ID FM992365; SV 1; linear; genomic DNA; STD; HUM; 904 BP.
XX
AC FM992365;
XX
DT 27-JAN-2009 (Rel. 99, Created)
DT 27-JAN-2009 (Rel. 99, Last updated, Version 1)
XX
DE Homo sapiens partial HLA-DPB1 gene for MHC class II antigen, allele
DE HLA-DPB1*0501new, exons 2-3
XX
KW .
XX
OS Homo sapiens (human)
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
XX
RN [1]
RP 1-904
RA Witter K.;
RT ;
RL Submitted (23-JAN-2009) to the INSDC.
RL Witter K., University of Munich, Laboratory of Immunogenetics,
RL Max-Lebsche-Platz 32, 81377 Munich, GERMANY.
XX
RN [2]
RA Witter K.;
RT "Confirmation of several HLA-DPB1 alleles including exon 3";
RL Unpublished.
XX
DR MD5; c4015620b9d898d3019d2d271c799311.
DR IMGT/HLA; HLA-DPB1*05:01:02; HLA03630.
XX
FH Key Location/Qualifiers
FH
FT source 1..904
FT /organism="Homo sapiens"
FT /mol_type="genomic DNA"
FT /db_xref="taxon:9606"
FT CDS join(<30..293,483..>764)
FT /codon_start=3
FT /gene="HLA-DPB1"
FT /allele="HLA-DPB1*0501new"
FT /product="MHC class II antigen"
FT /function="antigen presenting molecule"
FT /db_xref="GOA:B9W6F8"
FT /db_xref="InterPro:IPR000353"
FT /db_xref="InterPro:IPR003006"
FT /db_xref="InterPro:IPR003597"
FT /db_xref="InterPro:IPR007110"
FT /db_xref="InterPro:IPR011162"
FT /db_xref="InterPro:IPR013783"
FT /db_xref="InterPro:IPR014745"
FT /db_xref="InterPro:IPR036179"
FT /db_xref="UniProtKB/TrEMBL:B9W6F8"
FT /protein_id="CAX30406.1"
FT /translation="NYLFQGRQECYAFNGTQRFLERYIYNREELVRFDSDVGEFRAVTE
FT LGRPEAEYWNSQKDILEEKRAVPDRMCRHNYELDEAVTLQRRVQPKVNVSPSKKGPLQH
FT HNLLVCHVTDFYPGSIQVRWFLNGQEETAGVVSTNLIRNGDWTFQILVMLEMTPQQGDV
FT YICQVEHTSLDSPVTVEW"
FT exon 30..293
FT /gene="HLA-DPB1"
FT /allele="HLA-DPB1*0501new"
FT /number=2
FT intron join(294..>309,<452..482)
FT /gene="HLA-DPB1"
FT /allele="HLA-DPB1*0501new"
FT /number=2
FT gap 310..451
FT /estimated_length=142
FT exon 483..764
FT /gene="HLA-DPB1"
FT /allele="HLA-DPB1*0501new"
FT /number=3
XX
SQ Sequence 904 BP; 164 A; 223 C; 218 G; 157 T; 142 other;
ctccgctcat gtccgccccc tccccgcaga gaattacctt ttccagggac ggcaggaatg 60
ctacgcgttt aatgggacac agcgcttcct ggagagatac atctacaacc gggaggagct 120
cgtgcgcttc gacagcgacg tgggggagtt ccgggcggtg acggagctgg ggcggcctga 180
ggcggagtac tggaacagcc agaaggacat cctggaggag aagcgggcag tgccggacag 240
gatgtgcaga cacaactacg agctggacga ggccgtgacc ctgcagcgcc gaggtgagtg 300
agggctttgn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 360
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 420
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nctatttcat tattttcctt ccccactcgt 480
agtccagcct aaggtgaacg tttccccctc caagaagggg cccctgcagc accacaacct 540
gcttgtctgc cacgtgacag atttctaccc aggcagcatt caagtccgat ggttcctgaa 600
tggacaggag gaaacagctg gggtcgtgtc caccaacctg atccgtaatg gagactggac 660
cttccagatc ctggtgatgc tggaaatgac cccccagcag ggagatgtct acatctgcca 720
agtggagcac accagcctgg acagtcctgt caccgtggag tggagtgagt ctctgatgac 780
cgtctagacc ccacctctga agagcagggg actctctggc tctggggtcc actcatctta 840
tcttctgcat ctataccctg gggccatgtc caaaccccat ctttcttcta taccagctcc 900
tgag 904
//