ID KP716820; SV 1; linear; genomic DNA; STD; HUM; 1022 BP.
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AC KP716820;
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DT 05-NOV-2015 (Rel. 126, Created)
DT 05-NOV-2015 (Rel. 126, Last updated, Version 1)
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DE Homo sapiens isolate 1794582 MHC class II antigen (HLA) gene, HLA-B*58
DE allele, partial cds.
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KW .
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OS Homo sapiens (human)
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
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RN [1]
RP 1-1022
RA Zuo J.;
RT "A novel allele HLA-B*58 identified by SBT";
RL Unpublished.
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RN [2]
RP 1-1022
RA Zuo J.;
RT ;
RL Submitted (26-JAN-2015) to the INSDC.
RL HLA Lab, Taiyuan Red Cross Blood Center, No. 185 Taiyuan Yingze West
RL Street, Taiyuan, Shanxi 030024, China
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DR MD5; 41442bd48c3b80f1142f4317b9d89a50.
DR IMGT/HLA; HLA-B*58:71; HLA13233.
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CC ##Assembly-Data-START##
CC Sequencing Technology :: Sanger dideoxy sequencing
CC ##Assembly-Data-END##
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FH Key Location/Qualifiers
FH
FT source 1..1022
FT /organism="Homo sapiens"
FT /isolate="1794582"
FT /mol_type="genomic DNA"
FT /db_xref="taxon:9606"
FT gene <1..>1022
FT /gene="HLA"
FT /allele="HLA-B*58"
FT mRNA join(<1..270,371..646,747..>1022)
FT /gene="HLA"
FT /allele="HLA-B*58"
FT /product="MHC class II antigen"
FT CDS join(<1..270,371..646,747..>1022)
FT /codon_start=3
FT /gene="HLA"
FT /allele="HLA-B*58"
FT /product="MHC class II antigen"
FT /db_xref="InterPro:IPR001039"
FT /db_xref="InterPro:IPR003006"
FT /db_xref="InterPro:IPR003597"
FT /db_xref="InterPro:IPR007110"
FT /db_xref="InterPro:IPR011161"
FT /db_xref="InterPro:IPR011162"
FT /db_xref="InterPro:IPR013783"
FT /db_xref="InterPro:IPR036179"
FT /db_xref="InterPro:IPR037055"
FT /db_xref="UniProtKB/TrEMBL:A0A0N9QV62"
FT /protein_id="ALH21907.1"
FT /translation="SHSMRYFYTAMSRPGRGEPRFIAVGYVDDTQFVRFDSDAASPRTE
FT PRAPWIEQEGPEYWDGETRNMKASAQTYRENLRIALRYYNQSEAGSHIIQRMYGCDLGP
FT DGRLLRGHDQSAYDGKDYIALNEDLSSWTAADTAAQITQRKWEAARVAEQLRAYLEGLC
FT VEWLRRYLENGKETLQRADPPKTHVTHHPVSDHEATLRCWALGFYPAEITPTWQRDGED
FT QTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRW"
FT gap 271..370
FT /estimated_length=unknown
FT gap 647..746
FT /estimated_length=unknown
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SQ Sequence 1022 BP; 174 A; 258 C; 276 G; 114 T; 200 other;
gctcccactc catgaggtat ttctacaccg ccatgtcccg gcccggccgc ggggagcccc 60
gcttcatcgc agtgggctac gtggacgaca cccagttcgt gaggttcgac agcgacgccg 120
cgagtccgag gacggagccc cgggcgccat ggatagagca ggaggggccg gagtattggg 180
acggggagac acggaacatg aaggcctccg cgcagactta ccgagagaac ctgcggatcg 240
cgctccgcta ctacaaccag agcgaggccg nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 300
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 360
nnnnnnnnnn ggtctcacat catccagagg atgtatggct gcgacctggg gcccgacggg 420
cgcctcctcc gcgggcatga ccagtccgcc tacgacggca aggattacat cgccctgaac 480
gaggacctga gctcctggac cgcggcggac accgcggctc agatcaccca gcgcaagtgg 540
gaggcggccc gtgtggcgga gcagctgaga gcctacctgg agggcctgtg cgtggagtgg 600
ctccgcagat acctggagaa cgggaaggag acgctgcagc gcgcggnnnn nnnnnnnnnn 660
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 720
nnnnnnnnnn nnnnnnnnnn nnnnnnaccc cccaaagaca cacgtgaccc accaccccgt 780
ctctgaccat gaggccaccc tgaggtgctg ggccctgggc ttctaccctg cggagatcac 840
accgacctgg cagcgggatg gcgaggacca aactcaggac actgagcttg tggagaccag 900
accagcagga gatagaacct tccagaagtg ggcagctgtg gtggtgcctt ctggagaaga 960
gcagagatac acatgccatg tacagcatga ggggctgccg aagcccctca ccctgagatg 1020
gg 1022
//