Dbfetch
ID DQ303228; SV 1; linear; mRNA; STD; MAM; 1453 BP. XX AC DQ303228; XX DT 14-DEC-2005 (Rel. 86, Created) DT 30-NOV-2006 (Rel. 89, Last updated, Version 2) XX DE Sus scrofa MHC class I antigen (SLA-1) mRNA, SLA-1*0401 allele, complete DE cds. XX KW . XX OS Sus scrofa (pig) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus. XX RN [1] RP 1-1453 RX DOI; 10.1007/s00251-006-0145-y. RX PUBMED; 17039361. RA Ho C.S., Rochelle E.S., Martens G.W., Schook L.B., Smith D.M.; RT "Characterization of swine leukocyte antigen polymorphism by sequence-based RT and PCR-SSP methods in Meishan pigs"; RL Immunogenetics 58(11):873-882(2006). XX RN [2] RP 1-1453 RA Ho C.-S., Smith D.M.; RT ; RL Submitted (23-NOV-2005) to the INSDC. RL Department of Pathology - Transplant Immunology Laboratory, Baylor RL University Medical Center, 3500 Gaston Avenue, Dallas, TX 75246, USA XX DR MD5; c179ac745ac8e4731d8d3fe5282421b3. XX FH Key Location/Qualifiers FH FT source 1..1453 FT /organism="Sus scrofa" FT /chromosome="7" FT /mol_type="mRNA" FT /note="breed: Meishan" FT /db_xref="taxon:9823" FT gene 1..1453 FT /gene="SLA-1" FT /allele="SLA-1*0401" FT /note="SLA-1*wxd" FT CDS 2..1087 FT /codon_start=1 FT /gene="SLA-1" FT /allele="SLA-1*0401" FT /product="MHC class I antigen" FT /db_xref="GOA:O19244" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="PDB:3QQ3" FT /db_xref="PDB:3QQ4" FT /db_xref="UniProtKB/TrEMBL:O19244" FT /protein_id="ABC17927.1" FT /translation="MGPGALFLLLSGTLALTGTQAGPHSLSYFYTAVSRPDRGDSRFIA FT VGYVDDTQFVRFDNYAPNPRMEPRVPWIQQEGQEYWDRETRNVKETAQTYGVGLNTLRG FT YYNQSEAGSHTLQSMYGCYLGPDGLLLHGYRQDAYDGADYIALNEDLRSWTAADMAAQI FT TKRKWEAADEAERRRSYLQGLCVESLRRYLEMGKDTLQRAEPPKTHVTRHPSSDLGVTL FT RCWALGFYPKEISLTWQREGQDQSQDMELVETRPSGDGTFQKWAALVVPPGEEQSYTCH FT VQHEGLQEPLTLRWDPAQPPVPIVGIIVGLVLVLVAGAMVAGVVIWRKTRSGEKGGSYT FT QAAGSDSDQGSDVSLTKDPRV" XX SQ Sequence 1453 BP; 280 A; 426 C; 465 G; 282 T; 0 other; catggggcct ggagccctct tcctgctgct gtcggggacc ctggccctga ccgggaccca 60 ggcgggtccc cactccctga gctatttcta caccgccgtg tcccggcccg accgcgggga 120 ctctcgcttc atcgccgtcg gctacgtgga cgacacgcag ttcgtgcggt tcgacaacta 180 cgccccgaat ccgcggatgg agcctcgggt gccgtggata cagcaggagg ggcaggagta 240 ttgggatcgg gagacgcgga atgtcaagga aaccgcacag acttacggag tgggcctgaa 300 caccctgcgc ggctactaca accagagcga ggccgggtct cacaccctcc agagcatgta 360 cggctgctac ttgggaccag acgggctcct cctccacggg tacagacagg acgcctacga 420 cggcgccgat tacatcgccc tgaacgagga cctgcgctcc tggaccgcgg cggacatggc 480 ggctcagatc accaagcgca agtgggaggc ggccgatgag gcggagcgta ggaggagcta 540 cctgcaggga ctgtgtgtgg agtcgctccg cagatacctg gagatgggga aggacacgct 600 gcagcgcgca gagcctccaa agacacatgt gacccgccac cccagctctg acctcggggt 660 caccttgagg tgctgggccc tgggcttcta ccctaaggag atctccctga cctggcagcg 720 ggagggccag gaccagagcc aggacatgga gctggtggag accaggccct caggggatgg 780 gaccttccag aagtgggcgg ccctggtggt gcctcctgga gaggagcaga gctacacctg 840 ccatgtgcag cacgagggcc tgcaggagcc cctcaccctg agatgggacc ctgctcagcc 900 ccccgtcccc atcgtgggca tcattgttgg cctggttctg gtcctggtcg ctggagccat 960 ggtggctgga gttgtgatct ggaggaagac gcgctcaggt gaaaaaggag ggagctacac 1020 tcaggctgca ggcagtgaca gtgaccaggg ctccgatgtg tcccttacca aggatcctag 1080 agtgtgagac agctgccttg tgggaactga gggacacaag atttgttcac gtcccacttt 1140 gtgaatccag atcccctgac tcctgtttct gcagctgcct ctgaaagggt ctgtgttcct 1200 atgagcatcc tgagaggagg tggggaccct ggcccccacg tcccctcctc accctgacct 1260 gtgttctctt ccatgatcct ctttccagtt cttgcaagtg ggagccgggc ggggggaggg 1320 ggggcactgg accatctcca tccttactta acttgactgc cctgagtaat gacttcctgt 1380 tgaatttgct ttttctaatt ggtgccatga ggagttgagg ggataataaa tgagagattt 1440 cctatgtttg aaa 1453 //