactta ctcttttgtg cagcacatgt 2520
gacaatgaag gacggatgta tcgccttgat ggttgtggtg ttggggtcct gattccagca 2580
ttcatgagtc aggggaaggt ccctgctaag gacagacctt aggagggcag ttggtccagg 2640
acccacactt gctttcctcg tgtttcctga tcctgccttg ggtctgtagt catacttctg 2700
gaaattcctt ttggttccaa gacgaggagg ttcctctaag atctcatggc cctgcttcct 2760
cccagtcccc tcacaggaca ttttcttccc acaggtggaa aaggagggag ctactctcag 2820
gctgcgtgta agtggtgggg gtgggagtgt ggaggagctc acccacccca taattcctcc 2880
tgtcccacgt ctcctgaggg ctctgaccag gtcctgtttt tgttctactc cagccagcga 2940
cagtgcccag ggctctgatg tgtctctcac agcttga 2977
//