Dbfetch
ID KY419441; SV 1; linear; genomic DNA; STD; HUM; 3121 BP.
XX
AC KY419441;
XX
DT 26-AUG-2017 (Rel. 133, Created)
DT 26-AUG-2017 (Rel. 133, Last updated, Version 1)
XX
DE Homo sapiens MHC class I antigen (HLA) gene, HLA-A*11:New allele, complete
DE cds.
XX
KW .
XX
OS Homo sapiens (human)
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
XX
RN [1]
RP 1-3121
RA Balz V., Krause S., Enczmann J., Fischer J.;
RT "More than 130 novel variants of HLA class 1 genes detected in German Stem
RT Cell Donor Registry and Terasaki samples";
RL Unpublished.
XX
RN [2]
RP 1-3121
RA Balz V., Krause S., Enczmann J., Fischer J.;
RT ;
RL Submitted (02-JAN-2017) to the INSDC.
RL University Hospital Duesseldorf, Institute for Transplantation Diagnostics
RL and Cell Therapeutics, Medical Faculty, Moorenstr. 5, Duesseldorf, NRW
RL 40225, Germany
XX
DR MD5; af5c572ebb32b45db91bb63e867eb783.
DR IMGT/HLA; HLA-A*11:261; HLA16673.
XX
CC ##Assembly-Data-START##
CC Assembly Method :: NGSengine v. 2.4.0
CC Sequencing Technology :: Illumina
CC ##Assembly-Data-END##
XX
FH Key Location/Qualifiers
FH
FT source 1..3121
FT /organism="Homo sapiens"
FT /chromosome="6"
FT /map="6p21.3"
FT /mol_type="genomic DNA"
FT /db_xref="taxon:9606"
FT gene <1..>3121
FT /gene="HLA"
FT /allele="HLA-A*11:New"
FT mRNA join(<1..209,340..609,851..1126,1706..1981,2084..2200,
FT 2643..2675,2818..2865,3035..>3121)
FT /gene="HLA"
FT /allele="HLA-A*11:New"
FT /product="MHC class I antigen"
FT exon <1..209
FT /gene="HLA"
FT /allele="HLA-A*11:New"
FT /number=1
FT 5'UTR <1..136
FT /gene="HLA"
FT /allele="HLA-A*11:New"
FT CDS join(137..209,340..609,851..1126,1706..1981,2084..2200,
FT 2643..2675,2818..2865,3035..3039)
FT /codon_start=1
FT /gene="HLA"
FT /allele="HLA-A*11:New"
FT /product="MHC class I antigen"
FT /db_xref="GOA:A0A223PYB8"
FT /db_xref="InterPro:IPR001039"
FT /db_xref="InterPro:IPR003006"
FT /db_xref="InterPro:IPR003597"
FT /db_xref="InterPro:IPR007110"
FT /db_xref="InterPro:IPR010579"
FT /db_xref="InterPro:IPR011161"
FT /db_xref="InterPro:IPR011162"
FT /db_xref="InterPro:IPR013783"
FT /db_xref="InterPro:IPR036179"
FT /db_xref="InterPro:IPR037055"
FT /db_xref="UniProtKB/TrEMBL:A0A223PYB8"
FT /protein_id="ASU50332.1"
FT /translation="MAVMAPRTLLLLLSGALALTQTWAGSHSMRYFYTSVSRPGRGEPR
FT FIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGT
FT LRGYYNQSEDGSHTIQIMYGCDVGPDGRFLRGYRQDAYDGKDYFALNEDLRSWTAADMA
FT AQITKRKWEAAHAAEQQRAYLEGRCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHE
FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRY
FT TCHVQHEGLPKPLTLRWELSSQPTIPIVGIIAGLVLLGAVITGAVVAAVMWRRKSSDRK
FT GGSYTQAASSDSAQGSDVSLTACKV"
FT exon 340..609
FT /gene="HLA"
FT /allele="HLA-A*11:New"
FT /number=2
FT exon 851..1126
FT /gene="HLA"
FT /allele="HLA-A*11:New"
FT /number=3
FT exon 1706..1981
FT /gene="HLA"
FT /allele="HLA-A*11:New"
FT /number=4
FT exon 2084..2200
FT /gene="HLA"
FT /allele="HLA-A*11:New"
FT /number=5
FT exon 2643..2675
FT /gene="HLA"
FT /allele="HLA-A*11:New"
FT /number=6
FT exon 2818..2865
FT /gene="HLA"
FT /allele="HLA-A*11:New"
FT /number=7
FT exon 3035..>3121
FT /gene="HLA"
FT /allele="HLA-A*11:New"
FT /number=8
FT 3'UTR 3040..>3121
FT /gene="HLA"
FT /allele="HLA-A*11:New"
XX
SQ Sequence 3121 BP; 600 A; 897 C; 966 G; 658 T; 0 other;
gatactcacg acgcggaccc agttctcact cccattgggt gtcgggtttc cagagaagcc 60
aatcagtgtc ttcgcggtcg ctcttctaaa gtccgcacgc acccaccggg actcagattc 120
tccccagacc ccgaggatgg ccgtcatggc gccccgaacc ctcctcctgc tactctcggg 180
ggccctggcc ctgacccaga cctgggcggg tgagtgcggg gtcgggaggg aaaccgcctc 240
tgcggggaga agcaaggggc cctcctggcg ggggcgcagg accgggggag ccgcgccggg 300
aggagggtcg ggcaggtctc agccactgct cgcccccagg ctcccactcc atgaggtatt 360
tctacacctc cgtgtcccgg cccggccgcg gggagccccg cttcatcgcc gtgggctacg 420
tggacgacac gcagttcgtg cggttcgaca gcgacgccgc gagccagagg atggagccgc 480
gggcgccgtg gatagagcag gaggggccgg agtattggga ccaggagaca cggaatgtga 540
aggcccagtc acagactgac cgagtggacc tggggaccct gcgcggctac tacaaccaga 600
gcgaggacgg tgagtgaccc cggcccgggg cgcaggtcac gacccctcat cccccacgga 660
cgggccaggt ggcccacagt ctccgggtcc gagatccacc ccgaagccgc gggaccccga 720
gacccttgcc ccgggagagg cccaggcgcc tttacccggt ttcattttca gtttaggcca 780
aaaatccccc cgggttggtc ggggccgggc agggcttggg ggactgggct gaccgcgggg 840
tcggggccag gttctcacac catccagata atgtatggct gcgacgtggg gccggacggg 900
cgcttcctcc gcgggtaccg gcaggacgcc tacgacggca aggattactt cgccctgaac 960
gaggacctgc gctcttggac cgcggcggac atggcagctc agatcaccaa gcgcaagtgg 1020
gaggcggccc atgcggcgga gcagcagaga gcctacctgg agggccggtg cgtggagtgg 1080
ctccgcagat acctggagaa cgggaaggag acgctgcagc gcacgggtac caggggccac 1140
ggggcgcctc cctgatcgcc tatagatctc ccgggctggc ctcccacaag gaggggagac 1200
aattgggacc aacactagaa tatcaccctc cctctggtcc tgagggagag gaatcctcct 1260
gggtttccag atcctgtacc agagagtgac tctgaggttc cgccctgctc tctgacacaa 1320
ttaagggata aaatctctga aggagtgacg ggaagacgat ccctcgaata ctgatgagtg 1380
gttccctttg acaccggcag cagccttggg cccgtgactt ttcctctcag gccttgttct 1440
ctgcttcaca ctcaatgtgt gtgggggtct gagtccagca cttctgagtc tctcagcctc 1500
cactcaggtc aggaccagaa gtcgctgttc ccttctcagg gaatagaaga ttatcccagg 1560
tgcctgtgtc caggctggtg tctgggttct gtgctctctt ccccatcccg ggtgtcctgt 1620
ccattctcaa gatggccaca tgcgtgctgg tggagtgtcc catgacagat gcaaaatgcc 1680
tgaattttct gactcttccc gtcagacccc cccaagacac atatgaccca ccaccccatc 1740
tctgaccatg aggccaccct gaggtgctgg gccctgggct tctaccctgc ggagatcaca 1800
ctgacctggc agcgggatgg ggaggaccag acccaggaca cggagctcgt ggagaccagg 1860
cctgcagggg atggaacctt ccagaagtgg gcggctgtgg tggtgccttc tggagaggag 1920
cagagataca cctgccatgt gcagcatgag ggtctgccca agcccctcac cctgagatgg 1980
ggtaaggagg gagatggggg tgtcatgtct cttagggaaa gcaggagcct ctctggagac 2040
ctttagcagg gtcagggccc ctcaccttcc cctcttttcc cagagctgtc ttcccagccc 2100
accatcccca tcgtgggcat cattgctggc ctggttctcc ttggagctgt gatcactgga 2160
gctgtggtcg ctgccgtgat gtggaggagg aagagctcag gtggagaagg ggtgaaaggt 2220
ggggtctgag atttcttgtc tcactgaggg ttccaagccc cagctagaaa tgtgccctgt 2280
ctcattactg ggaagcacct tccacaatca tgggccgacc cagcctgggc cctgtgtgcc 2340
agcacttact cttttgtaaa gcacctgtta aaatgaagga cagatttatc accttgatta 2400
cggcggtgat gggacctgat accagcagtc acaagtcaca ggggaaggtc cctgaggaca 2460
gacctcagga gggctattgg tccaggaccc acacctgctt tcttcatgtt tcctgatccc 2520
gccctgggtc tgcagtcaca catttctgga aacttctctg gggtccaaga ctaggaggtt 2580
cctctaggac cttaaggccc tggctccttt ctggtatctc acaggacatt ttcttcccac 2640
agatagaaaa ggagggagtt acactcaggc tgcaagtaag tatgaaggag gctgatgcct 2700
gaggtccttg ggatattgtg tttgggagcc catgggggag ctcacccacc ccacaattcc 2760
tcctctagcc acatcttctg tgggatctga ccaggttctg tttttgttct accccaggca 2820
gtgacagtgc ccagggctct gatgtgtctc tcacagcttg taaaggtgag agcttggagg 2880
gcctgatgtg tgttgggtgt tgggcggaac agtggacaca gctgtgctat ggggtttctt 2940
tgcattggat gtattgagca tgcgatgggc tgtttaaggt gtgacccctc actgtgatgg 3000
atatgaattt gttcatgaat atttttttct atagtgtgag acagctgcct tgtgtgggac 3060
tgagaggcaa gagttgttcc tgcccttccc tttgtgactt gaagaaccct gactttgttt 3120
c 3121
//