Dbfetch
ID LR761678; SV 1; linear; genomic DNA; STD; HUM; 3313 BP.
XX
AC LR761678;
XX
PR Project:PRJEB36769;
XX
DT 24-NOV-2020 (Rel. 144, Created)
DT 24-NOV-2020 (Rel. 144, Last updated, Version 1)
XX
DE Homo sapiens, HLA-E pseudogene, cell line DKMS-LSL_ID15947273_E_1, null
DE allele HLA-E*01:new
XX
KW .
XX
OS Homo sapiens (human)
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
XX
RN [1]
RA Albrecht V., Schmidt H. A., Klussmeier A., Lange V., Putke K.;
RT ;
RL Submitted (14-FEB-2020) to the INSDC.
RL DKMS LIFE SCIENCE LAB, Research & Development, St. Petersburger Str. 2,
RL Saxony, 01069 Dresden, Germany
XX
DR MD5; c38592f717a54ad9d2468b4ba1373681.
XX
FH Key Location/Qualifiers
FH
FT source 1..3313
FT /organism="Homo sapiens"
FT /mol_type="genomic DNA"
FT /cell_line="DKMS-LSL_ID15947273_E_1"
FT /db_xref="taxon:9606"
FT exon 1..98
FT /gene="HLA-E"
FT /allele="HLA-E*01:new"
FT /number=1
FT CDS join(35..98,229..498,743..1018,1640..1915,2040..2156,
FT 2907..2939,3044..3086,3252..3256)
FT /codon_start=1
FT /transl_table=1
FT /gene="HLA-E"
FT /allele="HLA-E*01:new"
FT /note="MHC class I antigen null allele"
FT /pseudogene="allelic"
FT intron 99..228
FT /gene="HLA-E"
FT /allele="HLA-E*01:new"
FT /number=1
FT exon 229..498
FT /gene="HLA-E"
FT /allele="HLA-E*01:new"
FT /number=2
FT intron 499..742
FT /gene="HLA-E"
FT /allele="HLA-E*01:new"
FT /number=2
FT exon 743..1018
FT /gene="HLA-E"
FT /allele="HLA-E*01:new"
FT /number=3
FT intron 1019..1639
FT /gene="HLA-E"
FT /allele="HLA-E*01:new"
FT /number=3
FT exon 1640..1915
FT /gene="HLA-E"
FT /allele="HLA-E*01:new"
FT /number=4
FT intron 1916..2039
FT /gene="HLA-E"
FT /allele="HLA-E*01:new"
FT /number=4
FT exon 2040..2156
FT /gene="HLA-E"
FT /allele="HLA-E*01:new"
FT /number=5
FT intron 2157..2906
FT /gene="HLA-E"
FT /allele="HLA-E*01:new"
FT /number=5
FT exon 2907..2939
FT /gene="HLA-E"
FT /allele="HLA-E*01:new"
FT /number=6
FT intron 2940..3043
FT /gene="HLA-E"
FT /allele="HLA-E*01:new"
FT /number=6
FT exon 3044..3086
FT /gene="HLA-E"
FT /allele="HLA-E*01:new"
FT /number=7
FT intron 3087..3251
FT /gene="HLA-E"
FT /allele="HLA-E*01:new"
FT /number=7
FT exon 3252..3313
FT /gene="HLA-E"
FT /allele="HLA-E*01:new"
FT /number=8
XX
SQ Sequence 3313 BP; 659 A; 932 C; 990 G; 732 T; 0 other;
ctcaagaagt tctcaggact cagaggctgg gatcatggta gatggaaccc tccttttact 60
cctctcggag gccctggccc ttacccagac ctgggcgggt gagtgcgggg tcgggatgga 120
aacggcctct accgggagta gagaggggcc ggcccggcgg gggcgaagga ctcggggagc 180
cgcgccggga ggagggtcgg gccgatctca gcccctcctc gcccccaggc tcccactcct 240
tgaagtattt ccacacttcc gtgtcccggc ccggccgcgg ggagccccgc ttcatctctg 300
tgggctacgt ggacgacacc cagttcgtgc gcttcgacaa cgacgccgcg agtccgagga 360
tggtgccgcg ggcgccgtgg atggagcagg aggggtcaga gtattgggac cgggagacac 420
ggagcgccag ggacaccgca cagattttcc gagtgaatct gcggacgctg cgcggctact 480
acaatcagag cgaggccggt gagtgacccc ggccagggga gcaggtcacg acccctcccc 540
atcccccacg gacggcgcgg gtcccctcga atcttcgggt cccagattca ccccaaggct 600
gcggaacccg cccagaccct agaccgggga gagtctcagg cgcctttacc cggttctttt 660
tcagtttagg ccaaaatgcc cacagggtgg tggcgacggg ggcggggctt ggtgggcggg 720
actgactaag gggcggggcc agggtctcac aacctgcagt ggatgcatgg ctgcgagctg 780
gggcccgacg ggcgcttcct ccgcgggtat gaacagttcg cctacgacgg caaggattat 840
ctcaccctga atgaggacct gcgctcctgg accgcggtgg acacggcggc tcagatctcc 900
gagcaaaagt caaatgatgc ctctgaggcg gagcaccaga gagcctacct ggaagacaca 960
tgcgtggagt ggctccacaa atacctggag aaggggaagg agacgctgct tcacctgggt 1020
aagagggtcc acagggctac tctcccatct ccttcttggg ctaggactgt gcccacagct 1080
gacagacctc aaacagtaga agaaacaggg atggaggcca gaataccact cctcccttgg 1140
atcaggagag ggagctgtca cctgaggtac aggagatcct ataccacaga gtgactctct 1200
taaagggcca gacctctctc aggggcaatt aaggaatcta gtctcgctgg agattccatc 1260
cttcagatga actgatgagc agttctcttt gactcccagt attaggaatc acgggggagt 1320
ttctctcgtg cctgattctc agccccacac caagagtttt tggaggtctg actccagctt 1380
ttctcagtca ctcagcatcc acacaggcca ggaccagaaa tcccttttca ccttctaccc 1440
tgggctagct catcccgatt ctagaacttt ccaaggaata agaggctatc ccagatccct 1500
aagtccaggc tggtgtcaag gttttgtcct cttctcctac tataattgtc ctcttccttc 1560
tcaggatggt cacatgggtg ctgctggagt gtcccatgag agatacaaag tgcctgaatt 1620
ttctgactct tcccctcaga gcccccaaag acacacgtga ctcaccaccc catctctgac 1680
catgaggcca ccctgaggtg ctgggccctg ggcttctacc ctgcggagat cacactgacc 1740
tggcagcagg atggggaggg ccatacccag gacacggagc tcgtggagac caggcctgca 1800
ggggatggaa ccttccagaa gtgggcagct gtggtggtgc cttctggaga ggagcagaga 1860
tacacgtgcc atgtgcagca tgaggggcta cccgagcccg tcaccctgag atggagtaag 1920
gagggggatg ggaggtcatg tctcttctca gggaaagcgg gagcccttct ggagcccttc 1980
cgcagggtca gggctgaggc ctgggggtca gggcccctta cgttcccctc ttttcccaga 2040
gccggcttcc cagcccacca tccccatcgt gggcatcatt gctggcctgg ttctccttgg 2100
atctgtggtc tctggagctg tggttgctgc tgtgatatgg aggaagaaga gctcaggtgg 2160
ggaagggaga agggtggggt ctgagttttc ttgtcccact gggtgtttca agccctaggt 2220
aaaagtgtgt cctgcctcgt tactgggaag caccatccac acacacgagc ctacccagcc 2280
tggggccctg tgtgccagca cctactcttt ttttttgaga cggagtcttg gctctgtcac 2340
ccaggctgga gtgcaatggc gtggtttcag ctcactgcaa cctccgcctc ccaggttcaa 2400
gcaattctcc tgcctcagcc tccctagtag ctgggactac acatgcgtgc caccacacct 2460
ggctaatttt tttttttgta tttttagtgg agatggggtt tcactatgtt ggccaggctg 2520
gtctcgaact cctgactttg tgatctgcct gcctcggcct cccaaagtgc tgggattaca 2580
gtcgtgagcc accgcaccca gccgcaccta ctcttttgta aagcacctgt gacaatgaag 2640
gacagattta tcaccttgac gattgtggtg atggggacct gatcccagca gtcacaggtc 2700
acaggggaag gtccctgctg aagacagacc tcagaagggc agttgatcca ggacccacac 2760
ctgctttctt cacgtttcct gatcctgccc tgggtctgca gtcacagttc aggaaacttc 2820
tctgggatcc aaaactagga ggttcctcta ggaccttatg gccctgcctc ctccctggcc 2880
cctcacagga cattttcttc caacaggtgg aaaaggaggg agctactcta aggctgagtg 2940
taagtgcggg gcgggagcgt ggaggagctc gcccacccta taattcctcc tgcaccacat 3000
ctcctgtggg ctctgaccag gtcttgtttt tgttctaccc cagggagcga cagtgcccag 3060
gggtctgagt ctcacagctt gtaaaggtga gattctgggg gtctgaagtg ggtggagggt 3120
ggggcagagg ggacaggact gggttgtggg gattttttga ttcagaattt ttgagtgtgt 3180
ggtgggctgt tcagagtgtc atcacttacc gtgactgacc tgaatttgtt catgactatt 3240
ttcttctgta gcctgagaca gctgccttgt gtgcgactga gatgcacagc tgccttgtgt 3300
gcgactgaga tgc 3313
//