Dbfetch
ID EU432087; SV 1; linear; mRNA; STD; MAM; 1186 BP. XX AC EU432087; XX DT 26-FEB-2008 (Rel. 94, Created) DT 17-APR-2011 (Rel. 108, Last updated, Version 2) XX DE Sus scrofa MHC class I antigen (SLA-2) mRNA, SLA-2*040202 allele, complete DE cds. XX KW . XX OS Sus scrofa (pig) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus. XX RN [1] RP 1-1186 RX DOI; 10.1111/j.1744-313X.2009.00853.x. RX PUBMED; 19508353. RA Ho C.S., Franzo-Romain M.H., Lee Y.J., Lee J.H., Smith D.M.; RT "Sequence-based characterization of swine leucocyte antigen alleles in RT commercially available porcine cell lines"; RL Int. J. Immunogenet. 36(4):231-234(2009). XX RN [2] RP 1-1186 RA Ho C.-S., Lee Y.-J., Franzo-Romain M.H., Smith D.M.; RT ; RL Submitted (28-JAN-2008) to the INSDC. RL Department of Pathology, University of Michigan Medical School, Ann Arbor, RL MI 48109-0669, USA XX DR MD5; d1c663e9f5e6c54935baac40ed55fe4e. XX FH Key Location/Qualifiers FH FT source 1..1186 FT /organism="Sus scrofa" FT /chromosome="7" FT /mol_type="mRNA" FT /cell_line="MPK" FT /db_xref="taxon:9823" FT gene 1..1186 FT /gene="SLA-2" FT /allele="SLA-2*040202" FT CDS 5..1099 FT /codon_start=1 FT /gene="SLA-2" FT /allele="SLA-2*040202" FT /product="MHC class I antigen" FT /db_xref="GOA:Q8MHU4" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="PDB:6A6H" FT /db_xref="UniProtKB/TrEMBL:Q8MHU4" FT /protein_id="ACA21800.1" FT /translation="MRVRGPQAILILLSGALALTGTQAGPHSLRYFDTAVSRPDRGEPR FT FIEVGYVDDTQFVRFDSDAPNPRMEPRAPWIQQEGQEYWDRNTRNAMGNAQIYRGNLRT FT ALGYYNQSEAGSHTLQIMYGCDVGPDGLLLRGYSQDAYDGADYIALNEDLRSWTAADTA FT AQITKRKWEAANVAEQWRSYLQGTCVEWLQKYLQMGKDTLQRAEPPKTHVTRHPSSDLG FT VTLRCWALGFYPKEISLTWQREGQDQSQDMELVETRPSGDGTFQKWAALVVPPGEEQSY FT TCHVQHEGLQEPLTLRWDPPQPPVPIVGIIVGLVLVLVAGAVVAGVVIWRKKRSGEKGG FT SYTQAAGSDSAQGSDVSLTKDPRV" FT variation 826 FT /gene="SLA-2" FT /allele="SLA-2*040201" FT /compare=EU170458.1 XX SQ Sequence 1186 BP; 235 A; 359 C; 392 G; 200 T; 0 other; aaagatgcgg gtcagaggcc ctcaagccat cctcattctg ctgtcggggg ccctggccct 60 gaccgggacc caggcgggtc cccactccct gaggtatttc gacaccgccg tgtcccggcc 120 cgaccgcggg gagccccgtt tcatcgaagt cggctacgtg gacgacacgc agttcgtgcg 180 gttcgacagc gacgccccga atccgcggat ggagcctcgg gcgccgtgga tacagcagga 240 ggggcaggag tattgggata ggaacacgcg gaacgccatg ggcaacgcac agatttaccg 300 agggaacctg cgcacagctc tcggctacta caaccagagc gaggccgggt ctcacaccct 360 ccagatcatg tacggctgcg acgtgggacc agacgggctc ctcctccgcg ggtacagtca 420 ggacgcctac gacggcgccg attacatcgc cctgaacgag gacctgcgct cctggaccgc 480 ggcggacacg gcggctcaga tcaccaagcg caagtgggag gcggccaatg tggcggagca 540 gtggaggagc tacctgcagg gcacgtgtgt ggagtggctc cagaaatacc tgcagatggg 600 gaaggacacg ctgcagcgcg cagagcctcc aaagacacat gtgacccgcc accccagctc 660 tgacctcggg gtcaccttga ggtgctgggc cctgggcttc taccctaagg agatctccct 720 gacctggcag cgggagggcc aggaccagag ccaggacatg gagctcgtgg agaccaggcc 780 ctcaggggat gggaccttcc agaaatgggc ggccctggtg gtgccacctg gagaggagca 840 gagctacacc tgccatgtgc agcatgaggg cctgcaggag ccactcaccc tgagatggga 900 ccctcctcag ccccctgtcc ccatcgtggg catcattgtt ggcctggttc tggtcctggt 960 cgctggagcc gtggtggctg gagttgtgat ctggaggaag aagcgctcag gtgaaaaagg 1020 agggagctac actcaggctg caggcagtga cagtgcccag ggctccgatg tgtcccttac 1080 caaggatcct agagtgtgag atagctgcct tgtggggact gagtgacaca gatttgttca 1140 cgtcccactt tgtgacttcg gaaaccctgc ctcctgtttc tgcagc 1186 //