IHECRE00003812.1 LIVE JSON  


Type Single donor
Status Complete
Project DEEP
Description DEEP ID: 52_Hf3b_CoMu_UC, EGA sample: EGAN00001619716

Metadata


Biomaterial type primary tissue
Donor id 52_Hf3b
Comments discordant Twin to 52_Hf3a_CoMu_Ct
Subject id 52_Hf3b
Disease ontology DOID:8577
Pool no
Gender female
Tissue type mucosa of large intestine
Donor age unit year
Taxon id 9606
Species Homo sapiens
Disease ulcerative colitis
Donor age 18
Phenotype ulcerative colitis
Cell type mucosa
Tissue depot sigma
Donor health status Mesazilin 3 g

Raw data


Assay Type Experiment Type Archive Primary ID Secondary ID URL
ncRNA-Seq smRNA-seq EGA EGAX00001612138 EGAD00001003974 https://ega-archive.org/datasets/EGAD00001003974
ChIP-Seq Histone H3K36me3 EGA EGAX00001612146 EGAD00001003974 https://ega-archive.org/datasets/EGAD00001003974
Bisulfite-Seq DNA methylation EGA EGAX00001612202 EGAD00001003974 https://ega-archive.org/datasets/EGAD00001003974
ChIP-Seq Histone H3K27me3 EGA EGAX00001612222 EGAD00001003974 https://ega-archive.org/datasets/EGAD00001003974
Bisulfite-Seq DNA methylation EGA EGAX00001612254 EGAD00001003974 https://ega-archive.org/datasets/EGAD00001003974
OTHER NOMe seq EGA EGAX00001612256 EGAD00001003974 https://ega-archive.org/datasets/EGAD00001003974
ChIP-Seq Histone H3K27ac EGA EGAX00001612278 EGAD00001003974 https://ega-archive.org/datasets/EGAD00001003974
ChIP-Seq ChIP-Seq Input EGA EGAX00001612289 EGAD00001003974 https://ega-archive.org/datasets/EGAD00001003974
ChIP-Seq Histone H3K27ac EGA EGAX00001612294 EGAD00001003974 https://ega-archive.org/datasets/EGAD00001003974
ChIP-Seq Histone H3K4me3 EGA EGAX00001612301 EGAD00001003974 https://ega-archive.org/datasets/EGAD00001003974
RNA-Seq total-RNA-seq EGA EGAX00001612322 EGAD00001003974 https://ega-archive.org/datasets/EGAD00001003974
ChIP-Seq Histone H3K4me1 EGA EGAX00001612364 EGAD00001003974 https://ega-archive.org/datasets/EGAD00001003974
ChIP-Seq Histone H3K36me3 EGA EGAX00001612365 EGAD00001003974 https://ega-archive.org/datasets/EGAD00001003974
RNA-Seq mRNA-seq EGA EGAX00001612369 EGAD00001003974 https://ega-archive.org/datasets/EGAD00001003974
Bisulfite-Seq DNA methylation EGA EGAX00001612370 EGAD00001003974 https://ega-archive.org/datasets/EGAD00001003974
OTHER NOMe seq EGA EGAX00001612401 EGAD00001003974 https://ega-archive.org/datasets/EGAD00001003974
ChIP-Seq Histone H3K4me3 EGA EGAX00001612410 EGAD00001003974 https://ega-archive.org/datasets/EGAD00001003974
ChIP-Seq Histone H3K9me3 EGA EGAX00001612415 EGAD00001003974 https://ega-archive.org/datasets/EGAD00001003974
ChIP-Seq ChIP-Seq Input EGA EGAX00001612416 EGAD00001003974 https://ega-archive.org/datasets/EGAD00001003974
ChIP-Seq Histone H3K9me3 EGA EGAX00001612424 EGAD00001003974 https://ega-archive.org/datasets/EGAD00001003974
ChIP-Seq Histone H3K27me3 EGA EGAX00001612440 EGAD00001003974 https://ega-archive.org/datasets/EGAD00001003974
ChIP-Seq Histone H3K4me1 EGA EGAX00001612454 EGAD00001003974 https://ega-archive.org/datasets/EGAD00001003974