Dbfetch
ID LR828209; SV 1; linear; genomic DNA; STD; HUM; 10563 BP. XX AC LR828209; XX PR Project:PRJEB39113; XX DT 23-JUL-2020 (Rel. 144, Created) DT 23-JUL-2020 (Rel. 144, Last updated, Version 1) XX DE Homo sapiens, HLA-DRB1 gene for MHC class II antigen, cell line DE DKMS-LSL_ID14962955_DRB1_2, allele HLA-DRB1*01:new XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RA Albrecht V., Schmidt H. A., Klussmeier A., Lange V., Putke K.; RT ; RL Submitted (29-JUN-2020) to the INSDC. RL DKMS LIFE SCIENCE LAB, Research & Development, St. Petersburger Str. 2, RL Saxony, 01069 Dresden, Germany XX DR MD5; b8fe4cbc415889b6f13bed1429d163c5. XX FH Key Location/Qualifiers FH FT source 1..10563 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /cell_line="DKMS-LSL_ID14962955_DRB1_2" FT /db_xref="taxon:9606" FT exon 1..151 FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*01:new" FT /number=1 FT CDS join(52..151,5424..5693,7923..8204,8906..9016,9504..9527, FT 10349..10362) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*01:new" FT /product="MHC class II antigen" FT /function="antigen presenting molecule" FT /protein_id="CAD0297739.1" FT /translation="MVCLKLPGGSCMTALTVTLMVLSSPLALAGDTRPRFLWQLKFECH FT FFNGTERVRLLERCIYNQEESVRFDSDVGEYRAVTELGRPDAEYWNSQKDLLEQRRAAV FT DTYCRHNYGVGESFTVQRRVEPKVTVYPSKTQPLQHHNLLVCSVSGFYPGSIEVRWFRN FT GQEEKAGVVSTGLIQNGDWTFQTLVMLETVPRSGEVYTCQVEHPSVTSPLTVEWRARSE FT SAQSKMLSGVGGFVLGLLFLGAGLFIYFRNQKGHSGLQPTGFLS" FT intron 152..5423 FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*01:new" FT /number=1 FT exon 5424..5693 FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*01:new" FT /number=2 FT intron 5694..7922 FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*01:new" FT /number=2 FT exon 7923..8204 FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*01:new" FT /number=3 FT intron 8205..8905 FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*01:new" FT /number=3 FT exon 8906..9016 FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*01:new" FT /number=4 FT intron 9017..9503 FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*01:new" FT /number=4 FT exon 9504..9527 FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*01:new" FT /number=5 FT intron 9528..10348 FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*01:new" FT /number=5 FT exon 10349..10563 FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*01:new" FT /number=6 XX SQ Sequence 10563 BP; 2799 A; 2095 C; 2545 G; 3124 T; 0 other; gagtgagact tgcctgcttc tctggcccct ggtcctgtcc tgttctccag catggtgtgt 60 ctgaagctcc ctggaggctc ctgcatgaca gcgctgacag tgacactgat ggtgctgagc 120 tccccactgg ctttggctgg ggacacccga cgtaagtgca cattgcgggt gctgagctac 180 tatggggtgg ggaaaatagg gagttttgtt aacattgtgc ccaggccatg tcccttaaga 240 aattgtgacg ttttcttcag agattgccca tctttatcat tggatcccaa attatttcct 300 ccataaaagg agcttgggta cttgccctct tcatgagact tgtgtaaggg gcctttgcac 360 aagtcatttc ttttcaaatc tccaccaata aaacctttgc atcacatgtc ctcagggtct 420 ttagaggatt tagaaataag gattctaaaa taaattcccc atacagcact tccctttatt 480 atgttgactt atgtcagaca aaaggaggtt cttactgaaa attttgtggg agtcaaggga 540 attcaaaggg tctctcctag acgatccagt gttaggttcc ccacaggacc tttggtgttg 600 gccatagtcc tcatatgtga ggatggaccc agtggcctcc ccattatctc ctttcttttc 660 ttgctgaact ccaatgttta taaggcctgt atccctgtag cgtatgtagg ttctctgaca 720 gaagttatac ttagtgctct tcctttcttg tggggaaaag tccctggaac tgaagctgag 780 attgttagta cttggagtca ccttacagat acagagcatt tatgaggtat tctttggtgc 840 ctaaagaact taaggcatcc tctgaaaaac tagcccaggt tcgtgttcat tatgaatctt 900 ttttaacctt tctgtacttg tttctcttgc atctcctatg tgctctaact agacatgaca 960 gaagagattt aactaatgta taaattatat gaaattctat tttttaagtc aaaaataatc 1020 aactatcaga aatttaataa tgttcaaact atatactctg tgtggggtta ccgagatgat 1080 gtgaacattg ttcacgtctc atagggctga aagtcaatgg gcaagtcttg ggaactcatt 1140 gtcttactgg ggtcttgtcc taaatttcct aggttcaccc atcatgccct cagctttcct 1200 taactagcca tgtctgctta cctcttcctc cagtttctat ttttccccag ctatgttgtc 1260 atcatttcca gaaatctcta aagcttgcac agaaccttag cactatgcga ttcattgaaa 1320 gagacttttt ttctcttttt gaggtagggc ctggctctgt cacccagtct atagctcagt 1380 ggtgtgatcg aggctcactg caacctctgc cacccatgct caagtgatcc tccctcctca 1440 ggctccagag tagctgggaa tacaggcagg caaccacgcc cagctaattt ttgtaatttt 1500 ggtagacatg agattttgcc atgttgccca ggctggtctt aaactgctgg tttcaagcaa 1560 tcctcctgcc ttggcctccc aacatgctag gattatagat gtgagccact gtgcccaggc 1620 aaaaagaaat gactcttaat aaaaaaattt cctttttctt aaatcactgt ttctttatct 1680 gtgaattctt cttccaacta gaaggaggag aaaaaagaag tttgcctgta tttctcacca 1740 ggaggagaag gggtctagtg tgacattaaa atgaaagggt gctggagctt gagccccttc 1800 ttgctttcca ggatccctac agtgatcagt tcccataccc tggtttattc atgtaaacca 1860 cacttatttt tctcagcagc tactctttac tgggctccat tctaggttca aatcattcta 1920 tttgattaag ttagagagcg tccctactct catggaagtt acacaagagt agaggagaca 1980 gacactaacc caataagcat ttaacaaaga agataatgtt agagagtcat agtgcactga 2040 agaaaagaca tcaggtttgt gaaaaagaga gacatggatt cacctacttt agttcatatg 2100 ttagggagct ccacctgaga aagtgacatt cagctgagac aacaaaataa gtagacagtc 2160 gtgaagatct aagggatgaa agttccaggg agaccaaatg gcgggaaagc cctggtgtgg 2220 gaaactatgt ggagggagag aaagaaagct agaggggctg aagtatagaa agcaacgaaa 2280 tggagaggca gaagatgagg taggacacag agaggaagtc aggagcctca tcattatagg 2340 ctctgatgtc cacggtaaaa aaaatttgaa ttttattatt tatttaccta tttatttgtt 2400 tatttatttt attttatttt gtgatggagt ctctctctgt tgcccaggct agatggcagt 2460 ggcacaatct cggctcactg caacctccgc ctcctgggtt caagcaattc tcctgcctca 2520 gcctcccaat tagctggggc cacaggtgca tgccaccaca cctggctaat tttttgtatt 2580 tttagtaggg ataggatttc accgtgttag ccaggatggt ctcgatctcc tgacctcgtg 2640 atccgcccgc cttggcctcc caaagtgctg ggattatagg cgtgagccac tgcacccggc 2700 ctatattcaa tttttaaaac taattctagc tactctgtgg ggattggatt gttggggttc 2760 accagtggtt aggaagacta tttaggagca cagcagggaa ttctccaggg aaaacaagct 2820 tgtggcttca tggagtgcat tagtgataaa gacggtgaag aagataaagt ggacagactc 2880 ggcatgtatt tttgcttagc ttgttaatga attactgtaa agggggtaga gcttattcct 2940 aaggattttc ttttgacaaa taagtgggtg gtagtgttgt ttattgagat aggaaaaact 3000 atgggaggaa atgatttgaa gtgggtggtt tgaaataaaa gttttgttta aatatgagat 3060 gattgactga catttatgtg gagcaatcag aaggtcaatg gcatttaaga gactcatggt 3120 gaggctaggg cttcaggtat ttatgttgga ggcatcaata cgtgtagtgt gttaaattcc 3180 agggagtgga agaggataca tagggagatg gattgtgtgg agaaacaaga agagggcaca 3240 ggccagcaaa gggggctgag aaagagccca gggatgttgg agaaaaacca agagaacatc 3300 atgtatgtaa gtcaaggaaa acagattttt ttcaaggaga agggagaggc caattgtggt 3360 gagtaccact aagaggaggg ggaagtgaga atatgacaga gaagcaagtg ctgggattgg 3420 tggagttgat atttgcagtc aatggagtat ccagggagga aactggattg gaccatttgg 3480 agagcaaata aaagtgagga cgaggttaag gttgactgtt ctgtgtagag agcttcaggg 3540 aaggattgtt ctctgggttc agggagccag ctgaacctaa aggaaaaggc taaagaagct 3600 gaagagaagg aggaggacct gtgaaccaga gatgctcagc cattattagc aaggaaatac 3660 aagagagccc ctgtgtgcag tggtgactac tcatgcaaaa tgtcacacag ccaatattta 3720 acacagccag gatttcacac agccaatatt tattagtgac atagaatata tttgttattg 3780 ctctaggtca tgagaatgga gtgacaaaat gaatccggtc gccatcagta tatgccacat 3840 aacattttgc agtgactgtg tgccaggcct atgaatttca gtattcaatt tcaataatga 3900 tcctgttgta tctgtggtat ttaaaaacat atacatctct gtaatctaaa attgagaggt 3960 tataagtaaa acccagtatt acaaatttag tgctggaaat tgattgcagt ttaaatctga 4020 gcatatagaa agtccctttc ttctatgtca gcagatgcct tttgtgtgag gtttaggtat 4080 actgcattat tagacataaa ccagtgtttc tgccctatgt tttcagaatg acaattcttt 4140 atgaaactaa tagaagaaca gaagacaatt gcaaaatcat gatgaagata ctaattgctt 4200 tagaattaag gaatacaaat aatgtgagct gcagttatag ggatcaaaaa agttacaatg 4260 ggaatgtatt tgagtgttta ttatgtgatc agtgctaaga agtgtcatca tttaatttta 4320 cacttaacag taatcctgtg aggattatgc tattattaaa tgcacttgat acattacaaa 4380 aaggcttatg gttgatataa attgacccaa gtagaagaga tcatgttttt attcaggttt 4440 tctgattcta gagtttgaga gtttgaccat cattagtgag tagtgactat attgtgtctg 4500 aattattgac agaatttctg atattcatat gtaccaggtt gtttcttaga gtgggagcag 4560 agatgcaagg gctgctagtt ccgatgtgta ggagaaacta tcattcattt tgcatttatc 4620 attttaaacg ttctatatgt ctatcctggg catgtgttga agaacacaag gaagtattaa 4680 atcactcctt cttctgaagt ttgactggca aaattgggct agagttacga aataaaatac 4740 aggttcctag tgaaatctga atttcagata cacaaccata atttattgga aatccaaatt 4800 taactggata tcttctatta ttctctgttc tagaactcca cacttctaac atttctcatt 4860 cctgtctaag ctcttgtgtg tttggttttt ggccatcgct ttcactgctc tttaagctcc 4920 cccagtagag tggagaggtc tgttttccct cgtttggatt cctacaggca gcgcaggcct 4980 ggcacaaggt catcactaag gaagtgttca cagggtgaag gcggtgggtg ctgttgaagg 5040 aaccggtaaa gcctgtggga tgagagaagg agcagagagt gtttttgggg tggaggctcc 5100 caggaggagg cgggacgggc tgcggtgctg ggcggatcct cctccagctc ctgcttggag 5160 gtctccagaa caggctggag gcagggaggg ggtcccaaaa gcctggggat gagaaggggt 5220 tttcccgcat ggtcccccag gcccccgttc gcctcaggaa gacggaggat gagctcctgg 5280 gctgctggtg gtgggcgttg cgggtggggc cggttaaggt tcccagtgcc cgcaccctgc 5340 ccagggagcc ccggatggtg gcgtcgctgt cagtgtcttc tcaggaggct gcccgtgtga 5400 ccggatcctt cgtgtcccca cagcacgttt cttgtggcag cttaagtttg aatgtcattt 5460 cttcaatggg acggagcggg tgcggttgct ggaaagatgc atctataacc aagaggagtc 5520 cgtgcgcttc gacagcgacg taggggagta ccgggcggtg acggagctgg ggcggcctga 5580 tgccgagtac tggaacagcc agaaggacct cctggagcag aggcgggccg cggtggacac 5640 ctactgcaga cacaactacg gggttggtga gagcttcaca gtgcagcggc gaggtgagcg 5700 cggcgcgggg cggggcctga gtccctgtaa gcggagaatc tgagtgtgtg tgtgtgtgtg 5760 tgtgtgtgtg tgtgtaagaa agagagagag cgcgccatct gtgagcattt agaatcctct 5820 caatccccag caagcagttc tgagagcaca ggtgtgtgtg tagagtgtgg atttgtctgg 5880 gtatgtctgt tgtgggaggg gaggcaggag ggggctgatt cttatccttg gagacctctg 5940 tggggaggtg acaagggagg tgggtgctgg gggctggaga gagaggagac cttgattgtc 6000 tcgggtcctt agagatgcgg ggaagggaaa tgtaaggggt gtgtgattgg ggtgaaggtt 6060 taggggagga ctgctgaggg gtaaggaagg tttgggataa tgtgaggagg ccggttccag 6120 actctccctg gcatacaccc ttcgtgtaat ctctgaaata aaagtgtgtg ctgtttgttt 6180 gtaaaagcat tagattaatt tctagaggaa ctgagtagac ctctgaggca ctcctgaagc 6240 ttctttatat ctaaatttct tgctagtttt ttgggttttt ttagtgtgta tatttttaca 6300 tagtagaaat gactgtgaaa ctaacttttt gaattaaagt tttaacacag ttactatttt 6360 attataatgc tagttttcta gtagttacat attattcttt tatatataat agttatgaca 6420 caactcacct cactttcccc tttgttgacc tttattatga cattcaccaa aagttgaaaa 6480 tgtatgtttc tggttaattt ttaatttata ttttttattt gtaattgctt tgaattattt 6540 tgacctattt attggcggat tataattatt gctctaagaa ttccctattg tatttggtag 6600 gcaatggaca atgatctatg gtctgatatc ttgagggctt agtatttttc tcagtgactt 6660 tgtgggttct ttgtgctata agattattaa cactttattg atatttgatc cagcatttgc 6720 ttcagtttgt ggtttgtatg tggattttga aagttctttt ccatgttaag aatttgaact 6780 ttttatttaa taaaatatat tgcaaaattt ttattaatga tttacaatcc atcttaaatc 6840 tgccattttg tggcattgtt gtctccaggt tcctccttac ttctaaaaaa aatagttgta 6900 tttattgaga gtatgctagt gttggggatt ttcctgggca taagcacccc aagtaacaag 6960 tcccagacac tgccttaatc caaatgtgac tctggaaaga aaaatcattt tacaatgata 7020 ggcctaataa taattatgct tgtgttacac gggagatgca ttgatcagct aaatgtaaat 7080 ataagaactt tcaaaactaa aatgacattc cctaatcctt ttctctgctt cgggactcat 7140 gcttttctag gaacgtaaaa atttggagaa tcatttctgt ctgtcccaca ttcccagggg 7200 cagaacaatt tctgttttgt tctaaggtgt gagtgcatgg cagtagtatt cctaaaattc 7260 atactcggtt tcctcatgta cccaattctg tccctttatc tatgcatatt tctttaaatc 7320 atatttttct gtcatggggt acaaggatga taaataggtg ccaagtggag cacccaagtg 7380 tgatgagcgc cctcacagtg gaatggagtg agaagctttc tgaccttata aactgaaggc 7440 tatcttcagt cattgtttta tatattttac atgcattaat cctcatataa ccccaagagg 7500 taaattagta taattatcct tcattgtagg tgacaaagtt gagacacaga agaatcaaaa 7560 aactcttcca ggatcaacca gtaaaaggca gaccttggat tcgaaccaag caacctggct 7620 caaatatcag ttttaattac tacactctat actttccaag atttgtaaac agtttgacaa 7680 tgcatgccaa tttaaagcta tgaagaaaca aacacaattt ttcacaacac ctctcaaatc 7740 taatgggtcc tcactgtcaa gattaaattc caggctgatg acactgtaag gtcacatggc 7800 cagctgtgct ataggcctgg tcaaggtcag agcctgggtt tgcagagaag cagacacaca 7860 gccaaaccag gagacttact ctgtcttcct gactcattct ctctacattt gttttctcct 7920 agttgagcct aaggtgactg tgtatccttc aaagacccag cccctgcagc accacaacct 7980 cctggtctgc tctgtgagtg gtttctatcc aggcagcatt gaagtcaggt ggttccggaa 8040 cggccaggaa gagaaggctg gggtggtgtc cacaggcctg atccagaatg gagattggac 8100 cttccagacc ctggtgatgc tggaaacagt tcctcggagt ggagaggttt acacctgcca 8160 agtggagcac ccaagtgtga cgagccctct cacagtggaa tggagtgagc agctttctga 8220 cttcataaat ttctcaccca ccaagaaggg gactgtgcta atccctgagt gtcaggtttc 8280 tcctctccca caccctattt tcatttgctc catgttctca tctccatcag cacaggtcac 8340 tgggggtagc cctgtaggtg tttctagaaa cacctgtacc tcctggagaa gcagtctcac 8400 ctgccaggca ggagagactg tccctctttt gaacctcccc atgatttcgc aggtcagggt 8460 cacccactct ccccaggctc caggccctgc ttctgggtct gagactgagt ttctggtgct 8520 gttgctctga gttatttttt gtgatctggg aagaggagaa gtgtaggggc ctacctgaca 8580 tgaggggaat ccaatctcag ccctgccttt tattagctct gtcactctag acaaactact 8640 tagcttcatt gagtctcagg ctttctgttg atcagatgtt gaacgcttgc cttacatcaa 8700 ggctgtaata tttgaatgag tttgatgtct gaacatcgta actgttcagc gtgatttgaa 8760 atcctttttt tctcctgaaa tggctagtta ttttaattct tgtggggcag gcttctgccc 8820 cattttcaaa gctctgaatc ttagagtctc aattaaagag gttcaatttg gaataagcat 8880 cactaaacct ggattcctct ctcaggagca cggtctgaat ctgcacagag caagatgctg 8940 agtggagtcg ggggcttcgt gctgggcctg ctcttccttg gggccgggct gttcatctac 9000 ttcaggaatc agaaaggtga ggagcctttg ggagctgact ctctccatag gcttttctgg 9060 aggaggaacc atggttttgc tgagaggtta gttctcagta tacgagtggc cctgaataaa 9120 gcctttcttt ccccaaacgg ctctaatgtc ctgctaatcc agaaatcatc agtgcatggt 9180 tactatgtca aagcataata gcttgtggcc tgcagagaca agaggaaggt taacaagtag 9240 gggtcctttt gtttgagatc ctggagcaaa ttaaggaaga gccactaagg ctaatggaat 9300 tacactggat cctgtgacag acacttcagg cttcatgggt cacatggtct gtctctgctc 9360 ctttctgccc ctttctgccc tggttggtgc gggttgtggt gttagagaaa tctcaggtgg 9420 gagatctgcg gctgggacat tgtgttggag gacagatttg cttcaataac ttttaagtgt 9480 atttcttttc ctctttttcc caggacactc tggacttcag ccaacaggta atacctttta 9540 atcctctttt agaaacagac acagtttccc tagtgagagg tgaagccagc tggacttctg 9600 ggtggggtgg ggacttggag aacttttctt acaagaggtt tctaaatgcc ccaatcagtg 9660 ctttgtaaaa acacaccaat aggttctctg tggctagctg gatgtttgta aaatggacca 9720 atttgcactc tgtaaaatgg accaatcagc attctttaaa atggaccaat cagcactttt 9780 aaaatgggcc aatcagcact ctttaaaatg gaccaatcag cactctttaa aatggaccaa 9840 tctgcaggac atgggcaggg acaaatacag gaataaaagc tggccacccc aaccagcagt 9900 ggcaacccac tcaggtcctc ttccctgctg tggaagtttt gttcttttga tcttcacaat 9960 aaatcttgct gctgcctact ctttgggtcc ctgccgcctt taagagctgt aacactcact 10020 gtgaaggtct gcttgaagtc agcgagacca caaacccact ggaaggaaca aactgcggac 10080 acactagaat gatggtagag gtgataaggc atgagacaga aataatagga aagactttgg 10140 atccaaattt ctgatcaggc aatttacacc aaaattcctc ctctccactt agaaaagggc 10200 tgtgctctgc gggactattg gctcagggga gactcaggaa cttgtttttc tgcttcctgc 10260 agtgctctca tctgagccct tgaaagagga gaaaagaaac tgttagtaga gccaggttga 10320 aaacaacact ctcctctgtc ttttgcagga ttcctgagct gaaatgcaga tgaccacatt 10380 caaggaagaa ccttctgtcc cagctttgca gaatgaaaag ctttcctgct tggcagttat 10440 tcttccacaa gagagggctt tctcaggacc tggttgctac tggttcggca actgcagaaa 10500 atgtcctccc ttgtggcttc ctcagctcct gcccttggcc tgaagtccca gcattgatga 10560 cag 10563 //