Dbfetch
ID LT962571; SV 1; linear; genomic DNA; STD; HUM; 3340 BP. XX AC LT962571; XX PR Project:PRJEB22644; XX DT 09-JAN-2020 (Rel. 143, Created) DT 09-JAN-2020 (Rel. 143, Last updated, Version 1) XX DE Homo sapiens HLA-B gene for MHC class I antigen, allele HLA-B*50:02 XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RA Marsh GE S.; RT ; RL Submitted (06-NOV-2017) to the INSDC. RL ANRI, HLA Informatics Group, Royal Free Hospital, London, NW3 2QG, NW3 2NU, RL United Kingdom XX DR MD5; 5fc253effbdd12fe4ff1b9c39a581b78. XX FH Key Location/Qualifiers FH FT source 1..3340 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="AN00974" FT /db_xref="taxon:9606" FT CDS join(285..357,486..755,1006..1281,1857..2132,2237..2353, FT 2795..2827,2934..2977) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-B" FT /allele="HLA-B*50:02" FT /product="MHC class I antigen" FT /function="antigen presenting molecule" FT /protein_id="SOQ60042.1" FT /translation="MRVTAPRTVLLLLSAALALTETWAGSHSMRYFHTAMSRPGRGEPR FT FITVGYVDDTLFVRFDSDATSPRKEPRAPWIEQEGPEYWDRETQISKTNTQTYRESLRN FT LRGYYNQSEAGSHTWQRMYGCDLGPDGRLLRGYNQLAYDGKDYIALNEDLSSWTAADTA FT AQITQRKWEAAREAEQLRAYLEGLCVESLRRYLENGKETLQRADPPKTHVTHHPISDHE FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPKPLTLRWEPSSQSTIPIVGIVAGLAVLAVVVIGAVVATVMCRRKSSGGK FT GGSYSQAASSDSAQGSDVSLTA" FT exon 285..357 FT /gene="HLA-B" FT /allele="HLA-B*50:02" FT /number=1 FT intron 358..485 FT /gene="HLA-B" FT /allele="HLA-B*50:02" FT /number=1 FT exon 486..755 FT /gene="HLA-B" FT /allele="HLA-B*50:02" FT /number=2 FT intron 756..1005 FT /gene="HLA-B" FT /allele="HLA-B*50:02" FT /number=2 FT exon 1006..1281 FT /gene="HLA-B" FT /allele="HLA-B*50:02" FT /number=3 FT intron 1282..1856 FT /gene="HLA-B" FT /allele="HLA-B*50:02" FT /number=3 FT exon 1857..2132 FT /gene="HLA-B" FT /allele="HLA-B*50:02" FT /number=4 FT intron 2133..2236 FT /gene="HLA-B" FT /allele="HLA-B*50:02" FT /number=4 FT exon 2237..2353 FT /gene="HLA-B" FT /allele="HLA-B*50:02" FT /number=5 FT intron 2354..2794 FT /gene="HLA-B" FT /allele="HLA-B*50:02" FT /number=5 FT exon 2795..2827 FT /gene="HLA-B" FT /allele="HLA-B*50:02" FT /number=6 FT intron 2828..2933 FT /gene="HLA-B" FT /allele="HLA-B*50:02" FT /number=6 FT exon 2934..2977 FT /gene="HLA-B" FT /allele="HLA-B*50:02" FT /number=7 XX SQ Sequence 3340 BP; 616 A; 974 C; 1051 G; 699 T; 0 other; gatcaggacg aagtcccagg ccccgggcgg ggctctcagg gtctcaggct ccgagggccg 60 cgtctgcaat ggggaggcgc agcgttgggg attccccact cccacgagtt tcacttcttc 120 tcccaaccta tgtcgggtcc ttcttccagg atactcgtga cgcgtcccca tttcccactc 180 ccattgggtg tcgggtgtct agagaagcca atcagcgtcg ccgtggtccc agttctaaag 240 tccccacgca cccacccgga ctcagaatct cctcagacgc cgagatgcgg gtcacggcac 300 cccgaaccgt cctcctgctg ctctcggcgg ccctggccct gaccgagacc tgggccggtg 360 agtgcgggtc ggcagggaaa tggcctctgt ggggaggagc gaggggaccg caggcggggg 420 cgcaggaccc ggggagccgc gccgggagga gggtcgggcg ggtctcagcc cctcctcgcc 480 cccaggctcc cactccatga ggtatttcca caccgccatg tcccggcccg gccgcgggga 540 gccccgcttc atcaccgtgg gctacgtgga cgacacgctg ttcgtgaggt tcgacagcga 600 cgccacgagt ccgaggaagg agccgcgggc gccatggata gagcaggagg ggccggagta 660 ttgggaccgg gagacacaga tctccaagac caacacacag acttaccgag agagcctgcg 720 gaacctgcgc ggctactaca accagagcga ggccggtgag tgaccccggc ccggggcgca 780 ggtcacgact ccccatcccc cacgtacggc ccgggtcgcc ccgagtctcc gggtccgaga 840 tccgcccccc tgaggccgcg ggacccgccc agaccctcga ccggcgagag ccccaggcgc 900 gtttacccgg tttcattttc agttgaggcc aaaatccccg cgggttggtc ggggcggggc 960 ggggcggggc tcgggggacg gggctgaccg cggggcctgg gccagggtct cacacttggc 1020 agaggatgta tggctgcgac ctggggcccg acgggcgcct cctccgcggg tataaccagt 1080 tagcctacga cggcaaggat tacatcgccc tgaacgagga cctgagctcc tggaccgcgg 1140 cggacaccgc ggctcagatc acccagcgca agtgggaggc ggcccgtgag gcggagcagc 1200 tgagagccta cctggagggc ctgtgcgtgg agtcgctccg cagatacctg gagaacggga 1260 aggagacgct gcagcgcgcg ggtaccaggg gcagtgggga gccttcccca tctcctatag 1320 gtcgccgggg atggcctccc acgagaagag gaggaaaatg ggatcagcgc tagaatgtcg 1380 ccctcccttg aatggagaat ggcatgagtt ttcctgagtt tcctctgagg gccccctctt 1440 ctctctagga caattaaggg atgacgtctc tgaggaaatg gaggggaagt cagtccctag 1500 aatactgatc aggggtcccc tttgacccct gcagcagcct tgggaaccgt gacttttcct 1560 ctcaggcctt gttctctgcc tcacactcag tgtgtttggg gctctgattc cagcacttct 1620 gagtcacttt acctccactc agatcaggag cagaagtccc tgttccccgc tcagagactc 1680 gaactttcca atgaatagga gattatccca ggtgcctgcg tccaggctgg tgtctgggtt 1740 ctgtgcccct tccccacccc aggtgtcctg tccattctca ggctggtcac atgggtggtc 1800 ctagggtgtc ccatgagaga tgcaaagcgc ctgaattttc tgactcttcc catcagaccc 1860 cccaaagaca catgtgaccc accaccccat ctctgaccat gaggccaccc tgaggtgctg 1920 ggccctgggc ttctaccctg cggagatcac actgacctgg cagcgggatg gcgaggacca 1980 aactcaggac accgagcttg tggagaccag accagcagga gatagaacct tccagaagtg 2040 ggcagctgtg gtggtgcctt ctggagaaga gcagagatac acatgccatg tacagcatga 2100 ggggctgccg aagcccctca ccctgagatg gggtaaggag ggggatgagg ggtcatatct 2160 gttctcaggg aaagcaggag cccttctgga gcccttcagc agggtcaggg cccctcatct 2220 tcccctcctt tcccagagcc atcttcccag tccaccatcc ccatcgtggg cattgttgct 2280 ggcctggctg tcctagcagt tgtggtcatc ggagctgtgg tcgctactgt gatgtgtagg 2340 aggaagagct caggtaggga aggggtgagg ggtggggtct gggttttctt gtcccactgg 2400 gggtttcaag ccccaggtag aagtgttccc tgcctcatta ctgggaagca gcatccacac 2460 aggggctaac gcagcctggg accctgtgtg ccagcactta ctcttttgtg cagcacatgt 2520 gacaatgaag gacggatgta tcgccttgat ggttgtggtg ttggggtcct gattccagca 2580 ttcatgagtc aggggaaggt ccctgctaag gacagacctt aggagggcag ttggtccagg 2640 acccacactt gctttcctcg tgtttcctga tcctgccttg ggtctgtagt catacttctg 2700 gaaattcctt ttggttccaa gacgaggagg ttcctctaag atctcatggc cctgcttcct 2760 cccagtcccc tcacaggaca ttttcttccc acaggtggaa aaggagggag ctactctcag 2820 gctgcgtgta agtggtgggg gtgggagtgt ggaggagctc acccacccca taattcctcc 2880 tgtcccacgt ctcctgaggg ctctgaccag gtcctgtttt tgttctactc cagccagcga 2940 cagtgcccag ggctctgatg tgtctctcac agcttgaaaa ggtgagattc ttggggtcta 3000 gagtgggtgg ggtggcgggt ctgggggtgg gtggggcagt ggggaaaggc ctgggtaatg 3060 gagattcttt gattgggatg tttcgcgtgt gtggtgggct gttcagagtg tcatcactta 3120 ccatgactaa ccagaatttg ttcatgactg ttgttttctg tagcctgaga cagctgtctt 3180 gtgagggact gagatgcagg atttcttcac gcctcccctt tgtgacttca agagcctctg 3240 gcatctcttt ctgcaaaggc acctgaatgt gtctgcgtcc ctgttagcat aatgtgagga 3300 ggtggagaga cagcccaccc ttgtgtccac tgtgacccct 3340 //