ID KF160920; SV 1; linear; genomic DNA; STD; HUM; 1523 BP.
XX
AC KF160920;
XX
DT 22-SEP-2013 (Rel. 118, Created)
DT 22-SEP-2013 (Rel. 118, Last updated, Version 1)
XX
DE Homo sapiens isolate P07125 MHC class I antigen (HLA-C) gene, HLA-C*8
DE allele, partial cds.
XX
KW .
XX
OS Homo sapiens (human)
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
XX
RN [1]
RP 1-1523
RA Wang W., Zhang W., Han Z.D., Zhu F.M.;
RT "Two novel HLA alleles were identified by PCR-SBT";
RL Unpublished.
XX
RN [2]
RP 1-1523
RA Wang W., Zhang W., Han Z.D., Zhu F.M.;
RT ;
RL Submitted (29-MAY-2013) to the INSDC.
RL HLA Laboratory, Transfusion Institute, Blood Center of Zhejiang Province,
RL Wulin Road 345, Hangzhou, Zhejiang 310006, China
XX
DR MD5; b9891f49de4dbe24ae8cf70f86e62ecc.
DR IMGT/HLA; HLA-C*08:01:10; HLA09834.
XX
CC ##Assembly-Data-START##
CC Sequencing Technology :: Sanger dideoxy sequencing
CC ##Assembly-Data-END##
XX
FH Key Location/Qualifiers
FH
FT source 1..1523
FT /organism="Homo sapiens"
FT /isolate="P07125"
FT /mol_type="genomic DNA"
FT /db_xref="taxon:9606"
FT gene <1..>1523
FT /gene="HLA-C"
FT /allele="HLA-C*8"
FT mRNA join(<1..270,371..646,747..1022,1123..1242,1343..1375,
FT 1476..>1523)
FT /gene="HLA-C"
FT /allele="HLA-C*8"
FT /product="MHC class I antigen"
FT CDS join(<1..270,371..646,747..1022,1123..1242,1343..1375,
FT 1476..>1523)
FT /codon_start=3
FT /gene="HLA-C"
FT /allele="HLA-C*8"
FT /product="MHC class I antigen"
FT /db_xref="GOA:T2ETK5"
FT /db_xref="InterPro:IPR001039"
FT /db_xref="InterPro:IPR003006"
FT /db_xref="InterPro:IPR003597"
FT /db_xref="InterPro:IPR007110"
FT /db_xref="InterPro:IPR010579"
FT /db_xref="InterPro:IPR011161"
FT /db_xref="InterPro:IPR011162"
FT /db_xref="InterPro:IPR013783"
FT /db_xref="InterPro:IPR036179"
FT /db_xref="InterPro:IPR037055"
FT /db_xref="UniProtKB/TrEMBL:T2ETK5"
FT /protein_id="AGV68804.1"
FT /translation="SHSMRYFYTAVSRPGRGEPRFIAVGYVDDTQFVQFDSDAASPRGE
FT PRAPWVEQEGPEYWDRETQKYKRQAQTDRVSLRNLRGYYNQSEAGSHTLQRMYGCDLGP
FT DGRLLRGYNQFAYDGKDYIALNEDLRSWTAADTAAQITQRKWEAARTAEQLRAYLEGTC
FT VEWLRRYLENGKKTLQRAEHPKTHVTHHPVSDHEATLRCWALGFYPAEITLTWQRDGED
FT QTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPLTLRWGPSSQPTI
FT PIVGIVAGLAVLAVLAVLGAVMAVVMCRRKSSGGKGGSCSQAASSNSAQGSDESLIACK
FT "
FT variation 266
FT /gene="HLA-C"
FT /replace="g"
FT gap 271..370
FT /estimated_length=unknown
FT gap 647..746
FT /estimated_length=unknown
FT gap 1023..1122
FT /estimated_length=unknown
FT gap 1243..1342
FT /estimated_length=unknown
FT gap 1376..1475
FT /estimated_length=unknown
XX
SQ Sequence 1523 BP; 210 A; 308 C; 345 G; 160 T; 500 other;
gctcccactc catgaggtat ttctacaccg ccgtgtcccg gcccggccgc ggagagcccc 60
gcttcatcgc agtgggctac gtggacgaca cgcagttcgt gcagttcgac agcgacgccg 120
cgagtccaag aggggagccg cgggcgccgt gggtggagca ggaggggccg gagtattggg 180
accgggagac acagaagtac aagcgccagg cacagactga ccgagtgagc ctgcggaacc 240
tgcgcggcta ctacaaccag agcgaagccg nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 300
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 360
nnnnnnnnnn ggtctcacac cctccagagg atgtatggct gcgacctggg gcccgacggg 420
cgcctcctcc gcgggtataa ccagttcgcc tacgacggca aggattacat cgccctgaat 480
gaggacctgc gctcctggac cgccgcggac acggcggctc agatcaccca gcgcaagtgg 540
gaggcggccc gtacggcgga gcagctgaga gcctacctgg agggcacgtg cgtggagtgg 600
ctccgcagat acctggagaa cgggaagaag acgctgcagc gcgcggnnnn nnnnnnnnnn 660
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 720
nnnnnnnnnn nnnnnnnnnn nnnnnnaaca cccaaagaca cacgtgaccc accatcccgt 780
ctctgaccat gaggccaccc tgaggtgctg ggccctgggc ttctaccctg cggagatcac 840
actgacctgg cagcgggatg gcgaggacca aactcaggac accgagcttg tggagaccag 900
gccagcagga gatggaacct tccagaagtg ggcagctgtg gtggtgcctt ctggagaaga 960
gcagagatac acgtgccatg tgcagcacga ggggctgcca gagcccctca ccctgagatg 1020
ggnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1080
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnggccatct tcccagccca 1140
ccatccccat cgtgggcatc gttgctggcc tggctgtcct ggctgtccta gctgtcctag 1200
gagctgtgat ggctgttgtg atgtgtagga ggaagagctc agnnnnnnnn nnnnnnnnnn 1260
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1320
nnnnnnnnnn nnnnnnnnnn nngtggaaaa ggagggagct gctctcaggc tgcgtnnnnn 1380
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1440
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnccagc aacagtgccc agggctctga 1500
tgagtctctc atcgcttgta aag 1523
//