IHECRE00003844.3 PREVIOUS JSON  


Type Single donor
Status Partial
Project CEEHRC
Description Sample AML_76-51/CEMT0167
Live version IHECRE00003844.4
Previous versions IHECRE00003844.2   IHECRE00003844.1  

Metadata


Biomaterial type Primary Tissue
Donor id AML_76-51
Disease ontology uri https://ncim.nci.nih.gov/ncimbrowser/ConceptReport.jsp?dictionary=NCI%20Metathesaurus&code=C0023467
Validated against metadata spec 1.0/SAMPLE
Donor life stage adult
Donor ethnicity unknown
Donor sex Male
Subject id CEMT0167
Gender male
Donor age unit year
Tissue type Bone marrow - mononuclear cells
Taxon id 9606
Species Homo sapiens
Sample ontology uri http://purl.obolibrary.org/obo/UBERON_0002371
Disease Acute Myeloid Leukemia
Donor age 45
Collection method aspiration biopsy (biomaterial frozen afterwards)
Donor health status ontology uri https://ncim.nci.nih.gov/ncimbrowser/ConceptReport.jsp?dictionary=NCI%20Metathesaurus&code=C0023467
Phenotype https://ncim.nci.nih.gov/ncimbrowser/ConceptReport.jsp?dictionary=NCI%20Metathesaurus&code=C0023467
Sample id CEMT0167
Tissue depot iliac (hip) bone
Biomaterial provider Karsan lab
Donor health status Acute Myeloid Leukemia
Submission alias CEMT0167.DNA_RNA:AML_76-51

Raw data


Assay Type Experiment Type Archive Primary ID Secondary ID URL
ChIP-Seq ChIP-Seq Input EGA EGAX00001645049 EGAD00001004950 https://ega-archive.org/datasets/EGAD00001004950
ChIP-Seq Histone H3K27ac EGA EGAX00001645019 EGAD00001004950 https://ega-archive.org/datasets/EGAD00001004950
ChIP-Seq Histone H3K9me3 EGA EGAX00001645041 EGAD00001004950 https://ega-archive.org/datasets/EGAD00001004950
ChIP-Seq Histone H3K36me3 EGA EGAX00001645011 EGAD00001004950 https://ega-archive.org/datasets/EGAD00001004950
PBAL (Post Bisulfite Adapter Ligation) DNA Methylation EGA EGAX00001918894 EGAD00001004950 https://ega-archive.org/datasets/EGAD00001004950
ChIP-Seq Histone H3K27me3 EGA EGAX00001644958 EGAD00001004950 https://ega-archive.org/datasets/EGAD00001004950
ChIP-Seq Histone H3K4me1 EGA EGAX00001644960 EGAD00001004950 https://ega-archive.org/datasets/EGAD00001004950
ChIP-Seq Histone H3K4me3 EGA EGAX00001644980 EGAD00001004950 https://ega-archive.org/datasets/EGAD00001004950