ID AB971355; SV 1; linear; genomic DNA; STD; HUM; 1022 BP.
XX
AC AB971355;
XX
DT 23-JUN-2014 (Rel. 121, Created)
DT 23-JUN-2014 (Rel. 121, Last updated, Version 1)
XX
DE Homo sapiens HLA-B gene for MHC class I antigen, partial cds, allele:
DE HLA-B*JRC-B-011.
XX
KW .
XX
OS Homo sapiens (human)
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
XX
RN [1]
RP 1-1022
RA Shimizu M., Nakajima F., Tadokoro K.;
RT ;
RL Submitted (18-JUN-2014) to the INSDC.
RL Contact:Marie Shimizu Japanese Red Cross Society, Central Blood Institute;
RL Tatsumi 2-1-67, Koto-ku, Tokyo 135-8521, Japan E-mail :ma-shimizu@jrc.or.jp
RL Phone :81-3-5534-7510 Fax :81-3-5534-7519
XX
RN [2]
RA Shimizu M., Nakajima F., Tadokoro K.;
RT "HLA-B*JRC-B-011";
RL Unpublished.
XX
DR MD5; d143a20ae14be914cb5a7fc81bd7a594.
DR IMGT/HLA; HLA-B*52:45; HLA13197.
XX
FH Key Location/Qualifiers
FH
FT source 1..1022
FT /organism="Homo sapiens"
FT /mol_type="genomic DNA"
FT /note="A*24:02/-,B*07:02/JRC-B-011,C*07:02/C*12:02,
FT DRB1*01:01/DRB1*15:02,DRB5*01:CGF/-,DQA1*01:MV/DQA1*01:DB,
FT DQB1*05:AMHP/DQB1*06:WPA,DPA1*01:03/DPA1*02:01,DPB1*04:02/
FT DPB1*09:01,JRC-D01-170"
FT /db_xref="taxon:9606"
FT CDS join(<1..270,371..646,747..>1022)
FT /codon_start=3
FT /transl_table=1
FT /gene="HLA-B"
FT /allele="HLA-B*JRC-B-011"
FT /product="MHC class I antigen"
FT /db_xref="InterPro:IPR001039"
FT /db_xref="InterPro:IPR003006"
FT /db_xref="InterPro:IPR003597"
FT /db_xref="InterPro:IPR007110"
FT /db_xref="InterPro:IPR011161"
FT /db_xref="InterPro:IPR011162"
FT /db_xref="InterPro:IPR013783"
FT /db_xref="InterPro:IPR036179"
FT /db_xref="InterPro:IPR037055"
FT /db_xref="UniProtKB/TrEMBL:A0A068PF82"
FT /protein_id="BAP05598.1"
FT /translation="SHSMRYFYTAMSRPGRGEPRFIAVGYVDDTQFVRFDSDAASPRTE
FT PRAPWIEQEGPEYWDRETQISKTNTQTYRENLRIALRYYNQSEAGSHTWQTMYGCDVGP
FT DGRLLRGHNQYAYDGKDYIALNEDLSSWTAADTAAQITQRKWEAAREAEQLRAYLEGLC
FT VEWLRRHLENGKERLQRADPPKTHVTHHPVSDHEATLRCWALGFYPAEITLTWQRDGED
FT QTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRW"
FT gap 271..370
FT /estimated_length=unknown
FT gap 647..746
FT /estimated_length=unknown
XX
SQ Sequence 1022 BP; 181 A; 256 C; 272 G; 113 T; 200 other;
gctcccactc catgaggtat ttctacaccg ccatgtcccg gcccggccgc ggggagcccc 60
gcttcatcgc agtgggctac gtggacgaca cccagttcgt gaggttcgac agcgacgccg 120
cgagtccgag gacggagccc cgggcgccat ggatagagca ggaggggccg gagtattggg 180
accgggagac acagatctcc aagaccaaca cacagactta ccgagagaac ctgcggatcg 240
cgctccgcta ctacaaccag agcgaggccg nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 300
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 360
nnnnnnnnnn ggtctcacac ttggcagacg atgtatggct gcgacgtggg gccggacggg 420
cgcctcctcc gcgggcataa ccagtacgcc tacgacggca aagattacat cgccctgaac 480
gaggacctga gctcctggac cgcggcggac accgcggctc agatcaccca gcgcaagtgg 540
gaggcggccc gtgaggcgga gcagctgaga gcctacctgg agggcctgtg cgtggagtgg 600
ctccgcagac acctggagaa cgggaaggag aggctgcagc gcgcggnnnn nnnnnnnnnn 660
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 720
nnnnnnnnnn nnnnnnnnnn nnnnnnaccc cccaaagaca cacgtgaccc accaccccgt 780
ctctgaccat gaggccaccc tgaggtgctg ggccctgggc ttctaccctg cggagatcac 840
actgacctgg cagcgggatg gcgaggacca aactcaggac actgagcttg tggagaccag 900
accagcagga gatagaacct tccagaagtg ggcagctgtg gtggtgcctt ctggagaaga 960
gcagagatac acatgccatg tacagcatga ggggctgccg aagcccctca ccctgagatg 1020
gg 1022
//