Dbfetch
ID KY419440; SV 1; linear; genomic DNA; STD; HUM; 3121 BP. XX AC KY419440; XX DT 26-AUG-2017 (Rel. 133, Created) DT 26-AUG-2017 (Rel. 133, Last updated, Version 1) XX DE Homo sapiens MHC class I antigen (HLA) gene, HLA-A*11:01:01New2 allele, DE complete cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3121 RA Balz V., Krause S., Enczmann J., Fischer J.; RT "More than 130 novel variants of HLA class 1 genes detected in German Stem RT Cell Donor Registry and Terasaki samples"; RL Unpublished. XX RN [2] RP 1-3121 RA Balz V., Krause S., Enczmann J., Fischer J.; RT ; RL Submitted (02-JAN-2017) to the INSDC. RL University Hospital Duesseldorf, Institute for Transplantation Diagnostics RL and Cell Therapeutics, Medical Faculty, Moorenstr. 5, Duesseldorf, NRW RL 40225, Germany XX DR MD5; e517d9ab34fc5e2f167da3e6936abf27. DR IMGT/HLA; HLA-A*11:01:01:05; HLA16664. XX CC ##Assembly-Data-START## CC Assembly Method :: NGSengine v. 2.4.0 CC Sequencing Technology :: Illumina CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..3121 FT /organism="Homo sapiens" FT /chromosome="6" FT /map="6p21.3" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene <1..>3121 FT /gene="HLA" FT /allele="HLA-A*11:01:01New2" FT mRNA join(<1..209,340..609,851..1126,1706..1981,2084..2200, FT 2643..2675,2818..2865,3035..>3121) FT /gene="HLA" FT /allele="HLA-A*11:01:01New2" FT /product="MHC class I antigen" FT exon <1..209 FT /gene="HLA" FT /allele="HLA-A*11:01:01New2" FT /number=1 FT 5'UTR <1..136 FT /gene="HLA" FT /allele="HLA-A*11:01:01New2" FT CDS join(137..209,340..609,851..1126,1706..1981,2084..2200, FT 2643..2675,2818..2865,3035..3039) FT /codon_start=1 FT /gene="HLA" FT /allele="HLA-A*11:01:01New2" FT /product="MHC class I antigen" FT /db_xref="GOA:Q5S3G3" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:Q5S3G3" FT /protein_id="ASU50331.1" FT /translation="MAVMAPRTLLLLLSGALALTQTWAGSHSMRYFYTSVSRPGRGEPR FT FIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGT FT LRGYYNQSEDGSHTIQIMYGCDVGPDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMA FT AQITKRKWEAAHAAEQQRAYLEGRCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHE FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPKPLTLRWELSSQPTIPIVGIIAGLVLLGAVITGAVVAAVMWRRKSSDRK FT GGSYTQAASSDSAQGSDVSLTACKV" FT exon 340..609 FT /gene="HLA" FT /allele="HLA-A*11:01:01New2" FT /number=2 FT exon 851..1126 FT /gene="HLA" FT /allele="HLA-A*11:01:01New2" FT /number=3 FT exon 1706..1981 FT /gene="HLA" FT /allele="HLA-A*11:01:01New2" FT /number=4 FT exon 2084..2200 FT /gene="HLA" FT /allele="HLA-A*11:01:01New2" FT /number=5 FT exon 2643..2675 FT /gene="HLA" FT /allele="HLA-A*11:01:01New2" FT /number=6 FT exon 2818..2865 FT /gene="HLA" FT /allele="HLA-A*11:01:01New2" FT /number=7 FT exon 3035..>3121 FT /gene="HLA" FT /allele="HLA-A*11:01:01New2" FT /number=8 FT 3'UTR 3040..>3121 FT /gene="HLA" FT /allele="HLA-A*11:01:01New2" XX SQ Sequence 3121 BP; 602 A; 896 C; 966 G; 657 T; 0 other; gatactcacg acgcggaccc agttctcact cccattgggt gtcgggtttc cagagaagcc 60 aatcagtgtc ttcgcggtcg ctcttctaaa gtccgcacgc acccaccggg actcagattc 120 tccccagacc ccgaggatgg ccgtcatggc gccccgaacc ctcctcctgc tactctcggg 180 ggccctggcc ctgacccaga cctgggcggg tgagtgcggg gtcgggaggg aaaccgcctc 240 tgcggggaga agcaaggggc cctcctggcg ggggcgcagg accgggggag ccgcgccggg 300 aggagggtcg ggcaggtctc agccactgct cgcccccagg ctcccactcc atgaggtatt 360 tctacacctc cgtgtcccgg cccggccgcg gggagccccg cttcatcgcc gtgggctacg 420 tggacgacac gcagttcgtg cggttcgaca gcgacgccgc gagccagagg atggagccgc 480 gggcgccgtg gatagagcag gaggggccgg agtattggga ccaggagaca cggaatgtga 540 aggcccagtc acagactgac cgagtggacc tggggaccct gcgcggctac tacaaccaga 600 gcgaggacgg tgagtgaccc cggccagggg cgcaggtcac gacccctcat cccccacgga 660 cgggccaggt ggcccacagt ctccgggtcc gagatccacc ccgaagccgc gggaccccga 720 gacccttgcc ccgggagagg cccaggcgcc tttacccggt ttcattttca gtttaggcca 780 aaaatccccc cgggttggtc ggggccgggc agggcttggg ggactgggct gaccgcgggg 840 tcggggccag gttctcacac catccagata atgtatggct gcgacgtggg gccggacggg 900 cgcttcctcc gcgggtaccg gcaggacgcc tacgacggca aggattacat cgccctgaac 960 gaggacctgc gctcttggac cgcggcggac atggcagctc agatcaccaa gcgcaagtgg 1020 gaggcggccc atgcggcgga gcagcagaga gcctacctgg agggccggtg cgtggagtgg 1080 ctccgcagat acctggagaa cgggaaggag acgctgcagc gcacgggtac caggggccac 1140 ggggcgcctc cctgatcgcc tatagatctc ccgggctggc ctcccacaag gaggggagac 1200 aattgggacc aacactagaa tatcaccctc cctctggtcc tgagggagag gaatcctcct 1260 gggtttccag atcctgtacc agagagtgac tctgaggttc cgccctgctc tctgacacaa 1320 ttaagggata aaatctctga aggagtgacg ggaagacgat ccctcgaata ctgatgagtg 1380 gttccctttg acaccggcag cagccttggg cccgtgactt ttcctctcag gccttgttct 1440 ctgcttcaca ctcaatgtgt gtgggggtct gagtccagca cttctgagtc tctcagcctc 1500 cactcaggtc aggaccagaa gtcgctgttc ccttctcagg gaatagaaga ttatcccagg 1560 tgcctgtgtc caggctggtg tctgggttct gtgctctctt ccccatcccg ggtgtcctgt 1620 ccattctcaa gatggccaca tgcgtgctgg tggagtgtcc catgacagat gcaaaatgcc 1680 tgaattttct gactcttccc gtcagacccc cccaagacac atatgaccca ccaccccatc 1740 tctgaccatg aggccaccct gaggtgctgg gccctgggct tctaccctgc ggagatcaca 1800 ctgacctggc agcgggatgg ggaggaccag acccaggaca cggagctcgt ggagaccagg 1860 cctgcagggg atggaacctt ccagaagtgg gcggctgtgg tggtgccttc tggagaggag 1920 cagagataca cctgccatgt gcagcatgag ggtctgccca agcccctcac cctgagatgg 1980 ggtaaggagg gagatggggg tgtcatgtct cttagggaaa gcaggagcct ctctggagac 2040 ctttagcagg gtcagggccc ctcaccttcc cctcttttcc cagagctgtc ttcccagccc 2100 accatcccca tcgtgggcat cattgctggc ctggttctcc ttggagctgt gatcactgga 2160 gctgtggtcg ctgccgtgat gtggaggagg aagagctcag gtggagaagg ggtgaaaggt 2220 ggggtctgag atttcttgtc tcactgaggg ttccaagccc cagctagaaa tgtgccctgt 2280 ctcattactg ggaagcacct tccacaatca tgggccgacc cagcctgggc cctgtgtgcc 2340 agcacttact cttttgtaaa gcacctgtta aaatgaagga cagatttatc accttgatta 2400 cggcggtgat gggacctgat accagcagtc acaagtcaca ggggaaggtc cctgaggaca 2460 gacctcagga gggctattgg tccaggaccc acacctgctt tcttcatgtt tcctgatccc 2520 gccctgggtc tgcagtcaca catttctgga aacttctctg gggtccaaga ctaggaggtt 2580 cctctaggac cttaaggccc tggctccttt ctggtatctc acaggacatt ttcttcccac 2640 agatagaaaa ggagggagtt acactcaggc tgcaagtaag tatgaaggag gctgatgcct 2700 gaggtccttg ggatattgtg tttgggagcc catgggggag ctcacccacc ccacaattcc 2760 tcctctagcc acatcttctg tgggatctga ccaggttctg tttttgttct accccaggca 2820 gtgacagtgc ccagggctct gatgtgtctc tcacagcttg taaaggtgag agcttggagg 2880 gcctgatgtg tgttgggtgt tgggcggaac agtggacaca gctgtgctat ggggtttctt 2940 tgcattggat gtattgagca tgcgatgggc tgtttaaggt gtgacccctc actgtgatgg 3000 atatgaattt gttcatgaat atttttttct atagtgtgag acagctgcct tgtgtgggac 3060 tgagaggcaa gagttgttcc tgcccttccc tttgtgactt gaagaaccct gactttgttt 3120 c 3121 //