Dbfetch
ID HM157283; SV 1; linear; genomic DNA; STD; HUM; 2052 BP. XX AC HM157283; XX DT 03-AUG-2010 (Rel. 105, Created) DT 03-AUG-2010 (Rel. 105, Last updated, Version 1) XX DE Homo sapiens MHC class I protein (HLA-B) gene, HLA-B*48 variant allele, DE exons 1 through 5 and partial cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-2052 RA Hwang S.H., Kwon O.J., Kang J.E., Song E.J., Kim H.H.; RT "Novel HLA-B*48 allele identified by sequence-based typing"; RL Unpublished. XX RN [2] RP 1-2052 RA Hwang S.H., Kwon O.J., Kang J.E., Song E.J., Kim H.H.; RT ; RL Submitted (27-APR-2010) to the INSDC. RL Laboratory Medicine, Pusan National University Hospital, 1-10 Ami-dong RL Seo-gu, Busan 602-739, Republic of Korea XX DR MD5; ea077213d5b90fdc3de074a218dff37d. DR IMGT/HLA; HLA-B*48:01:03; HLA05376. XX FH Key Location/Qualifiers FH FT source 1..2052 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene <1..>2052 FT /gene="HLA-B" FT /allele="HLA-B*48 variant" FT mRNA join(<1..73,202..471,717..992,1567..1842,1936..>2052) FT /gene="HLA-B" FT /allele="HLA-B*48 variant" FT /product="MHC class I protein" FT CDS join(1..73,202..471,717..992,1567..1842,1936..>2052) FT /codon_start=1 FT /gene="HLA-B" FT /allele="HLA-B*48 variant" FT /product="MHC class I protein" FT /db_xref="GOA:D9ZNA7" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:D9ZNA7" FT /protein_id="ADK88901.1" FT /translation="MLVMAPRTVLLLLSAALALTETWAGSHSMRYFYTSVSRPGRGEPR FT FISVGYVDDTQFVRFDSDAASPREEPRAPWIEQEGPEYWDRETQISKTNTQTYRESLRN FT LRGYYNQSEAGSHTLQSMYGCDVGPDGRLLRGHNQYAYDGKDYIALNEDLRSWTAADTA FT AQISQRKLEAARVAEQLRAYLEGECVEWLRRYLENGKDKLERADPPKTHVTHHPISDHE FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWTAVVVPSGEEQRY FT TCHVQHEGLPKPLTLRWEPSSQSTVPIVGIVAGLAVLAVVVIGAVVAAVMCRRKSS" FT exon 1..73 FT /gene="HLA-B" FT /allele="HLA-B*48 variant" FT /number=1 FT exon 202..471 FT /gene="HLA-B" FT /allele="HLA-B*48 variant" FT /number=2 FT exon 717..992 FT /gene="HLA-B" FT /allele="HLA-B*48 variant" FT /number=3 FT exon 1567..1842 FT /gene="HLA-B" FT /allele="HLA-B*48 variant" FT /number=4 FT exon 1936..>2052 FT /gene="HLA-B" FT /allele="HLA-B*48 variant" FT /number=5 XX SQ Sequence 2052 BP; 385 A; 632 C; 662 G; 373 T; 0 other; atgctggtca tggcgccccg aaccgtcctc ctgctgctct cggcggccct ggccctgacc 60 gagacctggg ccggtgagtg cgggtcggga gggaaatggc ctctgccggg aggagcgagg 120 ggaccgcagg cgggggcgca ggacctgagg agccgcgccg ggaggagggt cgggcgggtc 180 tcagcccctc ctcaccccca ggctcccact ccatgaggta tttctacacc tccgtgtccc 240 ggcccggccg cggggagccc cgcttcatct cagtgggcta cgtggacgac acccagttcg 300 tgaggttcga cagcgacgcc gcgagtccga gagaggagcc gcgggcgccg tggatagagc 360 aggaggggcc ggagtattgg gaccgggaga cacagatctc caagaccaac acacagactt 420 accgagagag cctgcggaac ctgcgcggct actacaacca gagcgaggcc ggtgagtgac 480 cccggcccgg ggcgcaggtc acgactcccc atcccccacg tacggcccgg gtcgccccga 540 gtctccgggt ccgagatccg cctccctgag gccgcgggac ccgcccagac cctcgaccgg 600 cgagagcccc aggcgcgttt acccggtttc attttcagtt gaggccaaaa tccccgcggg 660 ttggtcgggg cggggcgggg ctcgggggac tgggctgacc gcggggccgg ggccagggtc 720 tcacaccctc cagagcatgt acggctgcga cgtggggccg gacgggcgcc tcctccgcgg 780 gcataaccag tacgcctacg acggcaagga ttacatcgcc ctgaacgagg acctgcgctc 840 ctggaccgcc gcggacacgg cggctcagat ctcccagcgc aagttggagg cggcccgtgt 900 ggcggagcag ctgagagcct acctggaggg cgagtgcgtg gagtggctcc gcagatacct 960 ggagaacggg aaggacaagc tggagcgcgc tggtaccagg ggcagtgggg agccttcccc 1020 atctcctata ggtcgccggg gatggcctcc cacgagaaga ggaggaaaat gggatcagcg 1080 ctagaatgtc gccctccgtt gaatggagaa tggcatgagt tttcctgagt ttcctctgag 1140 ggccccctct tctctctaga caattaagga atgacgtctc tgaggaaatg gaggggaaga 1200 cagtccctag aatactgatc aggggtcccc tttgacccct gcagcagcct tgggaaccgt 1260 gacttttcct ctcaggcctt gttctctgcc tcacactcag tgtgtttggg gctctgattc 1320 cagcacttct gagtcacttt acctccactc agatcaggag cagaagtccc tgttccccgc 1380 tcagagactc gaactttcca atgaatagga gattatccca ggtgcctgcg tccaggctgg 1440 tgtctgggtt ctgtgcccct tccccacccc aggtgtcctg tccattctca ggctggtcac 1500 atgggtggtc ctagggtgtc ccatgaaaga tgcaaagcgc ctgaattttc tgactcttcc 1560 catcagaccc cccaaagaca cacgtgaccc accaccccat ctctgaccat gaggccaccc 1620 tgaggtgctg ggccctgggt ttctaccctg cggagatcac actgacctgg cagcgggatg 1680 gcgaggacca aactcaggac actgagcttg tggagaccag accagcagga gatagaacct 1740 tccagaagtg gacagctgtg gtggtgcctt ctggagaaga gcagagatac acatgccatg 1800 tacagcatga ggggctgccg aagcctctca ccctgagatg gggtaaggag ggggatgagg 1860 ggtcatatct cttctcaggg aaagcaggag cccttcagca gggtcagggc ccctcatctt 1920 cccctccttt cccagagccg tcttcccagt ccaccgtccc catcgtgggc attgttgctg 1980 gcctggctgt cctagcagtt gtggtcatcg gagctgtggt cgctgctgtg atgtgtagga 2040 ggaagagttc ag 2052 //