Dbfetch
ID LR760222; SV 1; linear; genomic DNA; STD; HUM; 3882 BP.
XX
AC LR760222;
XX
PR Project:PRJEB36605;
XX
DT 09-FEB-2022 (Rel. 144, Created)
DT 09-FEB-2022 (Rel. 144, Last updated, Version 1)
XX
DE Homo sapiens, HLA-B gene for MHC class I antigen, cell line
DE Barretos_BAR374984_B_1, allele HLA-B*08:new
XX
KW .
XX
OS Homo sapiens (human)
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
XX
RN [1]
RA Cita F R., Stelet N V.;
RT ;
RL Submitted (05-FEB-2020) to the INSDC.
RL INSTITUTO NACIONAL DE CANCER JOSE ALENCAR GOMES DA SILVA, LABORATORIO DE
RL IMUNOGENETICA, 831 EQUADOR ST. SANTO CRISTO, RIO DE JANEIRO/RJ, Brazil
XX
DR MD5; 18a97888d1a95adc8422d47273b5c3a3.
XX
FH Key Location/Qualifiers
FH
FT source 1..3882
FT /organism="Homo sapiens"
FT /mol_type="genomic DNA"
FT /cell_line="Barretos_BAR374984_B_1"
FT /db_xref="taxon:9606"
FT exon 1..357
FT /gene="HLA-B"
FT /allele="HLA-B*08:new"
FT /number=1
FT CDS join(285..357,486..755,1002..1277,1850..2125,2219..2335,
FT 2777..2809,2916..2959)
FT /codon_start=1
FT /transl_table=1
FT /gene="HLA-B"
FT /allele="HLA-B*08:new"
FT /product="MHC class I antigen"
FT /function="antigen presenting molecule"
FT /protein_id="CAA9194170.1"
FT /translation="MLVMAPRTVLLLLSAALALTETWAGSHSMRYFDTAMSRPGRGEPR
FT FISVGYVDDTQFVRFDSDAASPREEPRAPWIEQEGPEYWDRNTQIFKTNTQTDRESLRN
FT LRGYYNQSEAGSHTLQSMYGCDVGPDGRLLRGHNQYAYDGKDYIALNEDLRSWTAADTA
FT AQITQRKWEAARVAEQDRAYLEGTCVEWLRRYLENGKDTLERADPPKTHVTHHPISDHE
FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRY
FT TCHVQHEGLPKPLTLRWEPSSQSTVPIVGIVAGLAVLAVVVIGAVVAAVMCRRKSSGGK
FT GGSYSQAACSDSAQGSDVSLTA"
FT intron 358..485
FT /gene="HLA-B"
FT /allele="HLA-B*08:new"
FT /number=1
FT exon 486..755
FT /gene="HLA-B"
FT /allele="HLA-B*08:new"
FT /number=2
FT intron 756..1001
FT /gene="HLA-B"
FT /allele="HLA-B*08:new"
FT /number=2
FT exon 1002..1277
FT /gene="HLA-B"
FT /allele="HLA-B*08:new"
FT /number=3
FT intron 1278..1849
FT /gene="HLA-B"
FT /allele="HLA-B*08:new"
FT /number=3
FT exon 1850..2125
FT /gene="HLA-B"
FT /allele="HLA-B*08:new"
FT /number=4
FT intron 2126..2218
FT /gene="HLA-B"
FT /allele="HLA-B*08:new"
FT /number=4
FT exon 2219..2335
FT /gene="HLA-B"
FT /allele="HLA-B*08:new"
FT /number=5
FT intron 2336..2776
FT /gene="HLA-B"
FT /allele="HLA-B*08:new"
FT /number=5
FT exon 2777..2809
FT /gene="HLA-B"
FT /allele="HLA-B*08:new"
FT /number=6
FT intron 2810..2915
FT /gene="HLA-B"
FT /allele="HLA-B*08:new"
FT /number=6
FT exon 2916..3882
FT /gene="HLA-B"
FT /allele="HLA-B*08:new"
FT /number=7
XX
SQ Sequence 3882 BP; 725 A; 1102 C; 1191 G; 864 T; 0 other;
gatcaggacg aagtcccagg tcccggacgg ggctctcagg gtctcaggct ccgagggccg 60
cgtctgcaat ggggaggcgc agcgttgggg attccccact cccctgagtt tcacttcttc 120
tcccaacttg tgtcgggtcc ttcttccagg atactcgtga cgcatcccca cttcccactc 180
ccattgggtg tcggatatct agagaagcca atcagcgtcg ccggggtccc agttctaaag 240
tccccacgca cccacccgga ctcagagtct cctcagacgc cgagatgctg gtcatggcgc 300
cccgaaccgt cctcctgctg ctctcggcgg ccctggccct gaccgagacc tgggccggtg 360
agtgcgggtc gggagggaaa tggcctctgc cgggaggagc gaggggaccg caggcggggg 420
cgcaggacct gaggagccgc gccgggagga gggtcgggcg ggtctcagcc cctcctcgcc 480
cccaggctcc cactccatga ggtatttcga caccgccatg tcccggcccg gccgcgggga 540
gccccgcttc atctcagtgg gctacgtgga cgacacgcag ttcgtgaggt tcgacagcga 600
cgccgcgagt ccgagagagg agccgcgggc gccgtggata gagcaggagg ggccggagta 660
ttgggaccgg aacacacaga tcttcaagac caacacacag actgaccgag agagcctgcg 720
gaacctgcgc ggctactaca accagagcga ggccggtgag tgaccccggc ccggggcgca 780
ggtcacgact ccccatcccc cacggacggc ccgggtcgcc ccgagtctcc gggtccgaga 840
tccgcctccc tgaggccgcg ggacccgccc agaccctcga ccggcgagag ccccaggcgc 900
gtttacccgg tttcattttc agttgaggcc aaaatccccg cgggttggtc ggggcggggc 960
ggggctcggg gggacggggc tgaccgcggg gccggggcca gggtctcaca ccctccagag 1020
catgtacggc tgcgacgtgg ggccggacgg gcgcctcctc cgcgggcata accagtacgc 1080
ctacgacggc aaggattaca tcgccctgaa cgaggacctg cgctcctgga ccgcggcgga 1140
caccgcggct cagatcaccc agcgcaagtg ggaggcggcc cgtgtggcgg agcaggacag 1200
agcctacctg gagggcacgt gcgtggagtg gctccgcaga tacctggaga acgggaagga 1260
cacgctggag cgcgcgggta ccaggggcag tggggagcct tccccatctc ctataggtcg 1320
ccggggatgg cctcccacga gaagaggagg aaaatgggat cagcgctaga atgtcgccct 1380
cccttgaatg gagaatggca tgagttttcc tgagtttcct ctgagggccc cctcttctct 1440
ctagacaatt aagggatgac gtctctgagg aaatggaggg gaagacagtc cctagaatac 1500
tgatcagggg tcccctttga cccctgcagc agccttggga accgtgactt ttcctctcag 1560
gccttgttct ctgcctcaca ctcagtgtgt ttggggctct gattccagca cttctgagtc 1620
actttacctc cactcagatc aggagcagaa gtccctgttc cccgctcaga gactcgaact 1680
ttccaatgaa taggagatta tcccaggtgc ctgcatccgc tggtgtctgg gttctgtgcc 1740
ccttccccac cccaggtgtc ctgtccattc tcaggctggt cacatgggtg gtcctagggt 1800
gtgccatgag agatgcaaag cgcctgaatt ttctgactct tcccatcaga ccccccaaag 1860
acacacgtga cccaccaccc catctctgac catgaggcca ccctgaggtg ctgggccctg 1920
ggcttctacc ctgcggagat cacactgacc tggcagcggg atggcgagga ccaaactcag 1980
gacactgagc ttgtggagac cagaccagca ggagatagaa ccttccagaa gtgggcagct 2040
gtggtggtgc cttctggaga agagcagaga tacacatgcc atgtacagca tgaggggctg 2100
ccgaagcccc tcaccctgag atggggtaag gagggggatg aggggtcata tctcttctca 2160
gggaaagcag gagcccttca gcagggtcag ggcccctcat cttcccctcc tttcccagag 2220
ccgtcttccc agtccaccgt ccccatcgtg ggcattgttg ctggcctggc tgtcctagca 2280
gttgtggtca tcggagctgt ggtcgctgct gtgatgtgta ggaggaagag ctcaggtagg 2340
gaaggggtga ggggtggggt ctgggttttc ttgtcccact gggggtttca agccccaggt 2400
agaagtgttc cctgcctcat tactgggatg cagcatccac acaggggcta acgcagcctg 2460
ggaccctgtg tgccagcact tactcttttg tgcagcacat gtgacaatga aggacggatg 2520
tatcaccttg gtggttgtgg tgttggggtc ctgattccag cattcatgag tcaggggaag 2580
gtccctgcta aggacagacc ttaggagggc agttggtcca ggacccacac ttgctttcct 2640
cgtgtttcct gatcctgcct tgggtctgta gtcatacttc tggaaattcc ttttgggtcc 2700
aagacgagga ggttcctcta agatctcatg gccctgcttc ctcccagtcc cctcacaggg 2760
cattttcttc ccacaggtgg aaaaggaggg agctactctc aggctgcgtg taagtgatgg 2820
gggtgggagt gtggaggagc tcacccaccc cataattcct cctgtcccac gtctcctgcg 2880
ggctctgacc aggtcctgtt tttgttctac tccaggcagc gacagtgccc agggctctga 2940
tgtgtctctc acagcttgaa aaggtgagat tcttggggtc tagagtgggt ggggtggcgg 3000
gtctgggggt gggtggggca gtggggaaag gcctgggtaa tggagattct ttgattggga 3060
tgtttcgcgt gtgtggtggg ctgtttagag tgtcatcact taccatgact aaccagaatt 3120
tgttcatgac tgttgttttc tgtagcctga gacagctgtc ttgtgaggga ctgagatgca 3180
ggatttcttc acgcctcccc tttgtgactt caagagcctc tggcatctct ttctgcaaag 3240
gcacctgaat gtgtctgcgt ccctgttagc ataatgtgag gaggtggaga gacagcccac 3300
ccttgtgtcc actgtgaccc ctgttcccat gctgacctgt gtttcctccc cagtcatctt 3360
tcttgttcca gagaggtggg gctggatgtc tccatctctg tctcaacttt atgtgcactg 3420
agctgcaact tcttacttcc ctactgaaaa taagaatctg aatataaatt tgttttctca 3480
aatatttgct atgagaggtt gatggattaa ttaaataagt caattcctgg aatttgagag 3540
agcaaataaa gacctgagaa ccttccagaa tctgcatgtt cgctgtgctg agtctgttgc 3600
aggtggggtg tggagaaggc tgtggggggc cgagtgtgga cggggcctgt gcccatttgg 3660
tgttgagtcc atcatgggct ttatgtggtt agtcctcagc tgggtcacct tcactgctcc 3720
attgtccttg tcccttcagt ggaaacttgt ccagtgggag ctgtgaccac agaggctcac 3780
acatcgccct gggcggcccc tgcacacggg ggtctctgtg cattctgaga caaattttca 3840
gagccattca cctcctgccc tgcttctaga gctccttttc tg 3882
//