Dbfetch

Dbfetch

ID   AB105379; SV 1; linear; mRNA; STD; MAM; 509 BP.
XX
AC   AB105379;
XX
DT   07-AUG-2003 (Rel. 76, Created)
DT   19-DEC-2003 (Rel. 78, Last updated, Version 2)
XX
DE   Sus scrofa SLA-1 mRNA for MHC class I antigen, partial cds,
DE   allele:SLA-1*01.
XX
KW   .
XX
OS   Sus scrofa (pig)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus.
XX
RN   [1]
RP   1-509
RA   Ando A., Inoko H.;
RT   ;
RL   Submitted (11-MAR-2003) to the INSDC.
RL   Asako Ando, Tokai University School of Medicine, Dept. of Molecular Life
RL   Science; Bohseidai, Isehara, Kanagawa 259-1193, Japan
RL   (E-mail:aando@is.icc.u-tokai.ac.jp, Tel:81-463-93-1121(ex.2586),
RL   Fax:81-463-94-8884)
XX
RN   [2]
RX   DOI; 10.1007/s00251-003-0619-0.
RX   PUBMED; 14605775.
RA   Ando A., Kawata H., Shigenari A., Anzai T., Ota M., Katsuyama Y., Sada M.,
RA   Goto R., Takeshima S., Aida Y., Iwanaga T., Fujimura N., Suzuki Y.,
RA   Gojobori T., Inoko H.;
RT   "Genetic polymorphism of the swine major histocompatibility complex ( SLA)
RT   class I genes, SLA-1, -2 and -3";
RL   Immunogenetics 55(9):583-593(2003).
XX
DR   MD5; 91318b4d05a18f1856455aa2499ef7a0.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..509
FT                   /organism="Sus scrofa"
FT                   /chromosome="7"
FT                   /mol_type="mRNA"
FT                   /note="breed: Mexican hairless"
FT                   /db_xref="taxon:9823"
FT   CDS             <1..>507
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="SLA-1"
FT                   /allele="SLA-1*01"
FT                   /product="MHC class I antigen"
FT                   /db_xref="InterPro:IPR001039"
FT                   /db_xref="InterPro:IPR011161"
FT                   /db_xref="InterPro:IPR011162"
FT                   /db_xref="InterPro:IPR037055"
FT                   /db_xref="UniProtKB/TrEMBL:Q7YP02"
FT                   /protein_id="BAC81551.1"
FT                   /translation="GTLALTGTQAGPHSLSYFYTAVSRPDRGDSRFFIVGYVDDTQFVR
FT                   FDSDAPNPRMEPRAPWIQQEGQDYWDRETQIQRDTSQTYRVGLKNLRGYYNQSEAGSHT
FT                   LQWMYGCYLGPDGLLLRGYSQDAYDGADYIALNEDLRSWTAADMAAQITKRKWEAADAA
FT                   EQMRSY"
XX
SQ   Sequence 509 BP; 101 A; 167 C; 166 G; 75 T; 0 other;
     gggaccctgg ccctgaccgg gacccaggcg ggtccccact ccctgagcta tttctacacc        60
     gccgtgtccc ggcccgaccg cggggactcc cgcttcttca ttgtcggcta cgtggacgac       120
     acgcagttcg tgcggttcga cagcgacgcc cccaatccgc ggatggagcc gcgggcgccg       180
     tggatacagc aggaggggca ggactattgg gatcgggaga cgcagataca aagggacacc       240
     tcacagactt accgagtggg cctgaagaac ctgcgcggct actacaacca gagcgaggcc       300
     gggtctcaca ccctccagtg gatgtacggc tgctacttgg gaccagacgg gctcctcctc       360
     cgcgggtaca gtcaggacgc ctacgacggc gccgattaca tcgccctgaa cgaggacctg       420
     cgctcctgga ccgcggcgga catggcggct cagatcacca agcgcaagtg ggaggcggcc       480
     gatgcggcgg agcaaatgag aagctacct                                         509
//