ID KF175424; SV 1; linear; genomic DNA; STD; HUM; 1022 BP.
XX
AC KF175424;
XX
DT 15-JUL-2013 (Rel. 117, Created)
DT 22-NOV-2013 (Rel. 118, Last updated, Version 2)
XX
DE Homo sapiens isolate D10074696 MHC class I antigen (HLA-C) gene,
DE HLA-C*03:04:39 allele, exons 2 through 4 and partial cds.
XX
KW .
XX
OS Homo sapiens (human)
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
XX
RN [1]
RP 1-1022
RA Li J., Qu J., Zhang C., Huang C., Tan J., Li Y., Tan Y., Ye K., Fang J.,
RA Yang X., Zhou M., Zeng H., Lan Z.;
RT "HLA-C novel alleles found by BGI in 2010 year";
RL Unpublished.
XX
RN [2]
RP 1-1022
RA Li J., Qu J., Zhang C., Huang C., Tan J., Li Y., Tan Y., Ye K., Fang J.,
RA Yang X., Zhou M., Zeng H., Lan Z.;
RT ;
RL Submitted (30-MAY-2013) to the INSDC.
RL Healthcare, BGI, third floor BGI second building Beishan industrial Zone
RL Beishan Beishan RoadYantian District, Shenzhen, Guangdong 518083, China
XX
DR MD5; df65cdd91c681e45568290583816fee3.
DR IMGT/HLA; HLA-C*03:04:39; HLA09977.
XX
CC ##Assembly-Data-START##
CC Sequencing Technology :: Sanger dideoxy sequencing
CC ##Assembly-Data-END##
XX
FH Key Location/Qualifiers
FH
FT source 1..1022
FT /organism="Homo sapiens"
FT /isolate="D10074696"
FT /mol_type="genomic DNA"
FT /db_xref="taxon:9606"
FT gene <1..>1022
FT /gene="HLA-C"
FT /allele="HLA-C*03:04:39"
FT mRNA join(<1..270,371..646,747..>1022)
FT /gene="HLA-C"
FT /allele="HLA-C*03:04:39"
FT /product="MHC class I antigen"
FT CDS join(<1..270,371..646,747..>1022)
FT /codon_start=3
FT /gene="HLA-C"
FT /allele="HLA-C*03:04:39"
FT /product="MHC class I antigen"
FT /db_xref="InterPro:IPR001039"
FT /db_xref="InterPro:IPR003006"
FT /db_xref="InterPro:IPR003597"
FT /db_xref="InterPro:IPR007110"
FT /db_xref="InterPro:IPR011161"
FT /db_xref="InterPro:IPR011162"
FT /db_xref="InterPro:IPR013783"
FT /db_xref="InterPro:IPR036179"
FT /db_xref="InterPro:IPR037055"
FT /db_xref="UniProtKB/TrEMBL:S5DN08"
FT /protein_id="AGQ16920.1"
FT /translation="SHSMRYFYTAVSRPGRGEPHFIAVGYVDDTQFVRFDSDAASPRGE
FT PRAPWVEQEGPEYWDRETQKYKRQAQTDRVSLRNLRGYYNQSEAGSHIIQRMYGCDVGP
FT DGRLLRGYDQYAYDGKDYIALNEDLRSWTAADTAAQITQRKWEAAREAEQLRAYLEGLC
FT VEWLRRYLKNGKETLQRAEHPKTHVTHHPVSDHEATLRCWALGFYPAEITLTWQWDGED
FT QTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPLTLRW"
FT exon 1..270
FT /gene="HLA-C"
FT /allele="HLA-C*03:04:39"
FT /number=2
FT gap 271..370
FT /estimated_length=unknown
FT exon 371..646
FT /gene="HLA-C"
FT /allele="HLA-C*03:04:39"
FT /number=3
FT gap 647..746
FT /estimated_length=unknown
FT exon 747..1022
FT /gene="HLA-C"
FT /allele="HLA-C*03:04:39"
FT /number=4
XX
SQ Sequence 1022 BP; 171 A; 244 C; 290 G; 117 T; 200 other;
gctcccactc catgaggtat ttctacaccg ctgtgtcccg gcccggccgc ggggagcccc 60
acttcatcgc agtgggctac gtggacgaca cgcagttcgt gcggttcgac agcgacgccg 120
cgagtccgag aggggagccg cgggcgccgt gggtggagca ggaggggccg gagtattggg 180
accgggagac acagaagtac aagcgccagg cacagactga ccgagtgagc ctgcggaacc 240
tgcgcggcta ctacaaccag agcgaggccg nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 300
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 360
nnnnnnnnnn ggtctcacat catccagagg atgtatggct gcgacgtggg gcccgacggg 420
cgcctgctcc gcgggtatga ccagtacgcc tacgacggca aggattacat cgccctgaac 480
gaggatctgc gctcctggac cgccgcggac acggcggctc agatcaccca gcgcaagtgg 540
gaggcggccc gtgaggcgga gcagctgaga gcctacctgg agggcctgtg cgtggagtgg 600
ctccgcagat acctgaagaa tgggaaggag acgctgcagc gcgcggnnnn nnnnnnnnnn 660
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 720
nnnnnnnnnn nnnnnnnnnn nnnnnnaaca cccaaagaca cacgtgaccc accatcccgt 780
ctctgaccat gaggccaccc tgaggtgctg ggccctgggc ttctaccctg cggagatcac 840
actgacctgg cagtgggatg gggaggacca aactcaggac actgagcttg tggagaccag 900
gccagcagga gatggaacct tccagaagtg ggcagctgtg gtggtgcctt ctggagaaga 960
gcagagatac acgtgccatg tgcagcacga ggggctgccg gagcccctca ccctgagatg 1020
gg 1022
//